Newly Characterized Genes

CHECK HERE FOR DESCRIPTIONS OF NEWLY CHARACTERIZED MAIZE GENES!

With the overwhelming number of genes that are being discovered by phenotypic and sequence analyses, the MaizeGDB staff is missing some that should be included in MaizeGDB. We need your help! Please let us know about new genes that you're working on or have recently read about.

MaizeGDB prefers not to assign formal gene names to gene models based purely on orthology. Known difficulties include inclusivity (there are over 10,000 functionally characterized Arabidopsis genes)* and some likelihood of errors in inferred functions. Unlike gene models, gene names are generally conserved unless differently named genes are found to be allelic. Of particular note, naming priveleges are customarily held by researchers who first confirm function.

We encourage researchers to use the annotation tool on the MaizeGDB gene model pages to add their insights about putative function, especially when not currently part of the Phytozome or Gramene pipelines.

Below is a list of newly reported or newly characterized genes (new reference, new gene product, and/or new variation) with which you may not yet be familiar. The genes are sorted by the last time the gene has been updated. To suggest genes for inclusion in this list, email us and include the gene name, full name, chromosome or bin, and a recent reference.

If you cannot find the gene you would like to recommend in the database, send us an email so that we can add it to the database!

This page is based on our monthly release. The updates are made around 4:00am CST.


         Recommended Genes


Most recent data | Six months | One year | All time

New or updated genes since 2003. The cutoff date is August 1st, 2003.

Last UpdateGeneFull Name : DescriptionChromosome
or Bin
Gene
Model
Recent ReferenceOrthologsUpdate information
yesterdaytlc14 TRAM/LAG/CRN8 14: encodes a TLC (TRAM/LAG/CRN8) domain protein
8.01
GRMZM2G020148
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Variation: September 1st, 2003
Gene Model: September 14th, 2018
yesterdaytlc17 TRAM/LAG/CRN8 17: encodes a TLC (TRAM/LAG/CRN8) domain protein
8.08
GRMZM5G825226
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: September 2nd, 2018
yesterdaytlc6 TRAM/LAG/CRN8 6: encodes a TLC (TRAM/LAG/CRN8) domain protein
3.06
GRMZM2G077279
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
yesterdaytlc7 TRAM/LAG/CRN8 7: encodes a TLC (TRAM/LAG/CRN8) domain protein
3.06
GRMZM2G021589
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
yesterdaytlc1 TRAM/LAG/CRN8 1: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
GRMZM2G151521
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
yesterdaytlc2 TRAM/LAG/CRN8 2: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
GRMZM2G429128
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
yesterdaytlc3 TRAM/LAG/CRN8 3: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
GRMZM2G138330
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
yesterdaytlc4 TRAM/LAG/CRN8 4: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
GRMZM2G132084
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
yesterdaytlc5 TRAM/LAG/CRN8 5: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
GRMZM2G163426
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
yesterdaytlc8 TRAM/LAG/CRN8 8: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
GRMZM2G170868
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
yesterdaytlc9 TRAM/LAG/CRN8 9: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
AC210013.4_FG012
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
yesterdaytlc11 TRAM/LAG/CRN8 11: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
GRMZM2G444643
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
yesterdaytlc12 TRAM/LAG/CRN8 12: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
GRMZM2G315726
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
yesterdaytlc13 TRAM/LAG/CRN8 13: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
GRMZM2G016551
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
yesterdaytlc15 TRAM/LAG/CRN8 15: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
   Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
yesterdaytlc16 TRAM/LAG/CRN8 16: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
GRMZM2G075023
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
yesterdaytlc18 TRAM/LAG/CRN8 18: encodes a TLC (TRAM/LAG/CRN8) domain protein
 
GRMZM2G083427
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
yesterdaytlc10 TRAM/LAG/CRN8 10: encodes a TLC (TRAM/LAG/CRN8) domain protein
5.02
GRMZM2G016184
Si, WN et al. 2019. Int J Mol Sci 20:5484     Reference: November 4th, 2019
Gene Product: November 4th, 2019
Gene Model: November 4th, 2019
3 days agomterf10 mTERF domain protein10: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yang, Y-Z et al. 2019. Plant Cell Physiol pp.doi: 10.1093/pcp/pcz204     Reference: November 2nd, 2019
Gene Product: February 19th, 2015
Variation: June 14th, 2019
3 days agoppr20 pentatricopeptide repeat 20: mutants arrest maize seed development; display slow embryo and endosperm development
 
GRMZM5G818978
Yang, Y-Z et al. 2019. Plant Cell Physiol pp.doi: 10.1093/pcp/pcz204     Reference: November 2nd, 2019
Gene Product: December 27th, 2016
Variation: November 2nd, 2019
Gene Model: November 2nd, 2019
3 days agovte4 vitamin E synthesis4:
5.06
GRMZM2G035213
Zhang, L et al. 2019. Transgenic Research pp.doi: 10.1007/s11248-019-00180-z     Reference: November 2nd, 2019
Gene Product: June 26th, 2013
Gene Model: June 26th, 2013
6 days agobd1 branched silkless1: ear silkless with indeterminate branches at base; tassel proliferated, bushy
7.05
GRMZM2G307119
Leiboff, S; Hake, S. 2019. Curr Biol. 0:doi: 10.1016/j.cub.2019.08.044   At5g18560 (TAIR)
LOC_Os01g21820 (MSU/TIGR)
Os07g0669500 (Gramene)
Reference: October 30th, 2019
Gene Product: July 27th, 2009
Variation: August 13th, 2011
Gene Model: July 14th, 2011
6 days agopan1 pangloss1: Defines polarization in divisions of subsidiary mother cells at guard cells
 
GRMZM5G836190
Doblas-Ibanez, P et al. 2019. Mol Plant-Microbe Interact pp.doi: 10.1094/MPMI-05-19-0129-R     Reference: October 30th, 2019
Gene Product: November 27th, 2012
Variation: July 11th, 2014
Gene Model: November 2nd, 2011
6 days agora1 ramosa1: ear and tassel many-branched; tassel branches taper to tip
7.02
   Leiboff, S; Hake, S. 2019. Curr Biol. 0:doi: 10.1016/j.cub.2019.08.044     Reference: October 30th, 2019
Gene Product: April 11th, 2007
Variation: August 20th, 2010
6 days agose1 sugary-enhancer1: high sugar content with su1; light yellow endosperm; freely wrinkled in Ill677a
2.10 - 2.10
AC217415.3_FG004
Zhang, X, et al. 2019. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.1902747116     Reference: October 30th, 2019
Gene Product: September 24th, 2019
Variation: May 4th, 2015
Gene Model: May 2nd, 2015
6 days agoub2 unbranched2: double mutant shows decrease in tassel branch number
 
   Leiboff, S; Hake, S. 2019. Curr Biol. 0:doi: 10.1016/j.cub.2019.08.044     Reference: October 30th, 2019
Gene Product: July 5th, 2019
Variation: December 17th, 2014
6 days agofea4 fasciated ear4: Mutants are semidwarfed with fasciated ears and tassels as well as greatly enlarged vegetative and inflorescence meristems.
 
   Leiboff, S; Hake, S. 2019. Curr Biol. 0:doi: 10.1016/j.cub.2019.08.044     Reference: October 30th, 2019
Gene Product: August 21st, 2018
Variation: July 7th, 2017
6 days agobde1 bearded-ear1: floral development MADS box transcription factor; recessive mutant has silky-polytypic-like ear
5.06
   Leiboff, S; Hake, S. 2019. Curr Biol. 0:doi: 10.1016/j.cub.2019.08.044   AT2G45650 (TAIR) Reference: October 30th, 2019
Gene Product: April 1st, 2011
Variation: October 5th, 2009
6 days agozag1 Zea AGAMOUS homolog1: amino acid sequence, deduced from cDNA to inflorescence mRNA, 61% identical to Arabidopsis floral homeotic gene protein AG1; expression strong in female inflorescence; possibly pt1; SSR umc1187
6.05
   Leiboff, S; Hake, S. 2019. Curr Biol. 0:doi: 10.1016/j.cub.2019.08.044     Reference: October 30th, 2019
Gene Product: September 1st, 2003
Variation: January 2nd, 2015
7 days agowrky67 WRKY-transcription factor 67: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Bo, C et al. 2019. Plant Cell Rep pp.doi: 10.1007/s00299-019-02481-3     Reference: October 29th, 2019
Gene Product: July 24th, 2017
11 days agorafs1 raffinose synthase1: mutants have significantly reduced seed vigor
3.03
GRMZM2G150906
Han, QH et al. 2019. Plant Cell Physiol pp.doi: 10.1093/pcp/pcz200     Reference: October 23rd, 2019
Gene Product: October 25th, 2019
Variation: March 23rd, 2018
Gene Model: March 23rd, 2018
11 days agorafs2 raffinose synthase2:
 
GRMZM2G050177
Li, T et al. 2017. Molecular Plant 10:1540-1555     Reference: March 1st, 2018
Gene Product: October 25th, 2019
Gene Model: March 1st, 2018
11 days agorafs3 raffinose synthase3:
 
   Li, T et al. 2017. Molecular Plant 10:1540-1555     Reference: March 1st, 2018
Gene Product: October 25th, 2019
11 days agommt1 methionine S-methyltransferase1:
8.05
GRMZM2G098031
Bourgis, F. 1999. Plant Cell. 11:1485-1498     Reference: July 19th, 2004
Gene Product: October 25th, 2019
Variation: September 20th, 2018
Gene Model: September 20th, 2018
12 days agorap2 rap2.7 orthologue: negative regulator of flowering time; vgt1 acts as an enhancer (Salvi et al. 2007)
8.06
GRMZM2G700665
Azodi, CB et al. 2019. Plant Cell pp.doi: 10.1105/tpc.19.00332     Reference: October 24th, 2019
Gene Product: July 5th, 2019
Variation: July 24th, 2019
Gene Model: November 20th, 2012
12 days agopebp2 phosphatidylethanolamine-binding protein2:
 
   Azodi, CB et al. 2019. Plant Cell pp.doi: 10.1105/tpc.19.00332     Reference: October 24th, 2019
Variation: December 15th, 2010
12 days agopebp4 phosphatidylethanolamine-binding protein4:
 
   Azodi, CB et al. 2019. Plant Cell pp.doi: 10.1105/tpc.19.00332     Reference: October 24th, 2019
Variation: December 15th, 2010
12 days agopebp5 phosphatidylethanolamine-binding protein:
 
   Azodi, CB et al. 2019. Plant Cell pp.doi: 10.1105/tpc.19.00332     Reference: October 24th, 2019
Variation: January 31st, 2011
12 days agopebp8 phosphatidylethanolamine-binding protein8: florigen activity: complements Arabidopsis FT mutants, promoting flowering at short days. Requires functional id1 gene.(Lazakis et al 2011)
 
GRMZM2G179264
Azodi, CB et al. 2019. Plant Cell pp.doi: 10.1105/tpc.19.00332     Reference: October 24th, 2019
Gene Product: May 6th, 2011
Variation: June 19th, 2015
Gene Model: May 6th, 2011
12 days agopebp24 phosphatidylethanolamine-binding protein24:
 
GRMZM2G440005
Azodi, CB et al. 2019. Plant Cell pp.doi: 10.1105/tpc.19.00332     Reference: October 24th, 2019
Variation: December 14th, 2010
Gene Model: July 28th, 2016
12 days agoid1 indeterminate growth1: requires extended growth for flowering; vegetatively totipotent with gt1 and factors for perennialism
1.08
   Azodi, CB et al. 2019. Plant Cell pp.doi: 10.1105/tpc.19.00332     Reference: October 24th, 2019
Gene Product: January 3rd, 2015
Variation: August 3rd, 2015
12 days agocct1 CO CO-LIKE TIMING OF CAB1 protein domain1: photoperiod response locus; confers later flowering in teosintes under longer day lengths; many maize inbred lines, including some adapted to tropical regions, have cct1 alleles insensitive to photoperiod (Hung et al 2012)
 
GRMZM2G381691
Azodi, CB et al. 2019. Plant Cell pp.doi: 10.1105/tpc.19.00332   AT5G24930 (TAIR)
LOC_Os07g15770 (MSU/TIGR)
Os07g0261200 (Gramene)
Reference: October 24th, 2019
Gene Product: June 18th, 2018
Variation: December 27th, 2017
Gene Model: July 17th, 2012
12 days agomads69 MADS-transcription factor 69: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.contributes to natural variation in flowering time in maize
 
   Azodi, CB et al. 2019. Plant Cell pp.doi: 10.1105/tpc.19.00332     Reference: October 24th, 2019
Variation: October 5th, 2018
12 days agodlf1 delayed flowering1: tall late plant with additional nodes and leaves at flowering; no apparent response to day length
 
   Azodi, CB et al. 2019. Plant Cell pp.doi: 10.1105/tpc.19.00332     Reference: October 24th, 2019
Gene Product: August 21st, 2018
Variation: February 6th, 2011
12 days agomads1 MADS1: transcripts detected in egg cells and invivo zygotes of maize, also expressed in synergids and antipodal cells. during flower development expressed in all ear spikelet organ primordia at intermediate stages
9.07
   Azodi, CB et al. 2019. Plant Cell pp.doi: 10.1105/tpc.19.00332     Reference: October 24th, 2019
Gene Product: September 1st, 2003
Variation: April 15th, 2008
12 days agozag6 agamous-like6: Encodes a MADS-box transcription factor homologous to SUPPRESSOR OF OVEREXPRESSION OF CONSTANS 1 that affects flowering time in Arabidopsis.
 
GRMZM2G026223
Azodi, CB et al. 2019. Plant Cell pp.doi: 10.1105/tpc.19.00332     Reference: October 24th, 2019
Variation: June 9th, 2014
Gene Model: June 9th, 2014
12 days agocyc10 cyclin10: Associates to cyclin dependent kinase proteins during germination and the complexes formed develop kinase activity.
 
GRMZM2G107377
Qiao, P et al. 2019. G3 pp.doi: 10.1534/g3.119.400757     Reference: October 24th, 2019
Gene Product: June 26th, 2009
Variation: December 21st, 2016
Gene Model: December 21st, 2016
12 days agocct2 CO CO-LIKE TIMING OF CAB1 protein domain2: photoperiod response locus; confers later flowering in teosintes under longer day lengths; knockout mutant causes early flowering under long days
 
GRMZM2G004483
Azodi, CB et al. 2019. Plant Cell pp.doi: 10.1105/tpc.19.00332     Reference: October 24th, 2019
Gene Product: June 18th, 2018
Variation: December 27th, 2017
Gene Model: December 27th, 2017
13 days agoaasr5 abscisic acid stress ripening5:
10.04
GRMZM2G052100
Han, QH et al. 2019. Plant Cell Physiol pp.doi: 10.1093/pcp/pcz200     Reference: October 23rd, 2019
Gene Product: November 4th, 2011
Variation: April 14th, 2007
Gene Model: November 1st, 2011
13 days agoga2ox12 gibberellin 2-oxidase12:
 
GRMZM2G177104
Zhang, Y et al. 2019. Plants doi: 10.3390/plants8100432     Reference: October 23rd, 2019
Gene Product: October 27th, 2014
Gene Model: October 30th, 2014
13 days agohma6 heavy metal ATPase6:
4.08
GRMZM2G315931
Cao, YH et al. 2019. PeerJ doi: 10.7717/peerj.7877     Reference: October 23rd, 2019
Gene Product: October 23rd, 2019
Gene Model: October 23rd, 2019
13 days agohma3 heavy metal ATPase3: associated with leaf Cd concentration under various Cd levels at seedling and maturing stages
 
GRMZM2G175576
Cao, YH et al. 2019. PeerJ doi: 10.7717/peerj.7877     Reference: October 23rd, 2019
Gene Product: October 23rd, 2019
Gene Model: January 27th, 2018
13 days agohma4 heavy metal ATPase4:
 
GRMZM2G455491
Cao, YH et al. 2019. PeerJ doi: 10.7717/peerj.7877     Reference: October 23rd, 2019
Gene Product: October 23rd, 2019
Gene Model: January 27th, 2018
13 days agohma2 heavy metal ATPase2: associated with leaf Cd concentration under low Cd condition at the seedling stage
 
GRMZM2G099191
Cao, YH et al. 2019. PeerJ doi: 10.7717/peerj.7877     Reference: October 23rd, 2019
Gene Product: October 23rd, 2019
Gene Model: October 23rd, 2019
13 days agohma1 heavy metal ATPase1:
 
GRMZM2G067853
Cao, YH et al. 2019. PeerJ doi: 10.7717/peerj.7877     Reference: October 23rd, 2019
Gene Product: October 23rd, 2019
Gene Model: October 23rd, 2019
13 days agohma5 heavy metal ATPase5:
 
GRMZM2G144083
Cao, YH et al. 2019. PeerJ doi: 10.7717/peerj.7877     Reference: October 23rd, 2019
Gene Product: October 23rd, 2019
Gene Model: October 23rd, 2019
13 days agohma7 heavy metal ATPase7:
 
GRMZM2G029951
Cao, YH et al. 2019. PeerJ doi: 10.7717/peerj.7877     Reference: October 23rd, 2019
Gene Product: October 23rd, 2019
Gene Model: October 23rd, 2019
13 days agohma8 heavy metal ATPase8:
 
GRMZM5G855347
Cao, YH et al. 2019. PeerJ doi: 10.7717/peerj.7877     Reference: October 23rd, 2019
Gene Product: October 23rd, 2019
Gene Model: October 23rd, 2019
13 days agohma9 heavy metal ATPase9:
 
GRMZM2G151406
Cao, YH et al. 2019. PeerJ doi: 10.7717/peerj.7877     Reference: October 23rd, 2019
Gene Product: October 23rd, 2019
Gene Model: October 23rd, 2019
13 days agohma10 heavy metal ATPase10:
 
GRMZM2G143512
Cao, YH et al. 2019. PeerJ doi: 10.7717/peerj.7877     Reference: October 23rd, 2019
Gene Product: October 23rd, 2019
Gene Model: October 23rd, 2019
13 days agohma11 heavy metal ATPase11:
 
GRMZM2G010152
Cao, YH et al. 2019. PeerJ doi: 10.7717/peerj.7877     Reference: October 23rd, 2019
Gene Product: October 23rd, 2019
Gene Model: October 23rd, 2019
13 days agodbf3 DRE-binding protein3: regulates rafs1 expression and raffinose biosynthesis and plant chilling stress tolerance
2.07
   Han, QH et al. 2019. Plant Cell Physiol pp.doi: 10.1093/pcp/pcz200     Reference: October 23rd, 2019
Gene Product: April 10th, 2013
Variation: October 23rd, 2019
15 days agopin9 PIN-formed protein9: similar to Arabidopsis PIN9 (Forestan et al 2012)
3.06
GRMZM5G859099
Wang, X et al. 2019. Ann Bot pp.doi: 10.1093/aob/mcz154     Reference: October 21st, 2019
Gene Product: April 21st, 2014
Gene Model: January 24th, 2013
15 days agocyc3 cyclin3: classIII; sense RNA functions in Xenopus oocytes; SSR umc1186
6.02
   Wang, X et al. 2019. Ann Bot pp.doi: 10.1093/aob/mcz154     Reference: October 21st, 2019
Gene Product: June 26th, 2009
Variation: January 17th, 2014
15 days agocyc7 cyclin7: Class I; sense RNA functions in Xenopus oocytes
3.06
GRMZM2G073003
Wang, X et al. 2019. Ann Bot pp.doi: 10.1093/aob/mcz154     Reference: October 21st, 2019
Gene Product: June 26th, 2009
Variation: October 23rd, 2012
Gene Model: August 16th, 2019
15 days agotir1 transport inhibitor response1: encodes a member of a class of F-BOX proteins shown to bind auxin and facilitate degradation of the transcriptional repressor Aux/IAA proteins
 
GRMZM2G135978
Wang, X et al. 2019. Ann Bot pp.doi: 10.1093/aob/mcz154   LOC_Os05g05800 (MSU/TIGR)
Os05g0150500 (Gramene)
Reference: October 21st, 2019
Gene Product: July 25th, 2017
Gene Model: December 28th, 2018
15 days agoaas8 auxin amido synthetase8: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G053338
Feng, SG et al. 2014. J Integr Plant Biol 57:783-795     Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
15 days agoaas1 auxin amido synthetase1: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G068701
Feng, SG et al. 2014. J Integr Plant Biol 57:783-795     Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
15 days agoaas2 auxin amido synthetase2: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G378106
Wang, X et al. 2019. Ann Bot pp.doi: 10.1093/aob/mcz154     Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
15 days agoaas3 auxin amido synthetase3: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G410567
Feng, SG et al. 2014. J Integr Plant Biol 57:783-795   AT1G28130 (TAIR) Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
15 days agoaas4 auxin amido synthetase4: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G061005
Feng, SG et al. 2014. J Integr Plant Biol 57:783-795     Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
15 days agoaas5 auxin amido synthetase5: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G060991
Feng, SG et al. 2014. J Integr Plant Biol 57:783-795     Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
15 days agoaas6 auxin amido synthetase6: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G061515
Feng, SG et al. 2014. J Integr Plant Biol 57:783-795     Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
15 days agoaas7 auxin amido synthetase7: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G033359
Feng, SG et al. 2014. J Integr Plant Biol 57:783-795     Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
15 days agoaas9 auxin amido synthetase9: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G414460
Feng, SG et al. 2014. J Integr Plant Biol 57:783-795   AT2G47750 (TAIR) Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
15 days agoaas11 auxin amido synthetase11: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G162413
Feng, SG et al. 2014. J Integr Plant Biol 57:783-795     Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
15 days agoaas12 auxin amido synthetase12: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G366873
Feng, SG et al. 2014. J Integr Plant Biol 57:783-795     Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
15 days agoaas13 auxin amido synthetase13: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G091276
Feng, SG et al. 2014. J Integr Plant Biol 57:783-795     Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
15 days agoaas10 auxin amido synthetase10: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
8.03
GRMZM2G001421
Feng, SG et al. 2014. J Integr Plant Biol 57:783-795     Reference: October 21st, 2019
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
15 days agopin1 PIN-formed protein1: gene product cross-reacts with anti-AtPIN1 antibody and in tassel and ear, the PIN proteins are localized to a group of cells in subepidermal meristematic layers.
9.01
GRMZM2G398650
Wang, X et al. 2019. Ann Bot pp.doi: 10.1093/aob/mcz154     Reference: October 21st, 2019
Gene Product: April 21st, 2014
Variation: January 20th, 2015
Gene Model: June 7th, 2012
17 days agovpp8 vacuolar proton pump8: encodes a vacuolar H+-ATPase subunit
7.04
GRMZM2G019999
Kang, C et al. 2019. Int J Mol Sci 20:E5125     Reference: October 19th, 2019
Gene Product: September 1st, 2003
Gene Model: August 25th, 2018
17 days agovpp10 vacuolar proton pump10: encodes a vacuolar H+-ATPase subunit
 
GRMZM2G163233
Kang, C et al. 2019. Int J Mol Sci 20:E5125     Reference: October 19th, 2019
Gene Product: September 1st, 2003
Gene Model: October 19th, 2019
19 days agonactf87 NAC-transcription factor 87: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jimenez-Galindo, JC et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-2052-z     Reference: October 17th, 2019
Gene Product: July 8th, 2019
19 days agolac2 laccase2:
6.05
GRMZM2G146152
Jimenez-Galindo, JC et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-2052-z     Reference: October 17th, 2019
Gene Product: March 31st, 2018
Gene Model: August 28th, 2018
20 days agoclt1 clumped tassel1: dominant Clt1 plants have variable dwarfing, developmental anomalies
8.06 - 8.06
GRMZM2G017305
Lau, KH. 2016. Co-orthologs of KATANIN1 impact plant morphology and show differential evolution in maize. Ph.D. dissertation, Purdue University, 145pp     Reference: October 15th, 2019
Gene Product: October 15th, 2019
Variation: October 16th, 2019
Gene Model: October 15th, 2019
21 days agoufg25  : Candidate for kernel row number trait (qKRN5b)
5.01
GRMZM2G094900
Shen, XM et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03436-8     Reference: October 15th, 2019
Variation: October 15th, 2019
Gene Model: June 16th, 2018
21 days agoktn2 katanin2: paralog of clt1
 
GRMZM2G054663
Lau, KH. 2016. Co-orthologs of KATANIN1 impact plant morphology and show differential evolution in maize. Ph.D. dissertation, Purdue University, 145pp     Reference: October 15th, 2019
Gene Product: October 15th, 2019
Variation: October 15th, 2019
Gene Model: October 15th, 2019
28 days agotcptf39 TCP-transcription factor 39: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Gyawali, A et al. 2019. BMC Plant Biology 19:412     Reference: October 8th, 2019
Gene Product: September 27th, 2019
29 days agostk2 serine-threonine kinase2: Sequence orthologous to rice stk2, in maize BAC contig overlapping b0178I03 and b0004G18 (Alleman 2006)
2.04
GRMZM2G179268
Javeed, A et al. 2019. Applied Ecology and Environmental Research 17:1789-11802     Reference: October 7th, 2019
Gene Product: May 13th, 2014
Gene Model: January 9th, 2017
Recommended by Ed Coe:
May 1st, 2007
29 days agoae1 amylose extender1: glassy, tarnished endosperm; high amylose content; application: highly linear starch is used for food films, fibers, and other industrial purposes
5.04
   Tracy, WF et al. 2020. Plant Breed Rev 43:215-241     Reference: October 7th, 2019
Gene Product: June 6th, 2011
Variation: January 29th, 2018
29 days agoafd1 absence of first division1: male and female sterility; early meiosis
6.07
GRMZM2G059037
Dukowic-Schulze, S et al. 2014. BMC Plant Biology 14:118   AT5G05490 (TAIR)
LOC_Os05g50410 (MSU/TIGR)
Os05g0580500 (Gramene)
Reference: October 7th, 2019
Gene Product: July 30th, 2009
Variation: August 11th, 2011
Gene Model: July 14th, 2011
29 days agobt1 brittle endosperm1: mature kernel collapsed, angular, often translucent and brittle (alleles sh3, sh5)
5.04
   Tracy, WF et al. 2020. Plant Breed Rev 43:215-241     Reference: October 7th, 2019
Gene Product: February 24th, 2015
Variation: March 16th, 2018
29 days agobt2 brittle endosperm2: like bt1; endosperm ADPG pyrophosphorylase subunit; with sh2 complements E. coli glgC
4.05
   Tracy, WF et al. 2020. Plant Breed Rev 43:215-241     Reference: October 7th, 2019
Gene Product: November 4th, 2014
Variation: December 4th, 2018
29 days agodu1 dull endosperm1: glassy, tarnished endosperm; encodes a starch synthase III, that with an isoamylase-type debranching enzyme represses accumulation of phytoglycogen
10.03
GRMZM2G141399
Tracy, WF et al. 2020. Plant Breed Rev 43:215-241     Reference: October 7th, 2019
Gene Product: October 14th, 2016
Variation: June 29th, 2015
Gene Model: February 28th, 2012
29 days agomus1 MutS homolog1: cDNA similar to E. coli mutS
7.04
GRMZM2G056075
Dukowic-Schulze, S et al. 2014. BMC Plant Biology 14:118     Reference: October 7th, 2019
Gene Product: August 15th, 2005
Variation: January 28th, 2013
Gene Model: August 5th, 2015
29 days agosh1 shrunken1: inflated endosperm collapses on drying, forming smoothly indented kernels; sucrose synthase-sh1 of endosperm (compare sus1 and sus2); homotetramer; SSRs phi028, 044, 033
9.01
   Tracy, WF et al. 2020. Plant Breed Rev 43:215-241     Reference: October 7th, 2019
Gene Product: October 25th, 2006
Variation: September 25th, 2017
29 days agosh2 shrunken2: inflated, transparent, sweet kernels collapse on drying, becoming angular and brittle; endosperm ADPG pyrophosphorylase subunit (compare bt2); application: "supersweet" sweet corn - kernels sugar-sweet for long period
3.09
   Tracy, WF et al. 2020. Plant Breed Rev 43:215-241     Reference: October 7th, 2019
Gene Product: November 4th, 2014
Variation: January 9th, 2019
29 days agosu1 sugary1: endosperm wrinkled and translucent when dry; starch debranching enzyme I absent in developing endosperm, phytoglycogen but no debranching enzyme in germinating seeds; su1-am sugary-amylaceous; su1-st recessive starchy; application: the "sweet corn" gene - recessive kernels are creamy-sweet at milk stage
4.05
   Tracy, WF et al. 2020. Plant Breed Rev 43:215-241     Reference: October 7th, 2019
Gene Product: April 21st, 2016
Variation: June 6th, 2016
29 days agosu2 sugary2: endosperm glassy, translucent, sometimes wrinkled
6.04 - 6.05
   Tracy, WF et al. 2020. Plant Breed Rev 43:215-241     Reference: October 7th, 2019
Gene Product: October 14th, 2016
Variation: October 7th, 2010
29 days agowx1 waxy1: amylopectin (stained red by iodine) replaces amylose (blue staining) in endosperm and pollen; extensive allelic series; application: highly branched starch has gelling properties, used for food gels, adhesives, and other industrial purposes; SSRs phi022, 027, 061NCBI: granule-bound starch synthase 1, chloroplastic/amyloplastic
9.03
   Tracy, WF et al. 2020. Plant Breed Rev 43:215-241     Reference: October 7th, 2019
Gene Product: June 4th, 2008
Variation: March 8th, 2019
29 days agozpu1 pullulanase-type starch debranching enzyme1: single copy, cDNA clone similar to rice sequence; SSR umc1003The zpu1 gene encodes a pullulanase-type starch debranching enzyme. Analysis of plants homozygous for the zpu1-204 mutation reveal the genes role in starch catabolism. zpu1-204 endosperm accumulate maltooligosaccharides not found in wild type plants. zpu1-204 are also deficient for linear maltooligosaccharides.
2.05
GRMZM2G158043
Tracy, WF et al. 2020. Plant Breed Rev 43:215-241     Reference: October 7th, 2019
Gene Product: October 25th, 2011
Variation: June 29th, 2015
Gene Model: November 20th, 2014
29 days agozyp1 synaptonemal complex protein ZIPPER1: Homlogous to Yeast ZIPPER1 (ZIP1), Arabidopsis ZYP1 and rice ZEP1.
 
GRMZM2G143590
Dukowic-Schulze, S et al. 2014. BMC Plant Biology 14:118     Reference: October 7th, 2019
Gene Product: March 2nd, 2011
Variation: March 2nd, 2011
Gene Model: June 19th, 2014
29 days agosweet15a sugars will eventually be exported transporter15a:
4.05
GRMZM2G168365
Lopez-Coria, M et al. 2019. Genes doi: 10.3390/genes10100780     Reference: October 7th, 2019
Gene Product: November 4th, 2015
Variation: September 1st, 2003
Gene Model: November 3rd, 2015
29 days agozip5 zinc-regulated, iron-regulated transporter-like protein5:
6.04
GRMZM2G064382
Dukowic-Schulze, S et al. 2014. BMC Plant Biology 14:118     Reference: October 7th, 2019
Gene Product: June 5th, 2019
Variation: September 1st, 2003
Gene Model: August 25th, 2018
29 days agosbe1 starch branching enzyme1: maize kernel cDNA sequence is similar to starch branching enzyme I of bacteria, encodes a putative 64-amino acid plastid transit peptide (aka sbe1)
5.03
   Tracy, WF et al. 2020. Plant Breed Rev 43:215-241     Reference: October 7th, 2019
Gene Product: September 1st, 2003
Variation: January 5th, 2018
29 days agosbe3 starch branching enzyme3:
8.06
GRMZM2G005298
Tracy, WF et al. 2020. Plant Breed Rev 43:215-241     Reference: October 7th, 2019
Gene Product: June 6th, 2011
Variation: June 1st, 2011
Gene Model: September 23rd, 2018
29 days agosweet4c sugars will eventually be exported transporter4c: Mutants are defective in seed filling
5.04
GRMZM2G137954
Lopez-Coria, M et al. 2019. Genes doi: 10.3390/genes10100780   LOC_Os02g19820 (MSU/TIGR) Reference: October 7th, 2019
Gene Product: November 4th, 2015
Variation: November 3rd, 2015
Gene Model: November 3rd, 2015
29 days agosweet11a sugars will eventually be exported transporter11:
1.06
GRMZM2G368827
Lopez-Coria, M et al. 2019. Genes doi: 10.3390/genes10100780     Reference: October 7th, 2019
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
29 days agohp3 histidine-containing phosphotransfer protein3:
4.08
GRMZM2G451604
Dukowic-Schulze, S et al. 2014. BMC Plant Biology 14:118     Reference: October 7th, 2019
Variation: April 4th, 2015
Gene Model: April 4th, 2015
29 days agosu4 sugary4: duplicate factor: in combination with su3 gives sugary endosperm phenotype.
6.05
GRMZM2G090905
Tracy, WF et al. 2020. Plant Breed Rev 43:215-241     Reference: October 7th, 2019
Gene Product: October 25th, 2011
Variation: June 3rd, 2011
Gene Model: October 24th, 2011
29 days agosweet6b sugars will eventually be exported transporter6b:
 
GRMZM2G416965
Lopez-Coria, M et al. 2019. Genes doi: 10.3390/genes10100780     Reference: October 7th, 2019
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
29 days agosweet13b sugars will eventually be exported transporter13b:
 
GRMZM2G021706
Lopez-Coria, M et al. 2019. Genes doi: 10.3390/genes10100780     Reference: October 7th, 2019
Gene Product: November 4th, 2015
Variation: February 17th, 2018
Gene Model: November 3rd, 2015
29 days agosweet14b sugars will eventually be exported transporter14b:
 
GRMZM2G015976
Lopez-Coria, M et al. 2019. Genes doi: 10.3390/genes10100780     Reference: October 7th, 2019
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
29 days agodmc1 disrupted meiotic cDNA homolog1:
 
GRMZM2G109618
Dukowic-Schulze, S et al. 2014. BMC Plant Biology 14:118     Reference: October 7th, 2019
Variation: May 12th, 2017
Gene Model: January 27th, 2017
29 days agomre11a meiotic recombination protein 11 homolog A: transgenic expression has positive role in plant salt tolerance (Luo et al., 2019)
 
GRMZM2G106056
Dukowic-Schulze, S et al. 2014. BMC Plant Biology 14:118     Reference: October 7th, 2019
Variation: May 10th, 2017
Gene Model: January 27th, 2017
29 days agosweet13a sugars will eventually be exported transporter13a:
10.03
GRMZM2G173669
Lopez-Coria, M et al. 2019. Genes doi: 10.3390/genes10100780     Reference: October 7th, 2019
Gene Product: November 4th, 2015
Variation: February 17th, 2018
Gene Model: December 28th, 2017
29 days agostk1 serine threonine kinase1: mutants have reduced pollen transmission
9.02
   Javeed, A et al. 2019. Applied Ecology and Environmental Research 17:1789-11802     Reference: October 7th, 2019
Gene Product: May 13th, 2014
Variation: October 10th, 2018
29 days agobub3 budding inhibited by benzimidazoles homolog3: encodes WD40 repeat-like superfamily protein that is a mitotic checkpoint
9.02
GRMZM5G899300
Dukowic-Schulze, S et al. 2014. BMC Plant Biology 14:118     Reference: October 7th, 2019
Variation: January 16th, 2017
Gene Model: January 15th, 2017
31 days agozp27 27-kDa zein protein: proline rich; least abundant of zeins in endosperm, not clear if all in zp27 cluster
7.02
   Zhang, ZY et al. 2019. Plant Biotechnol J pp.doi: 10.1111/pbi.13273     Reference: October 5th, 2019
Gene Product: September 17th, 2010
Variation: September 16th, 2010
33 days agoxyl1 xylanase1: Encodes an endoxylanase synthesized by a tapetum mRNA; predominant protein on the surface of maize pollen
 
GRMZM2G170839
de O Buanafina, MM et al. 2019. Planta pp.doi: 10.1007/s00425-019-03288-y     Reference: October 3rd, 2019
Gene Product: September 1st, 2003
Variation: October 17th, 2018
Gene Model: October 15th, 2018
33 days agoasg75  : NCBI: similar to Arabidopsis lipase class 3 family protein
1.04
GRMZM5G882821
de O Buanafina, MM et al. 2019. Planta pp.doi: 10.1007/s00425-019-03288-y     Reference: October 3rd, 2019
Variation: September 19th, 2009
Gene Model: June 30th, 2017
34 days agorf2 restorer of fertility2: see rf1; cDNA prf2a complements E. coli mutant deficient in aldehyde dehydrogenase; mitochondrial
9.03
   Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Variation: December 18th, 2006
34 days agoaldh22 aldehyde dehydrogenase22: NCBI: similar to Arabidopsis aldehyde dehydrogenase 22A1
7.06
GRMZM2G135341
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Variation: April 11th, 2017
Gene Model: April 11th, 2017
34 days agogpn1 glyceraldehyde-3-phosphate deHaseN1: cDNA sequence
4.05
GRMZM2G035268
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Variation: June 8th, 2010
Gene Model: July 27th, 2016
34 days agoaldh5 aldehyde dehydrogenase5: cDNA similar to rf2 (prf2d-exprA7); complements E. coli
3.09
GRMZM2G097706
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: June 28th, 2005
Variation: June 20th, 2012
Gene Model: September 30th, 2015
34 days agomis1 putative aldehyde dehydrogenase MIS1:
 
GRMZM2G090087
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Variation: January 15th, 2011
Gene Model: January 22nd, 2016
34 days agoaldh7 aldehyde dehydrogenase7:
 
GRMZM2G365483
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
34 days agoaldh8 aldehyde dehydrogenase8:
 
GRMZM2G325115
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
34 days agoaldh14 aldehyde dehydrogenase14:
 
GRMZM2G060800
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
34 days agoaldh11 aldehyde dehydrogenase11:
 
GRMZM2G013214
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
34 days agoaldh15 aldehyde dehydrogenase15:
 
GRMZM2G119482
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
34 days agoaldh16 aldehyde dehydrogenase16:
 
GRMZM2G128114
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
34 days agoaldh18 aldehyde dehydrogenase18:
 
GRMZM2G122172
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
34 days agoaldh19 aldehyde dehydrogenase19:
 
GRMZM2G365440
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
34 days agoaldh23 aldehyde dehydrogenase23:
 
GRMZM2G407949
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
34 days agoaldh25 aldehyde dehydrogenase25:
 
GRMZM2G103546
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
34 days agoaldh26 aldehyde dehydrogenase26:
 
GRMZM2G135470
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
34 days agoaldh27 aldehyde dehydrogenase27:
 
GRMZM2G155502
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
34 days agoaldh28 aldehyde dehydrogenase28:
 
GRMZM2G354187
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
34 days agoaldh9 aldehyde dehydrogenase9:
 
GRMZM2G016189
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
34 days agoaldh10 aldehyde dehydrogenase10:
 
GRMZM5G811837
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
34 days agoaldh12 aldehyde dehydrogenase12:
 
GRMZM5G820733
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
34 days agoaldh13 aldehyde dehydrogenase13:
 
GRMZM2G118800
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
34 days agoaldh20 aldehyde dehydrogenase20:
 
GRMZM2G130440
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
34 days agoaldh24 aldehyde dehydrogenase24:
 
GRMZM2G398633
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
34 days agoaldh17 aldehyde dehydrogenase17:
5.05
GRMZM2G169458
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
34 days agoaldh21 aldehyde dehydrogenase21:
7.02
GRMZM2G001898
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
34 days agoaldh2 aldehyde dehydrogenase2: cDNA similar to rf2; transgene in E. coli shows aldehyde dehydrogenase activity, but unable to complement the ALDH deficient E. coli mutant; mitochondrial location inferred from presence of leader sequence
4.06
GRMZM2G125268
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: September 1st, 2003
Variation: May 13th, 2009
Gene Model: September 30th, 2015
34 days agoaldh3 aldehyde dehydrogenase3: cDNA sequence similar to rf2; complements E. coli JA111 with defective ALDH
3.09
GRMZM2G071021
Zhou, ML et al. 2012. Funct Integr Genomics 12:683-691     Reference: October 2nd, 2019
Gene Product: June 28th, 2005
Variation: May 20th, 2009
Gene Model: October 6th, 2015
36 days agoznf1 zinc finger protein1: glucose starved, root tip cDNA
9.03
GRMZM5G836222
Marques, TL et al. 2020. Acta Scientiarum Agronomy 42: e43479     Reference: September 30th, 2019
Gene Product: September 1st, 2003
Variation: January 14th, 2019
Gene Model: January 13th, 2019
36 days agofbl41 F-box protein41: mutants have greater resistance to Rhizoctonia solani; rice overexpressing ZmFBL41 showed elevated susceptibility to R. solani.
 
GRMZM2G109140
Li, N et al. 2019. Nature Genetics pp.doi: 10.1038/s41588-019-0503-y     Reference: September 30th, 2019
Gene Product: July 25th, 2017
Variation: September 30th, 2019
Gene Model: September 30th, 2019
38 days agoscro1 scarecrow1: mRNA expressed in endodermis and quiescent center of root, influencing radial pattern
4.08
GRMZM2G131516
Hughes, TE et al. 2019. Development pp.doi: 10.1242/dev.177543     Reference: September 28th, 2019
Gene Product: June 24th, 2019
Variation: June 24th, 2019
Gene Model: November 11th, 2012
Recommended by Ed Coe:
January 25th, 2007
38 days agogras37 GRAS-transcription factor 37: In double mutants with scro1, most leaf veins are separated by one rather than two mesophyll cells Hughes et al., 2019)
 
   Hughes, TE et al. 2019. Development pp.doi: 10.1242/dev.177543     Reference: September 28th, 2019
Gene Product: June 24th, 2019
Variation: June 24th, 2019
39 days agogt1 grassy tillers1: numerous basal branches; vegetatively totipotent in combination with id1 and factors for perennialismputative transcription factor that reduces branching, and is induced by shade
1.04
GRMZM2G005624
Dong, ZB, et al. 2019. Nature communications. 10:3810     Reference: September 27th, 2019
Gene Product: March 5th, 2012
Variation: August 18th, 2011
Gene Model: March 5th, 2012
39 days agotb1 teosinte branched1: many tillers; ear branches tassel-like; affects apical dominanceGRASSIUS: TCP transcription factor (TCP1)
1.09
   Dong, ZB, et al. 2019. Nature communications. 10:3810     Reference: September 27th, 2019
Gene Product: September 14th, 2016
Variation: February 2nd, 2017
39 days agowab1 Wavy auricles in blades1: dominant confers auricle tissue in blade portion of leafrecessive mutants showed extremely acute tassel branch angles accompanied by a significant reduction in the size of the pulvinus compared with normal plants
2.06 - 2.07
GRMZM2G110242
Pecher, P et al. 2019. PloS Pathogens 15: e1008035   LOC_Os09g24480 (MSU/TIGR)
Os09g0410500 (Gramene)
Reference: September 27th, 2019
Gene Product: September 14th, 2016
Variation: November 2nd, 2014
Gene Model: November 2nd, 2014
39 days agotcptf10 TCP-transcription factor 10: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
39 days agotcptf11 TCP-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
39 days agotcptf12 TCP-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
39 days agotcptf13 TCP-transcription factor 13: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
39 days agotcptf14 TCP-transcription factor 14: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
39 days agotcptf15 TCP-transcription factor 15: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
39 days agotcptf16 TCP-transcription factor 16: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
39 days agotcptf18 TCP-transcription factor 18: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
39 days agotcptf19 TCP-transcription factor 19: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
39 days agotcptf20 TCP-transcription factor 20: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
39 days agotcptf21 TCP-transcription factor 21: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
39 days agotcptf22 TCP-transcription factor 22: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
39 days agotcptf23 TCP-transcription factor 23: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
39 days agotcptf24 TCP-transcription factor 24: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
39 days agotcptf25 TCP-transcription factor 25: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
39 days agotcptf26 TCP-transcription factor 26: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
39 days agotcptf27 TCP-transcription factor 27: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
39 days agotcptf28 TCP-transcription factor 28: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
39 days agotcptf30 TCP-transcription factor 30: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
39 days agotcptf31 TCP-transcription factor 31: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
39 days agotcptf32 TCP-transcription factor 32: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
39 days agotcptf34 TCP-transcription factor 34: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
39 days agotcptf35 TCP-transcription factor 35: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
39 days agotcptf36 TCP-transcription factor 36: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
39 days agotcptf37 TCP-transcription factor 37: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
39 days agotcptf38 TCP-transcription factor 38: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
39 days agotcptf4 TCP-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
39 days agotcptf40 TCP-transcription factor 40: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
39 days agotcptf41 TCP-transcription factor 41: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
39 days agotcptf42 TCP-transcription factor 42: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
39 days agotcptf44 TCP-transcription factor 44: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
39 days agotcptf5 TCP-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
39 days agotcptf6 TCP-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
39 days agotcptf7 TCP-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
39 days agotcptf8 TCP-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
39 days agotcptf9 TCP-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
39 days agobhlh82 bHLH-transcription factor 82: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, HL, et al. 2019. PLoS Genetics. 15:e1008377     Reference: September 27th, 2019
Gene Product: September 14th, 2016
Variation: August 30th, 2019
39 days agotcptf29 TCP-transcription factor 29: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.09
GRMZM2G148022
Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
Gene Model: September 24th, 2018
39 days agotga1 teosinte glume architecture1: glumes indurated, erect, long, boat-shaped; factor transferred from teosinte
4.05
GRMZM2G101511
Dong, ZB, et al. 2019. Nature communications. 10:3810     Reference: September 27th, 2019
Gene Product: July 5th, 2019
Variation: May 7th, 2015
Gene Model: October 28th, 2011
39 days agotcptf33 TCP-transcription factor 33: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to Arabidopsis transcription factor TCP4
3.01
AC205574.3_FG006
Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
Gene Model: November 22nd, 2017
39 days agotcptf43 TCP-transcription factor 43: Mapped upper band to this site.Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.simiiar to Arabidosis transcription factor TCP2
2.10
GRMZM2G020805
Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
Variation: February 28th, 2017
Gene Model: February 28th, 2017
39 days agotcptf2 TCP-transcription factor 2: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.09
GRMZM2G003944
Pecher, P et al. 2019. PloS Pathogens 15: e1008035     Reference: September 27th, 2019
Gene Product: September 27th, 2019
Variation: March 17th, 2017
Gene Model: March 17th, 2017
39 days agopan2 pangloss2: Defines polarization in divisions of subsidiary mother cells at guard cells
 
GRMZM2G034572
Wang, HL, et al. 2019. PLoS Genetics. 15:e1008377     Reference: September 27th, 2019
Gene Product: November 27th, 2012
Variation: November 27th, 2012
Gene Model: November 27th, 2012
40 days agovpsh26 vacuolar protein sorting homolog26: endosperm cDNA 5C06F05 similar to conserved vertebrate embryogenesis protein
10.03
GRMZM2G136563
Chen, L et al. 2019. Plant Biotechnol J pp.doi: 10.1111/pbi.13267     Reference: September 26th, 2019
Gene Product: September 1st, 2003
Variation: October 15th, 2015
Gene Model: September 26th, 2019
40 days agovps29 vacuolar protein sorting29: Involved in kernel morphology variance
 
GRMZM2G068489
Chen, L et al. 2019. Plant Biotechnol J pp.doi: 10.1111/pbi.13267     Reference: September 26th, 2019
Variation: September 26th, 2019
Gene Model: September 26th, 2019
41 days agolls1 lethal leaf spot1: chlorotic-necrotic lesions resembling Helminthosporium carbonum infection
1.01
   Johal et al. 1994. Maydica 39:69-76     Reference: September 25th, 2019
Gene Product: November 5th, 2014
Variation: September 12th, 2018
41 days agoles22 lesion22: (was Les*-J2552, les29) dominant leaf lesions,early-medium timing, small size, white color; porphyria
1.04
GRMZM2G044074
Johal et al. 1994. Maydica 39:69-76     Reference: September 25th, 2019
Gene Product: September 1st, 2003
Variation: April 1st, 2015
Gene Model: August 16th, 2017
41 days agondl1 needle1: displays severe reproductive defects and strong genetic interactions with known mutants affected in the regulation of the plant hormone auxin
 
GRMZM2G038401
Liu, QJ et al. 2019. Proc Natl Acad Sci, USA 116:19736-19742     Reference: September 25th, 2019
Gene Product: September 10th, 2019
Variation: September 10th, 2019
Gene Model: September 10th, 2019
42 days agoles1 lesion1: dominant Les1 plants have large necrotic lesions resembling disease lesions formed by fungal infections on susceptible lines
2.03 - 2.04
   Neuffer, MG et al. 1983. pp.123-134 in Reddy, GM and Coe, E. 1983. Oxford and IBH Pub, New Delhi     Reference: September 24th, 2019
Variation: September 1st, 2003
42 days agoles10 lesion10: like Les1; numerous small, round, necrotic lesions
2.04 - 2.06
   Neuffer, MG et al. 1983. pp.123-134 in Reddy, GM and Coe, E. 1983. Oxford and IBH Pub, New Delhi     Reference: September 24th, 2019
Variation: November 29th, 2004
42 days agoles2 lesion2: dominant Les2 plants have small white lesions resembling disease lesions formed by fungal infections on resistant lines
1.02 - 1.02
   Neuffer, MG et al. 1983. pp.123-134 in Reddy, GM and Coe, E. 1983. Oxford and IBH Pub, New Delhi     Reference: September 24th, 2019
Variation: September 1st, 2003
42 days agoles4 lesion4: dominant Les4 plants have late expression of large necrotic lesions on leaf blade and sheath
2.08 - 2.09
   Neuffer, MG et al. 1983. pp.123-134 in Reddy, GM and Coe, E. 1983. Oxford and IBH Pub, New Delhi     Reference: September 24th, 2019
Variation: September 1st, 2003
42 days agoles5 lesion5: like les2
1.05 - 1.06
   Neuffer, MG et al. 1983. pp.123-134 in Reddy, GM and Coe, E. 1983. Oxford and IBH Pub, New Delhi     Reference: September 24th, 2019
Variation: May 10th, 2015
42 days agoles6 lesion6: like les4, but with many small to medium, irregular, mottled spots
10.00 - 10.03
   Neuffer, MG et al. 1983. pp.123-134 in Reddy, GM and Coe, E. 1983. Oxford and IBH Pub, New Delhi     Reference: September 24th, 2019
Variation: September 1st, 2003
42 days agoles7 lesion7: dominant Les7 plants have late expression of small chlorotic lesions
 
   Neuffer, MG et al. 1983. pp.123-134 in Reddy, GM and Coe, E. 1983. Oxford and IBH Pub, New Delhi     Reference: September 24th, 2019
Variation: September 1st, 2003
42 days agoles11 lesion11: dominant Les11 plants have large lesions, variable with conditions and background; can be expressed in leaf 1 & 2
2.01 - 2.02
   Neuffer, MG et al. 1983. pp.123-134 in Reddy, GM and Coe, E. 1983. Oxford and IBH Pub, New Delhi     Reference: September 24th, 2019
Variation: September 1st, 2003
42 days agoles*-N1378 lesion candidate 1378: Time late (41-day, 11-leaf); small to large elliptical brown necrotic lesions on leaf blade, sheath; frequency 8-10 in clusters with satellites.
 
   Neuffer, MG et al. 1983. pp.123-134 in Reddy, GM and Coe, E. 1983. Oxford and IBH Pub, New Delhi     Reference: September 24th, 2019
Variation: September 1st, 2003
42 days agoles21 lesion21: Dominant Les21 plants have medium-sized early lesions
 
   Neuffer, MG et al. 1983. pp.123-134 in Reddy, GM and Coe, E. 1983. Oxford and IBH Pub, New Delhi     Reference: September 24th, 2019
Variation: September 1st, 2003
46 days agoabi12 ABI3-VP1-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Tian, JG, et al. 2019. Science. 365:658-664     Reference: August 22nd, 2019
Variation: September 20th, 2019
47 days agoglb1 globulin1: was prot1; electrophoretic mobility, null allele is known; embryo protein; SSRs phi011, 055, 094
1.09
   Zheng, XX et al. 2019. Plant Cell pp.doi: 10.1105/tpc.19.00444     Reference: September 19th, 2019
Gene Product: September 1st, 2003
Variation: January 29th, 2015
47 days agoglb2 globulin2: presence-absence
1.11
   Zheng, XX et al. 2019. Plant Cell pp.doi: 10.1105/tpc.19.00444     Reference: September 19th, 2019
Gene Product: September 1st, 2003
Variation: March 30th, 2009
47 days agolg1 liguleless1: In the liguleless1 mutant, ligule and auricle are missing; leaves are upright
2.01
   Ren, ZZ et al. 2019. Plant Biotechnol J pp.doi: 10.1111/pbi.13255     Reference: September 19th, 2019
Gene Product: December 18th, 2014
Variation: November 8th, 2007
47 days agovp1 viviparous1: embryo fails to become dormant, viable if transplanted; some alleles dormant; chlorophyll and carotenoids unaffected; anthocyanins in aleurone suppressed (aka vp4); cDNA
3.05
   Zheng, XX et al. 2019. Plant Cell pp.doi: 10.1105/tpc.19.00444     Reference: September 19th, 2019
Gene Product: July 29th, 2015
Variation: August 22nd, 2013
47 days agoesp5 embryo specific protein5: (was Emb5); cDNA clone, embryo specific, ABA responsive, deduced amino acid sequence very hydrophilic and gly/glu-rich (aka emb5)
6.05
GRMZM2G162659
Zheng, XX et al. 2019. Plant Cell pp.doi: 10.1105/tpc.19.00444     Reference: September 19th, 2019
Variation: September 1st, 2003
Gene Model: July 27th, 2016
47 days agopyl3 pyrabactin resistance-like protein3: plays role in plant drought resistance (He et al., 2018)
 
GRMZM2G154987
Zheng, XX et al. 2019. Plant Cell pp.doi: 10.1105/tpc.19.00444     Reference: September 19th, 2019
Gene Product: April 21st, 2018
Gene Model: April 21st, 2018
47 days agoili1 increased leaf inclination1: knockout mutants confer decreased leaf angle
 
GRMZM2G072820
Ren, ZZ et al. 2019. Plant Biotechnol J pp.doi: 10.1111/pbi.13255   LOC_Os04g54900 (MSU/TIGR)
Os04g0641700 (Gramene)
Reference: September 19th, 2019
Gene Product: September 14th, 2016
Variation: September 19th, 2019
Gene Model: September 19th, 2019
47 days agostk5 serine/threonine-protein kinase5:
 
GRMZM2G334791
Zheng, XX et al. 2019. Plant Cell pp.doi: 10.1105/tpc.19.00444     Reference: September 19th, 2019
Gene Product: May 13th, 2014
Gene Model: September 19th, 2019
47 days agosnrkII11 SnRK2 serine threonine protein kinase 11:
6.05
GRMZM2G063961
Zheng, XX et al. 2019. Plant Cell pp.doi: 10.1105/tpc.19.00444     Reference: September 19th, 2019
Gene Product: April 14th, 2018
Gene Model: February 11th, 2015
47 days agosnrkII2 SnRK2 serine threonine protein kinase2: induced by cold, salt and ABA
7.04
GRMZM2G056732
Zheng, XX et al. 2019. Plant Cell pp.doi: 10.1105/tpc.19.00444     Reference: September 19th, 2019
Gene Product: April 14th, 2018
Gene Model: February 11th, 2015
47 days agosnrkII5 SnRK2 serine threonine kinase5:
10.07
GRMZM2G110908
Zheng, XX et al. 2019. Plant Cell pp.doi: 10.1105/tpc.19.00444     Reference: September 19th, 2019
Gene Product: April 14th, 2018
Gene Model: February 11th, 2015
48 days agodek1 defective kernel1: germless; colorless (mosaic) aleurone; floury white endosperm; anthocyanins and carotenoids absent; cultured embryos not obtained (aka clf1, gay1)
1.03
   Sheridan, WF; Neuffer, MG pp.105-122 in Reddy, GM and Coe, EH (eds). 1983. Gene Structure and Function in Higher Plants     Reference: September 18th, 2019
Gene Product: September 1st, 2003
Variation: September 8th, 2018
48 days agodek12 defective kernel12: collapsed endosperm; lethal; cultured embryos green, narrow-leaved, curled
9.00 - 9.03
   Sheridan, WF; Neuffer, MG pp.105-122 in Reddy, GM and Coe, EH (eds). 1983. Gene Structure and Function in Higher Plants     Reference: September 18th, 2019
Variation: September 1st, 2003
48 days agohsf1 hairy sheath frayed1: dominant Hsf1 plants have pubescent sheaths and leaf margins; liguled enations at leaf marginscytokinin receptor; cytokinin responsive histidine protein kinase
5.06 - 5.07
GRMZM2G151223
Bird, RMcK and Neuffer, MG 1985. pp.818-822 in Freeling, M (ed). 1985.Alan R Liss, Inc, New York     Reference: September 18th, 2019
Gene Product: May 20th, 2016
Variation: August 23rd, 2019
Gene Model: August 23rd, 2019
48 days agoles3 lesion3: like les1; large, elliptical, necrotic lesions
10.02 - 10.03
   Walbot, V et al. 1983. pp.431-442 in Kosuge, T et al. 1983.Plenum Press, NY     Reference: September 18th, 2019
Variation: May 20th, 2006
48 days agoles8 lesion8: dominant Les8 plants have late expression of small, pale green lesions
9.02
   Bird, RMcK and Neuffer, MG 1985. pp.818-822 in Freeling, M (ed). 1985.Alan R Liss, Inc, New York     Reference: September 18th, 2019
Variation: September 1st, 2003
48 days agolxm1 lax midrib1: dominant Lxm1 plants have leaves with wide, flat, flexible midrib. Leaf-like structures (flaps) can form on the surface of the leaf above veins.
3.06
   Bird, RMcK and Neuffer, MG 1985. pp.818-822 in Freeling, M (ed). 1985.Alan R Liss, Inc, New York     Reference: September 18th, 2019
Variation: September 1st, 2003
48 days agopro1 proline responding1: (allele o6) crumpled opaque kernel; green-striped lethal seedling; responds to proline in culture
8.04
GRMZM2G375504
Sheridan, WF; Neuffer, MG pp.105-122 in Reddy, GM and Coe, EH (eds). 1983. Gene Structure and Function in Higher Plants     Reference: September 18th, 2019
Gene Product: March 19th, 2015
Variation: September 18th, 2018
Gene Model: June 22nd, 2014
48 days agoles12 lesion12: dominant Les12 plants have many small to medium, chlorotic to necrotic lesions on the leaf blade beginning at 5 leaf stage
10.00 - 10.03
   Walbot, V et al. 1983. pp.431-442 in Kosuge, T et al. 1983.Plenum Press, NY     Reference: September 18th, 2019
Variation: October 21st, 2003
48 days agorld1 rolled leaf1: in dominant Rld1 plants, leaves are tightly rolled and tend to be entangled; ligular flaps on abaxial surface of leaf; resembles Ce1
9.07 - 9.08
   Bird, RMcK and Neuffer, MG 1985. pp.818-822 in Freeling, M (ed). 1985.Alan R Liss, Inc, New York     Reference: September 18th, 2019
Gene Product: October 6th, 2015
Variation: June 30th, 2012
48 days agodnj*-N1534 defective navajoN1534: crumpled floury defective kernel with tendency for normal tissue around the silk attachment. Embryos germinate in tissue culture and grow best on enriched media; nonviable seedling
5.05 - 5.09
   Sheridan, WF; Neuffer, MG pp.105-122 in Reddy, GM and Coe, EH (eds). 1983. Gene Structure and Function in Higher Plants     Reference: September 18th, 2019
Variation: September 1st, 2003
48 days agomn5 miniature5: small kernel with loose pericarp, tiny green seedling
5.04
   Sheridan, WF; Neuffer, MG pp.105-122 in Reddy, GM and Coe, EH (eds). 1983. Gene Structure and Function in Higher Plants     Reference: September 18th, 2019
Variation: February 9th, 2006
48 days agorgh*-N1524 roughN1524: floury etched kernel; grainy virescent seedling
10.00 - 10.02
   Sheridan, WF; Neuffer, MG pp.105-122 in Reddy, GM and Coe, EH (eds). 1983. Gene Structure and Function in Higher Plants     Reference: September 18th, 2019
Variation: September 1st, 2003
48 days agosmk*-N1529 small kernelN1529: small kernel; yellow green necrotic seedling
5.00 - 5.04
   Sheridan, WF; Neuffer, MG pp.105-122 in Reddy, GM and Coe, EH (eds). 1983. Gene Structure and Function in Higher Plants     Reference: September 18th, 2019
Variation: September 1st, 2003
49 days agosn1 scutellar node color1: anthocyanin in coleoptile, nodes, auricle, leaf blade, etc. (compare Lc1 and Hopi1)
10.06
   Gavazzi, G et al. pp.91-103 in Reddy, GM and Coe, EH (eds). 1986. Gene Structure and Function in Higher Plants     Reference: September 17th, 2019
Gene Product: September 1st, 2003
Variation: December 24th, 2009
49 days agodxs2 deoxy xylulose synthase 2: root specific; function inferred from sequence and expression pattern comparison with Medicago trunculata genes
9.03
GRMZM2G493395
Fang, H et al. 2019. Plant J pp.doi: 10.1111/tpj.14539     Reference: September 17th, 2019
Gene Product: August 17th, 2004
Variation: September 17th, 2019
Gene Model: December 9th, 2011
50 days agobnlg565  : similar to Arabidopsis folate transporter 1
5.01
GRMZM5G840435
Suzuki, M et al. 2019. Plant J pp.doi: 10.1111/tpj.14535     Reference: September 16th, 2019
Variation: September 1st, 2003
Gene Model: June 15th, 2018
50 days agocsu582  : similar to Arabidopsis Pyridoxal biosynthesis protein PDX1.3
7.00
GRMZM2G120652
Suzuki, M et al. 2019. Plant J pp.doi: 10.1111/tpj.14535     Reference: September 16th, 2019
Variation: September 1st, 2003
Gene Model: September 4th, 2018
50 days agobm4 brown midrib4: mutant looks like bm1; encodes folylpolyglutamate synthetase
9.08
GRMZM2G393334
Suzuki, M et al. 2019. Plant J pp.doi: 10.1111/tpj.14535     Reference: September 16th, 2019
Gene Product: December 17th, 2014
Variation: December 17th, 2014
Gene Model: December 17th, 2014
50 days agolyce1 lycopene epsilon cyclase1: determines qualitative composition of endosperm carotenoids
8.05
GRMZM2G012966
Luo, H et al. 2019. Food Chemistry pp.doi: 10.1016/j.foodchem.2019.125525     Reference: September 16th, 2019
Gene Product: December 10th, 2011
Variation: October 3rd, 2011
Gene Model: October 3rd, 2011
50 days agops1 pink scutellum1: (aka vp7, lyc1, lycB) some alleles viviparous; endosperm and scutellum pink, seedling white with pink flush
5.04 - 5.04
   Luo, H et al. 2019. Food Chemistry pp.doi: 10.1016/j.foodchem.2019.125525     Reference: September 16th, 2019
Gene Product: December 10th, 2011
Variation: March 30th, 2011
50 days agovp5 viviparous5: like vp2cDNA, strongest hybridization to this site; other sites are near o2, bnl17.25 and dup103; encodes a 2-step phytoene desaturase; SSR umc1070
1.02 - 1.02
   Luo, H et al. 2019. Food Chemistry pp.doi: 10.1016/j.foodchem.2019.125525     Reference: September 16th, 2019
Gene Product: December 13th, 2011
Variation: March 4th, 2014
50 days agovp9 viviparous9: (was y7, z1, zds1) like vp2; vp9-4889 dormant, pale aleurone, pale green seedling
7.02
GRMZM2G454952
Luo, H et al. 2019. Food Chemistry pp.doi: 10.1016/j.foodchem.2019.125525     Reference: September 16th, 2019
Gene Product: December 13th, 2011
Variation: March 25th, 2017
Gene Model: March 24th, 2017
50 days agoy1 yellow endosperm1: reduced carotenoid pigments in endosperm; some alleles affect chlorophyll in seedlings (e.g. y1-8549, y1-pb)
6.01
GRMZM2G300348
Luo, H et al. 2019. Food Chemistry pp.doi: 10.1016/j.foodchem.2019.125525     Reference: September 16th, 2019
Gene Product: December 14th, 2011
Variation: August 26th, 2014
Gene Model: September 22nd, 2011
50 days agogpc4 glyceraldehyde-3-phosphate dehydrogenase4: C subunit, electrophoretic mobility, coding sequence homology to gpc3, unique 3' untranslated region
5.05
GRMZM2G176307
Sandhu, D et al. 2019. Funct Integr Genomics pp.doi: 10.1007/s10142-019-00707     Reference: September 16th, 2019
Gene Product: September 1st, 2003
Variation: December 13th, 2012
Gene Model: August 12th, 2014
50 days agolox10 lipoxygenase10: green leaf volatiles, circadian, herbivore defense; sequence predicts plastidic location; images show location in non-chlorophyll containing organelles
4.09
GRMZM2G015419
Sandhu, D et al. 2019. Funct Integr Genomics pp.doi: 10.1007/s10142-019-00707     Reference: September 16th, 2019
Gene Product: January 3rd, 2018
Variation: June 6th, 2014
Gene Model: October 29th, 2015
50 days agodek33 defective kernel33: opaque, floury, dented, wrinkled kernel with floury endosperm; occasionally viviparous
5.04 - 5.05
GRMZM2G090068
Suzuki, M et al. 2019. Plant J pp.doi: 10.1111/tpj.14535     Reference: September 16th, 2019
Gene Product: November 13th, 2018
Variation: November 13th, 2018
Gene Model: November 13th, 2018
50 days agorrb2 related to retinoblastoma2: alternatively spliced cDNAs, ubiquitous, see rrb1
4.08
   Sandhu, D et al. 2019. Funct Integr Genomics pp.doi: 10.1007/s10142-019-00707     Reference: September 16th, 2019
Gene Product: September 1st, 2003
Variation: April 17th, 2015
50 days agocyp25 cytochrome P-450 25:
4.09
GRMZM2G070508
Sandhu, D et al. 2019. Funct Integr Genomics pp.doi: 10.1007/s10142-019-00707     Reference: September 16th, 2019
Gene Product: March 25th, 2019
Gene Model: June 8th, 2018
50 days agolox1 lipoxygenase1: Full length cDNA is expressed in E. coli (Kim et al. 2003)
3.06
   Luo, H et al. 2019. Food Chemistry pp.doi: 10.1016/j.foodchem.2019.125525     Reference: September 16th, 2019
Gene Product: November 13th, 2014
Variation: July 24th, 2008
50 days agosmk2 small kernel2: mutants are recessive embryo-lethal small kernel
4.10
GRMZM2G023528
Suzuki, M et al. 2019. Plant J pp.doi: 10.1111/tpj.14535     Reference: September 16th, 2019
Gene Product: April 14th, 2017
Variation: April 14th, 2017
Gene Model: April 14th, 2017
50 days agoc3h32 C3H-transcription factor32: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.04
AC233871.1_FG008
Sandhu, D et al. 2019. Funct Integr Genomics pp.doi: 10.1007/s10142-019-00707     Reference: September 16th, 2019
Variation: July 29th, 2004
Gene Model: June 21st, 2019
50 days agomybr88 MYB-related-transcription factor 88: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.09
GRMZM2G064328
Sandhu, D et al. 2019. Funct Integr Genomics pp.doi: 10.1007/s10142-019-00707     Reference: September 16th, 2019
Variation: September 1st, 2003
Gene Model: December 6th, 2016
50 days agohyd4 hydroxylase4: beta-carotene hydroxylase
 
GRMZM2G164318
Luo, H et al. 2019. Food Chemistry pp.doi: 10.1016/j.foodchem.2019.125525     Reference: September 16th, 2019
Gene Product: December 13th, 2011
Variation: September 3rd, 2011
Gene Model: April 9th, 2013
50 days agocyp14 cytochrome P450 14: encodes CYP97C
 
GRMZM2G143202
Luo, H et al. 2019. Food Chemistry pp.doi: 10.1016/j.foodchem.2019.125525     Reference: September 16th, 2019
Gene Product: June 3rd, 2015
Variation: June 3rd, 2015
Gene Model: April 8th, 2013
50 days agoko2 kaurene oxidase2:
 
GRMZM2G161472
Ding, YZ et al. 2019. Nature Plants pp.doi: 10.1038/s41477-019-0509-6     Reference: September 16th, 2019
Gene Product: October 27th, 2014
Gene Model: October 27th, 2014
50 days agofgp2 folylpolyglutamate synthetase2: Paralog of bm4 also encoding FPGS
 
GRMZM5G869779
Suzuki, M et al. 2019. Plant J pp.doi: 10.1111/tpj.14535     Reference: September 16th, 2019
Gene Product: December 17th, 2014
Variation: December 17th, 2014
Gene Model: December 17th, 2014
50 days agoacco15 1-aminocyclopropane-1-carboxylate oxidase15:
 
GRMZM2G166639
Sandhu, D et al. 2019. Funct Integr Genomics pp.doi: 10.1007/s10142-019-00707     Reference: September 16th, 2019
Gene Product: May 16th, 2016
Gene Model: May 16th, 2016
50 days agoslac4 slow anion channel-associated4:
 
GRMZM2G169951
Sandhu, D et al. 2019. Funct Integr Genomics pp.doi: 10.1007/s10142-019-00707     Reference: September 16th, 2019
Gene Product: February 1st, 2018
Gene Model: February 1st, 2018
50 days agoirt1 iron-regulated transporter1:
 
GRMZM2G118821
Sandhu, D et al. 2019. Funct Integr Genomics pp.doi: 10.1007/s10142-019-00707     Reference: September 16th, 2019
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
50 days agodek140 defective kernel140: mutant abolished the C-to-U editing of cox3-314, nad2-26 and nad5-1916 leads to accumulated reactive oxygen species and promoted programmed cell death in endosperm cells due to the dysfunction of mitochondrial complex I and IV
 
GRMZM2G304965
Sandhu, D et al. 2019. Funct Integr Genomics pp.doi: 10.1007/s10142-019-00707     Reference: September 16th, 2019
Gene Product: December 27th, 2016
Variation: September 7th, 2019
Gene Model: September 7th, 2019
50 days agokr1 kauralexin reductase1:
 
GRMZM2G394968
Ding, YZ et al. 2019. Nature Plants pp.doi: 10.1038/s41477-019-0509-6     Reference: September 16th, 2019
Gene Product: September 16th, 2019
Gene Model: September 16th, 2019
50 days agokr2 kauralexin reductase2:
 
GRMZM2G073929
Ding, YZ et al. 2019. Nature Plants pp.doi: 10.1038/s41477-019-0509-6     Reference: September 16th, 2019
Gene Product: September 16th, 2019
Gene Model: September 16th, 2019
50 days agoGRMZM2G095400  :
 
GRMZM2G095400
Suzuki, M et al. 2019. Plant J pp.doi: 10.1111/tpj.14535     Reference: September 16th, 2019
Gene Product: September 16th, 2019
Gene Model: September 16th, 2019
50 days agobio1 biotin1: knockout mutant has defective embryo
 
GRMZM2G102156
Suzuki, M et al. 2019. Plant J pp.doi: 10.1111/tpj.14535     Reference: September 16th, 2019
Gene Product: September 16th, 2019
Variation: September 16th, 2019
Gene Model: September 16th, 2019
50 days agoqpt1 quinolinate phosphoribosyltransferase1: mutant has defective kernel
 
GRMZM5G887647
Suzuki, M et al. 2019. Plant J pp.doi: 10.1111/tpj.14535     Reference: September 16th, 2019
Gene Product: September 16th, 2019
Variation: September 16th, 2019
Gene Model: September 16th, 2019
50 days agoIDP602  : similar to Electron transporter, putative (DUF179) of A. thaliana
8.04
GRMZM2G084274
Sandhu, D et al. 2019. Funct Integr Genomics pp.doi: 10.1007/s10142-019-00707     Reference: September 16th, 2019
Variation: March 30th, 2007
Gene Model: August 30th, 2019
50 days agopck2 phosphoenolpyruvate carboxykinase homolog2: syntenic with pck1; leaf cDNA csu145, low copy, similar to yeast phosphoenolpyruvate carboxykinase
9.06
GRMZM5G870932
Sandhu, D et al. 2019. Funct Integr Genomics pp.doi: 10.1007/s10142-019-00707     Reference: September 16th, 2019
Gene Product: August 7th, 2014
Variation: September 26th, 2014
Gene Model: August 8th, 2014
58 days agoumc1788a  :
7.00
GRMZM2G090824
    Variation: September 1st, 2003
Gene Model: September 8th, 2019
59 days agobk4 brittle stalk4: mutants have a brittle stalk phenotype
7.03
   Jiao, SP et al. 2019. Plant Physiol pp.doi: doi.org/10.1104/pp.19.00615     Reference: September 7th, 2019
Gene Product: September 1st, 2003
Variation: September 7th, 2019
59 days agorf5 restorer of fertility5: dominant Rf5 restores fertility to cms-C; complementary with Rf4 and Rf6
 
   Hu, YM et al. 2006. Theor Appl Genet 113:357-360     Reference: September 7th, 2019
Variation: September 1st, 2003
59 days agorfi1 restorer of Cms-C fertility inhibitor1: inhibitor of the Rf5 restorer
 
   Hu, YM et al. 2006. Theor Appl Genet 113:357-360     Reference: September 7th, 2019
Variation: September 6th, 2019
59 days agodin1 drought-induced protein 19 homolog1: responds to salt stress and may impact the expression of stress-related genes
 
GRMZM2G014066
Zhang, XG et al. 2019. Plant Cell Rep pp.doi: 10.1007/s00299-019-02467-1     Reference: September 7th, 2019
Gene Product: May 15th, 2019
Gene Model: September 7th, 2019
60 days agoms23 male sterile23: pollen mother cells degeneratedominant Rf4 restores fertility to cms-C; complementary with Rf5 and Rf6
8.01 - 8.02
GRMZM2G021276
Jaqueth, JS et al. 2019. Plant J pp.doi: 10.1111/tpj.14521     Reference: September 6th, 2019
Gene Product: September 14th, 2016
Variation: September 6th, 2019
Gene Model: December 4th, 2016
60 days agopal1 phenylalanine ammonia lyase homolog1: leaf cDNA csu156 similar to rice phenylalanine ammonia lyase, single copy
5.05
   Yuan, W et al. 2019. Mol Plant Pathol pp.doi: 10.1111/mpp.12817     Reference: September 6th, 2019
Gene Product: September 6th, 2019
Variation: September 24th, 2014
60 days agopal2 phenylalanine ammonia lyase2:
2.04 - 2.04
GRMZM2G441347
Yuan, W et al. 2019. Mol Plant Pathol pp.doi: 10.1111/mpp.12817     Reference: September 6th, 2019
Gene Product: September 1st, 2003
Variation: February 21st, 2017
Gene Model: February 21st, 2017
60 days agopal3 phenylalanine ammonia lyase3: used primers on cDNA from glume bars to PCR out RFLP probe. 190 bp ss-mRNA with homology to phenylalanine ammonia lyase. Mapped minor band to this site.
4.05
GRMZM2G160541
Yuan, W et al. 2019. Mol Plant Pathol pp.doi: 10.1111/mpp.12817     Reference: September 6th, 2019
Gene Product: September 1st, 2003
Variation: September 25th, 2014
Gene Model: September 19th, 2014
60 days agopal7 phenylalanine ammonia lyase7:
 
GRMZM2G170692
Yuan, W et al. 2019. Mol Plant Pathol pp.doi: 10.1111/mpp.12817     Reference: September 6th, 2019
Gene Product: September 6th, 2019
Gene Model: May 6th, 2016
60 days agopal9 phenylalanine ammonia lyase9:
 
GRMZM2G029048
Yuan, W et al. 2019. Mol Plant Pathol pp.doi: 10.1111/mpp.12817     Reference: September 6th, 2019
Gene Product: September 6th, 2019
Gene Model: May 6th, 2016
60 days agopal6 phenylalanine ammonia lyase6:
 
GRMZM2G118345
Yuan, W et al. 2019. Mol Plant Pathol pp.doi: 10.1111/mpp.12817     Reference: September 6th, 2019
Gene Product: September 6th, 2019
Gene Model: May 6th, 2016
60 days agopal5 phenylalanine ammonia lyase5:
 
GRMZM2G081582
Yuan, W et al. 2019. Mol Plant Pathol pp.doi: 10.1111/mpp.12817     Reference: September 6th, 2019
Gene Product: September 6th, 2019
Gene Model: May 6th, 2016
60 days agopal4 phenylalanine ammonia lyase4:
 
GRMZM2G063917
Yuan, W et al. 2019. Mol Plant Pathol pp.doi: 10.1111/mpp.12817     Reference: September 6th, 2019
Gene Product: September 6th, 2019
Gene Model: May 6th, 2016
60 days agopal8 phenylalanine ammonia lyase8:
 
GRMZM2G334660
Yuan, W et al. 2019. Mol Plant Pathol pp.doi: 10.1111/mpp.12817     Reference: September 6th, 2019
Gene Product: September 6th, 2019
Gene Model: May 17th, 2016
60 days agopal10 phenylalanine ammonia lyase homolog10:
 
GRMZM2G326335
Yuan, W et al. 2019. Mol Plant Pathol pp.doi: 10.1111/mpp.12817     Reference: September 6th, 2019
Gene Product: September 6th, 2019
Gene Model: September 6th, 2019
60 days agorfi2 restorer of Cms-S fertility inhibitor2: inhibitor of the Rf9 restorer
 
   Gabay-Laughnan, S et al. 2009. Genetics 182:91-103     Reference: December 21st, 2009
Variation: September 6th, 2019
61 days agospi1 sparse inflorescence1: mutant tassels have fewer branches and spikelets, and its ears are small, with fewer kernels
3.08
GRMZM2G025222
Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: June 18th, 2018
Variation: September 5th, 2019
Gene Model: April 24th, 2013
Recommended by Lisa Harper:
October 7th, 2008
61 days agotd1 thick tassel dwarf1: shortened plants, fasciated ears, increased spikelet density in tassel
5.03
GRMZM2G300133
Liu, C et al. 2019. Breed Sci pp.doi: 10.1270/jsbbs.18170     Reference: September 5th, 2019
Gene Product: October 22nd, 2012
Variation: October 23rd, 2012
Gene Model: October 22nd, 2012
61 days agots1 tassel seed1: tassel pistillate and pendant; if removed, small ear with irregular kernel placement develops
2.04 - 2.05
   Stroud, LK; McGinnis, K. 2017. Plant Direct. DOI: 10.1002/pld3.19     Reference: October 21st, 2017
Gene Product: January 3rd, 2018
Variation: September 5th, 2019
61 days agorel2 ramosa1 enhancer locus2: rel2 mutants dramatically increase the formation of long branches in ears of both ra1 and ra2 mutants
10.03
   Liu, X; Galli, M; Camehl, I; Gallavotti, A. 2018. Plant Physiol. 0:doi: 10.1104/pp.18.00913     Reference: March 5th, 2019
Gene Product: October 23rd, 2018
Variation: September 5th, 2019
62 days agoarftf9 ARF-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.04
   Wang, CC et al. 2019. Plant Sci pp.doi; 10.1016/j.plantsci.2019.110248     Reference: September 4th, 2019
Variation: September 25th, 2007
62 days agopcap1 plasma membrane-associated cation-binding protein:
5.04
GRMZM2G071089
Wang, CC et al. 2019. Plant Sci pp.doi; 10.1016/j.plantsci.2019.110248     Reference: September 4th, 2019
Gene Product: September 4th, 2019
Variation: September 1st, 2003
Gene Model: September 4th, 2019
62 days agoglr1 glutamic acid- and lysine-rich1: Encodes a cell membrane localized microtubule-associated protein, that mediated leaf morphogenesis
3.00
GRMZM2G123558
Wang, CC et al. 2019. Plant Sci pp.doi; 10.1016/j.plantsci.2019.110248     Reference: September 4th, 2019
Gene Product: September 4th, 2019
Gene Model: April 3rd, 2018
62 days agopgip1 polygalacturonase-inhibiting protein1:
 
GRMZM2G333980
Zhu, G et al. 2019. Phytopathology pp.doi: 10.1094/PHYTO-01-19-0008-R     Reference: September 4th, 2019
Gene Product: September 4th, 2019
Gene Model: September 4th, 2019
62 days agopgip2 polygalacturonase-inhibiting protein2:
 
GRMZM2G121312
Zhu, G et al. 2019. Phytopathology pp.doi: 10.1094/PHYTO-01-19-0008-R     Reference: September 4th, 2019
Gene Product: September 4th, 2019
Gene Model: September 4th, 2019
62 days agopgip3 polygalacturonase-inhibiting protein3: Over-expression in rice leads to sheath blight resistance
 
GRMZM2G025105
Zhu, G et al. 2019. Phytopathology pp.doi: 10.1094/PHYTO-01-19-0008-R     Reference: September 4th, 2019
Gene Product: September 4th, 2019
Gene Model: September 4th, 2019
62 days agodrepp2 developmentally regulated plasma membrane polypeptide2:
 
GRMZM2G007151
Wang, CC et al. 2019. Plant Sci pp.doi; 10.1016/j.plantsci.2019.110248     Reference: September 4th, 2019
Gene Product: September 4th, 2019
Gene Model: September 4th, 2019
63 days agoumc1369  :
 
GRMZM2G049269
    Variation: September 1st, 2003
Gene Model: September 3rd, 2019
63 days agocl9362_1  :
8.06
GRMZM2G461793
    Variation: September 25th, 2007
Gene Model: September 3rd, 2019
63 days agoIDP1436  :
8.06
GRMZM5G805585
    Variation: March 31st, 2005
Gene Model: September 3rd, 2019
63 days agoIDP1628  :
8.09
GRMZM2G148881
    Variation: March 31st, 2005
Gene Model: September 3rd, 2019
63 days agoIDP2350  :
8.06
GRMZM2G134256
    Variation: March 31st, 2005
Gene Model: September 3rd, 2019
63 days agoIDP2398  :
8.08
GRMZM2G002858
    Variation: March 31st, 2005
Gene Model: September 3rd, 2019
63 days agoIDP2402  :
8.06
GRMZM2G340319
    Variation: March 31st, 2005
Gene Model: September 3rd, 2019
63 days agoIDP27  :
8.06
GRMZM2G472991
    Variation: March 31st, 2005
Gene Model: September 3rd, 2019
63 days agoIDP387  :
8.08
AC204359.3_FG005
    Variation: March 31st, 2005
Gene Model: September 3rd, 2019
63 days agoIDP706  :
8.08
GRMZM2G124047
    Variation: March 31st, 2005
Gene Model: September 3rd, 2019
63 days agoIDP763  :
8.08
GRMZM2G097032
    Variation: March 31st, 2005
Gene Model: September 3rd, 2019
63 days agoIDP771  :
8.06
GRMZM2G112079
    Variation: March 31st, 2005
Gene Model: September 3rd, 2019
64 days agoumc1121  :
8.05
GRMZM2G128658
    Variation: September 1st, 2003
Gene Model: September 2nd, 2019
65 days agocsu829  :
8.05
GRMZM2G042623
    Variation: September 1st, 2003
Gene Model: September 1st, 2019
65 days agoumc1712  :
8.05
GRMZM2G168590
    Variation: September 1st, 2003
Gene Model: September 1st, 2019
65 days agoIDP2365  :
8.05
GRMZM2G176707
    Variation: March 31st, 2005
Gene Model: September 1st, 2019
65 days agoIDP374  :
8.05
GRMZM2G456835
    Variation: March 31st, 2005
Gene Model: September 1st, 2019
66 days agonrx1 nucleoredoxin1: single copy cDNA sequence; thioredoxin-like
1.04
GRMZM2G048324
Cao, HW et al. 2019. Plant Sci pp.doi: 10.1016/j.plantsci.2019.110243     Reference: August 31st, 2019
Gene Product: September 1st, 2003
Variation: September 11th, 2014
Gene Model: September 11th, 2014
Recommended by Ed Coe:
January 8th, 2008
66 days agopdk2 pyruvate, orthophosphate dikinase2: cytosolic
8.04
GRMZM2G097457
Cao, HW et al. 2019. Plant Sci pp.doi: 10.1016/j.plantsci.2019.110243     Reference: August 31st, 2019
Gene Product: July 28th, 2014
Variation: December 19th, 2017
Gene Model: November 21st, 2012
66 days agopgm2 phosphoglucomutase2: electrophoretic mobility; null allele is known; cytosolic; monomeric
5.01
GRMZM2G109383
Cao, HW et al. 2019. Plant Sci pp.doi: 10.1016/j.plantsci.2019.110243     Reference: August 31st, 2019
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: November 28th, 2011
66 days agopdk1 pyruvate, orthophosphate dikinase1: cDNA, genomic and peptide sequences; microsatellite mapped (SSRs phi025, phi078, phi081; nc012 ); cytosolic or plastidic, dependent on transcript processingmutant seedlings are pale green and lethal once kernel reserves are exhaused, even when plants were grown under 2% CO2
6.05
GRMZM2G306345
Cao, HW et al. 2019. Plant Sci pp.doi: 10.1016/j.plantsci.2019.110243     Reference: August 31st, 2019
Gene Product: July 28th, 2014
Variation: April 18th, 2018
Gene Model: November 21st, 2012
66 days agoeno1 enolase1: cDNA clone pZm245 complements enolase mutant in E. coli; leaf cDNA csu158 probes same site
9.02
   Cao, HW et al. 2019. Plant Sci pp.doi: 10.1016/j.plantsci.2019.110243     Reference: August 31st, 2019
Gene Product: September 1st, 2003
Variation: September 25th, 2007
66 days agoumc1605  : NCBI: ankyrin repeat domain-containing protein 2
1.12
GRMZM5G821637
Cao, HW et al. 2019. Plant Sci pp.doi: 10.1016/j.plantsci.2019.110243     Reference: August 31st, 2019
Variation: November 18th, 2016
Gene Model: November 18th, 2016
66 days agovq52 VQ motif-transcription factor52: constitutively expressed in maize tissues, and mainly expressed in the leaf; it is located in the nucleus of maize protoplasts; overexpression in Arabidopsis accelerated premature leaf senescence (Yu et al., 2019)
 
GRMZM2G122447
Yu, TT et al. 2019. PLoS One 14:e0221949     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq1 VQ motif-transcription factor1:
 
GRMZM2G417835
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq2 VQ motif-transcription factor2:
 
GRMZM2G420357
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq3 VQ motif-transcription factor3:
 
GRMZM2G318652
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq4 VQ motif-transcription factor4:
 
GRMZM2G128644
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq5 VQ motif-transcription factor5:
 
GRMZM2G174650
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq6 VQ motif-transcription factor6:
 
GRMZM2G158976
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq7 VQ motif-transcription factor7:
 
GRMZM2G421934
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq8 VQ motif-transcription factor8:
 
GRMZM2G420630
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq9 VQ motif-transcription factor9:
 
GRMZM2G059064
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq10 VQ motif-transcription factor10:
 
GRMZM2G118172
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq11 VQ motif-transcription factor11:
 
GRMZM2G174210
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq12 VQ motif-transcription factor12:
 
AC206638.3_FG007
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq13 VQ motif-transcription factor13:
 
GRMZM2G023921
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq14 VQ motif-transcription factor14:
 
GRMZM2G369742
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq15 VQ motif-transcription factor15:
 
GRMZM2G147443
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq16 VQ motif-transcription factor16:
 
GRMZM2G101409
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq17 VQ motif-transcription factor17:
 
GRMZM2G354123
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq18 VQ motif-transcription factor18:
 
GRMZM2G055404
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq19 VQ motif-transcription factor19:
 
GRMZM2G378442
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq20 VQ motif-transcription factor20:
 
GRMZM2G314520
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq21 VQ motif-transcription factor21:
 
AC194056.3_FG008
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq22 VQ motif-transcription factor22:
 
GRMZM2G066599
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq23 VQ motif-transcription factor23:
 
GRMZM2G322950
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq24 VQ motif-transcription factor24:
 
GRMZM2G153597
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq25 VQ motif-transcription factor25:
 
GRMZM2G010333
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq26 VQ motif-transcription factor26:
 
GRMZM2G124290
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq27 VQ motif-transcription factor27:
 
GRMZM2G129140
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq28 VQ motif-transcription factor28:
 
GRMZM2G325208
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq29 VQ motif-transcription factor29:
 
AC207043.3_FG002
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq30 VQ motif-transcription factor30:
 
GRMZM2G346837
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq31 VQ motif-transcription factor31:
 
GRMZM2G061941
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq32 VQ motif-transcription factor32:
 
GRMZM2G003669
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq33 VQ motif-transcription factor33:
 
GRMZM2G420715
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq34 VQ motif-transcription factor34:
 
GRMZM2G082118
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq35 VQ motif-transcription factor35:
 
GRMZM2G099691
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq36 VQ motif-transcription factor36:
 
GRMZM2G174558
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq37 VQ motif-transcription factor37:
 
GRMZM5G814101
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq38 VQ motif-transcription factor38:
 
GRMZM2G355499
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq39 VQ motif-transcription factor39:
 
GRMZM2G083285
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq40 VQ motif-transcription factor40:
 
GRMZM2G126413
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq41 VQ motif-transcription factor41:
 
GRMZM2G316033
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq42 VQ motif-transcription factor42:
 
GRMZM2G151909
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq43 VQ motif-transcription factor43:
 
GRMZM2G036980
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq44 VQ motif-transcription factor44:
 
GRMZM2G180668
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq45 VQ motif-transcription factor45:
 
AC203294.3_FG012
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq46 VQ motif-transcription factor46:
 
GRMZM5G800535
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq47 VQ motif-transcription factor47:
 
GRMZM2G374336
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq48 VQ motif-transcription factor48:
 
GRMZM5G849527
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq49 VQ motif-transcription factor49:
 
GRMZM5G864059
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq50 VQ motif-transcription factor50:
 
GRMZM2G138370
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq51 VQ motif-transcription factor51:
 
GRMZM2G069169
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq53 VQ motif-transcription factor53:
 
GRMZM2G333049
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq54 VQ motif-transcription factor54:
 
GRMZM2G035531
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq55 VQ motif-transcription factor55:
 
GRMZM2G014839
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq56 VQ motif-transcription factor56:
 
GRMZM2G129815
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq57 VQ motif-transcription factor57:
 
GRMZM5G864133
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq58 VQ motif-transcription factor58:
 
GRMZM2G180262
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq59 VQ motif-transcription factor59:
 
GRMZM2G060720
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq60 VQ motif-transcription factor60:
 
GRMZM2G064903
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agovq61 VQ motif-transcription factor61:
 
GRMZM2G475276
Song, WB et al. 2016. Frontiers Plant Sci pp.doi: 10.3389/fpls.2015.01177     Reference: August 31st, 2019
Gene Product: August 31st, 2019
Gene Model: August 31st, 2019
66 days agoIDP2456  :
8.05
GRMZM2G082792
    Variation: March 31st, 2005
Gene Model: August 31st, 2019
67 days agobr2 brachytic2: like br1; mi1 is allelic and preceded (1935), but br2 name is retained due to long usagelike Arabidopsis ABC transporter B family member 1
1.06 - 1.07
GRMZM2G315375
Li, PC et al. 2019. Genes 10: 664     Reference: August 30th, 2019
Gene Product: May 1st, 2012
Variation: July 15th, 2019
Gene Model: April 28th, 2012
67 days agoumc1302  :
8.03
GRMZM2G062974
    Variation: September 1st, 2003
Gene Model: August 30th, 2019
67 days agoumc1427  :
8.03 - 8.04
GRMZM5G821139
    Variation: September 1st, 2003
Gene Model: August 30th, 2019
67 days agopco077003  :
8.03
GRMZM2G147051
    Variation: September 25th, 2007
Gene Model: August 30th, 2019
68 days agohb1 hemoglobin1: suppression of expression associated with programmed cell death (Huang et al 2014)cDNA sequence; SSR umc1733;cloned hb gene codes for a predicted protein of 164 amino acids
9.06
GRMZM2G067402
Owusu, V et al. 2019. Planta pp.doi: 10.1007/s00425-019-03263-7     Reference: August 29th, 2019
Gene Product: February 20th, 2018
Variation: September 24th, 2010
Gene Model: May 15th, 2014
69 days agoumc1385  :
8.03
AC234185.1_FG004
    Variation: September 1st, 2003
Gene Model: August 28th, 2019
70 days agoAY110113  :
8.03
GRMZM2G053574
    Variation: September 25th, 2007
Gene Model: August 27th, 2019
71 days agogbf1 G-box binding factor1: anoxia induced, nuclear, basic-region leucine zipper protein; low copy number; cDNA clone
6.07
GRMZM2G011932
Cao, LR et al. 2019. Int J Mol Sci pp.doi: 10.3390/ijms20174103     Reference: August 26th, 2019
Gene Product: September 1st, 2003
Variation: December 7th, 2012
Gene Model: July 27th, 2016
71 days agolip15 low temperature-induced protein15: cDNA cross hybridizing to rice lip19, bZIP protein from rabbit reticulocytes or E. coli binds wheat histone H3 gene promoter; single band in Southerns
6.01
GRMZM2G448607
Cao, LR et al. 2019. Int J Mol Sci pp.doi: 10.3390/ijms20174103     Reference: August 26th, 2019
Gene Product: September 1st, 2003
Variation: March 14th, 2007
Gene Model: July 28th, 2016
71 days agobzip22 bZIP-transcription factor 22: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Cao, LR et al. 2019. Int J Mol Sci pp.doi: 10.3390/ijms20174103   AT1G43700 (TAIR) Reference: August 26th, 2019
Gene Product: August 21st, 2018
Variation: September 24th, 2018
71 days agobzip4 bZIP-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Cao, LR et al. 2019. Int J Mol Sci pp.doi: 10.3390/ijms20174103     Reference: August 26th, 2019
Gene Product: August 21st, 2018
Variation: August 21st, 2018
71 days agoobf1 octopine synthase binding factor1: encodes protein with bZIP motif that binds to transcriptional enhancer sequences (ocs-elements); gene specific probe; map location unclearbzip39 locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.05
GRMZM2G479885
Cao, LR et al. 2019. Int J Mol Sci pp.doi: 10.3390/ijms20174103     Reference: August 26th, 2019
Gene Product: September 1st, 2003
Variation: June 29th, 2012
Gene Model: July 28th, 2016
71 days agome3 NADP malic enzyme3: chloroplast C4-photosynthesis, delivers CO2 to ribulose bisphosphate carboylase
3.02
   Alvarez, CE, et al. 2019. Nature Plants. 0:doi:10.1038/s41477-019-0451-7     Reference: August 26th, 2019
Gene Product: June 27th, 2019
Variation: September 1st, 2003
71 days agoohp2 opaque2 heterodimerizing protein2: cDNA sequence, SSRs nc007, phi024
5.01
   Cao, LR et al. 2019. Int J Mol Sci pp.doi: 10.3390/ijms20174103     Reference: August 26th, 2019
Gene Product: September 1st, 2003
Variation: April 25th, 2015
71 days agoembp1 EM binding protein1 homologue: bZIP protein binds to O2 box; wheat EM orthologue
7.02
GRMZM2G095078
Cao, LR et al. 2019. Int J Mol Sci pp.doi: 10.3390/ijms20174103     Reference: August 26th, 2019
Gene Product: August 21st, 2018
Variation: September 5th, 2018
Gene Model: September 5th, 2018
71 days agobzip129 bZIP-transcription factor 129:
 
GRMZM2G024851
Cao, LR et al. 2019. Int J Mol Sci pp.doi: 10.3390/ijms20174103     Reference: August 26th, 2019
Gene Product: August 21st, 2018
Gene Model: August 26th, 2019
71 days agobzip127 bZIP-transcription factor 127: similar to Arabidopsis basic leucine zipper transcription factor-like protein (NCBI)Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.06
GRMZM2G175280
Cao, LR et al. 2019. Int J Mol Sci pp.doi: 10.3390/ijms20174103     Reference: August 26th, 2019
Variation: September 6th, 2017
Gene Model: September 6th, 2017
73 days agoscl1 scarecrow-like1: cDNA sequence
8.03
GRMZM2G023872
Peng, XJ et al. 2019. Plant Cell Rep pp.doi: 10.1007/s00299-019-02458-2     Reference: August 24th, 2019
Gene Product: June 24th, 2019
Variation: August 26th, 2015
Gene Model: August 26th, 2015
73 days agonrp1 no-apical-meristem-related protein1: Involved in coordinating the accumulation of starch and proteins by regulating the expression of key starch biosynthetic enzymes and the major seed proteins (Zhang et al., 2019)
 
GRMZM2G062650
Peng, XJ et al. 2019. Plant Cell Rep pp.doi: 10.1007/s00299-019-02458-2     Reference: August 24th, 2019
Gene Product: July 8th, 2019
Variation: March 31st, 2011
Gene Model: July 28th, 2016
73 days agoinvinh1 invertase inhibitor1: Interacts with incw5 (Zhao et al., 2019)
 
GRMZM2G162447
Chen, L et al. 2019. Int J Mol Sci pp.doi: 10.3390/ijms20174081     Reference: August 24th, 2019
Gene Product: August 7th, 2019
Gene Model: August 7th, 2019
73 days agoinvinh2 invertase inhibitor2:
 
GRMZM2G300141
Chen, L et al. 2019. Int J Mol Sci pp.doi: 10.3390/ijms20174081     Reference: August 24th, 2019
Gene Product: August 7th, 2019
Gene Model: August 24th, 2019
73 days agoinvinh3 invertase inhibitor3:
 
GRMZM2G096897
Chen, L et al. 2019. Int J Mol Sci pp.doi: 10.3390/ijms20174081     Reference: August 24th, 2019
Gene Product: August 7th, 2019
Gene Model: August 24th, 2019
73 days agoinvinh4 invertase inhibitor4: inhibits both cell wall and vacuolar invertase activities from maize leaves
 
GRMZM2G368698
Chen, L et al. 2019. Int J Mol Sci pp.doi: 10.3390/ijms20174081     Reference: August 24th, 2019
Gene Product: August 7th, 2019
Gene Model: August 24th, 2019
74 days agopco107884  :
9.03
GRMZM2G118019
    Variation: September 25th, 2007
Gene Model: August 23rd, 2019
75 days agoo2 opaque endosperm2: like o1; high lysine content; regulates b-32 protein (see rip1); reduced lysine degradation (lysine-ketoglutaric reductase); SSRs phi057, 112
7.01
   Wang, W et al. 2019. Sci. Rep. 9:12265     Reference: August 22nd, 2019
Gene Product: September 1st, 2003
Variation: June 6th, 2016
75 days agobgaf1 beta glucosidase aggregating factor1:
7.02
GRMZM2G172204
Ma, YH et al. 2019. Grassland Sci pp.doi: 10.1111/grs.12246     Reference: August 22nd, 2019
Gene Product: September 1st, 2003
Variation: October 23rd, 2013
Gene Model: October 24th, 2011
75 days agorpl35 60S ribosomal protein L35:
5.04
GRMZM2G043279
Alexandrov, NN, et al. 2009. Plant Mol Biol. 69:179-194     Reference: January 11th, 2009
Gene Product: August 22nd, 2019
Gene Model: June 19th, 2017
75 days agobrd1 brassinosteroid-deficient dwarf1: Mutant plants have essentially no internode elongation and exhibit no etiolation response when germinated in the dark.
 
GRMZM2G103773
Tian, JG, et al. 2019. Science. 365:658-664     Reference: August 22nd, 2019
Gene Product: February 18th, 2012
Variation: August 16th, 2019
Gene Model: February 15th, 2012
75 days agoo*-QCL3024 opaque*-QCL3024: mutant has opaque/high-lysine endosperm
 
   Wang, W et al. 2019. Sci. Rep. 9:12265     Reference: August 22nd, 2019
Variation: February 16th, 2013
75 days agorpl35a 60S ribosomal protein L35a: may be a key gene involved in cold response of maize under low temperature (Ma et al., 2019)
 
   Ma, YH et al. 2019. Grassland Sci pp.doi: 10.1111/grs.12246     Reference: August 22nd, 2019
Gene Product: August 22nd, 2019
79 days agorpo1 RNA polymerase II homolog1: leaf cDNA csu150, similar to yeast RBP2, RNA polymerase
1.08
GRMZM2G113928
Rixmann, C et al. 1992. in Heller, SR et al. 1992. Abstracts, Plant Genome I, San Diego, CA     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: August 18th, 2019
80 days agoago18b argonaute18b: mutant affects length of central tassel branch
1.08
GRMZM2G457370
Sun, W et al. 2019. BMC Genomics pp.doi: 10.1186/s12864-019-6028-z     Reference: August 17th, 2019
Gene Product: August 12th, 2016
Variation: August 17th, 2019
Gene Model: August 12th, 2016
81 days agorca1 RUBISCO activase1: single copy leaf cDNA csu901 smilar to RUBISCO activaseencodes the beta form of RUBISCO activase
4.00
GRMZM2G162282
Zhang, Y et al. 2019. BMC Plant Biology 19:351     Reference: August 16th, 2019
Gene Product: October 28th, 2014
Variation: September 1st, 2003
Gene Model: February 11th, 2014
82 days agohex3 hexokinase3:
8.05
   Aguilera-Alvarado, GP et al. 2019. BMC Plant Biology 19:27     Reference: January 15th, 2019
Gene Product: September 15th, 2013
Variation: August 15th, 2019
85 days agoocl5a outer cell layer5a:
4.04 - 4.05
   Gao, LL et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03405-1     Reference: August 12th, 2019
Gene Product: September 1st, 2003
Variation: August 12th, 2019
85 days agoami4 amidase4:
 
GRMZM2G022192
Lehmann, T et al. 2010. Eur J Cell Biol 89:895-905     Reference: June 4th, 2012
Gene Product: June 4th, 2012
Gene Model: August 12th, 2019
85 days agoami2 amidase5:
 
GRMZM5G819320
Lehmann, T et al. 2010. Eur J Cell Biol 89:895-905     Reference: June 4th, 2012
Gene Product: June 4th, 2012
Gene Model: August 12th, 2019
85 days agoami3 amidase3:
5.07
GRMZM2G159542
Lehmann, T et al. 2010. Eur J Cell Biol 89:895-905     Reference: June 4th, 2012
Gene Product: June 4th, 2012
Gene Model: August 12th, 2019
86 days agoami1 amidase1:
 
GRMZM2G169087
Lehmann, T et al. 2010. Eur J Cell Biol 89:895-905   AT1G08980 (TAIR) Reference: June 4th, 2012
Gene Product: June 4th, 2012
Gene Model: August 11th, 2019
86 days agoami5 amidase2:
 
GRMZM2G448233
Lehmann, T et al. 2010. Eur J Cell Biol 89:895-905   AT1G08980 (TAIR) Reference: June 4th, 2012
Gene Product: June 4th, 2012
Gene Model: August 11th, 2019
87 days agoumc1419  :
2.00 - 2.01
GRMZM2G064202
    Variation: September 1st, 2003
Gene Model: August 10th, 2019
87 days agoacd6 accelerated cell death ortholog6: knockout mutants are more susceptible to Ustilago maydis infection
 
GRMZM2G123977
Zhang, ZQ et al. 2019. Plant Signal Behav pp.doi: 10.1080/15592324.2019.1651604   At4g14400 (TAIR) Reference: August 10th, 2019
Gene Product: August 10th, 2019
Variation: August 10th, 2019
Gene Model: August 10th, 2019
89 days agonfe101 nucleosome/chromatin assembly factor group E (ACF1 homologs) 101:
5.05
GRMZM2G337749
Gendler, K et al. 2008. Nucl Acid Res 36:D298-302     Reference: August 8th, 2019
Variation: September 1st, 2003
Gene Model: August 8th, 2019
90 days agoincw5 invertase cell wall5:
 
GRMZM2G095725
Zhao, HB et al. 2019. Int J Mol Sci 20:3807   LOC_Os04g33740 (MSU/TIGR) Reference: August 7th, 2019
Gene Product: June 12th, 2018
Variation: August 16th, 2017
Gene Model: August 16th, 2017
91 days agonactf135 NAC-transcription factor 135: confers enhanced sensitivity to ABA and osmotic stress
 
   He, L et al. 2019. J Agric Food Chem pp.doi: 10.1021/acs.jafc.9b02331     Reference: August 6th, 2019
Gene Product: July 8th, 2019
3 months agophot1 blue-light receptor phototropin 1: cDNA sequence similar to Arabidopsis NPH1, (GenBank AF039864, AF053941) protein involved in phototropism; SSR umc1062
3.09
   Suzuki, H et al. 2019. J Exp Bot pp.doi: 10.1093/jxb/erz344     Reference: August 5th, 2019
Gene Product: May 13th, 2014
Variation: May 23rd, 2005
3 months agoc3h48 C3H-transcription factor 348: similar to zinc finger CCCH domain-containing protein 46 of A. thaliana
3.09 - 3.10
GRMZM2G044004
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: August 4th, 2019
3 months agoemp5 empty pericarp5: encodes a mitochondrion-targeted DYW subgroup pentatricopeptide repeat (PPR) protein; mutant has empty pericarp phenotype
 
GRMZM2G060536
Wang, Y et al. 2019. PLoS Genetics 15:e1008305     Reference: August 3rd, 2019
Gene Product: December 27th, 2016
Variation: March 12th, 2013
Gene Model: March 11th, 2013
3 months agoemp21 empty pericarp21:
 
GRMZM5G849971
Wang, Y et al. 2019. PLoS Genetics 15:e1008305     Reference: August 3rd, 2019
Gene Product: December 27th, 2016
Variation: August 3rd, 2019
Gene Model: August 3rd, 2019
3 months agoIDP2554  :
9.07
GRMZM2G169384
Wang, Y et al. 2019. PLoS Genetics 15:e1008305     Reference: August 3rd, 2019
Variation: March 31st, 2005
Gene Model: January 24th, 2019
3 months agoserk2 somatic embryogenesis receptor-like kinase2: a single copy DNA with homology to carrot and Arabidopsis SERK genes;SSR umc2304
5.05
   Anderson, AA, et al. 2019. Plant Cell. 0:doi: 10.1105/tpc.18.00840   AT1G71830 (TAIR)
LOC_Os04g38480 (MSU/TIGR)
Reference: August 1st, 2019
Gene Product: September 1st, 2003
Variation: June 11th, 2015
Recommended by Ed Coe:
January 8th, 2008
3 months agodek5 defective kernel5: shrunken endosperm; white seedling with green stripes
3.02
GRMZM2G083374
Zhang, JY, et al. 2019. J Cell Biol. 0:doi: 10.1083/jcb.201807166.     Reference: August 1st, 2019
Gene Product: June 28th, 2019
Variation: June 27th, 2019
Gene Model: June 27th, 2019
3 months agolgn1 liguleless narrow1: Mutant leaves are narrow and branching in the inflorescence is reduced.
 
GRMZM2G134382
Anderson, AA, et al. 2019. Plant Cell. 0:doi: 10.1105/tpc.18.00840     Reference: August 1st, 2019
Gene Product: July 10th, 2019
Variation: January 15th, 2016
Gene Model: January 3rd, 2013
3 months agoepr4 endochitinase precursor4: involved in inducing pathogen defenses and suppressing herbivore defenses
 
GRMZM2G129189
Anderson, AA, et al. 2019. Plant Cell. 0:doi: 10.1105/tpc.18.00840     Reference: August 1st, 2019
Variation: July 14th, 2016
Gene Model: July 14th, 2016
3 months agosol1 sympathy for the ligule1: Mo17-contributed allele suppressed Lgn1-R mutant phenotypes
1.04 - 1.04
GRMZM2G075262
Anderson, AA, et al. 2019. Plant Cell. 0:doi: 10.1105/tpc.18.00840   AT5G05190 (TAIR) Reference: August 1st, 2019
Gene Product: June 21st, 2019
Variation: June 21st, 2019
Gene Model: October 16th, 2017
3 months agobsu1 brassinosteroid insensitive suppressor protein1:
 
GRMZM2G028700
Anderson, AA, et al. 2019. Plant Cell. 0:doi: 10.1105/tpc.18.00840   AT1G08420 (TAIR) Reference: August 1st, 2019
Gene Product: September 1st, 2003
Gene Model: June 21st, 2019
3 months agomkp1 MAP kinase phosphatase1:
 
GRMZM2G005350
Anderson, AA, et al. 2019. Plant Cell. 0:doi: 10.1105/tpc.18.00840   AT3G55270 (TAIR) Reference: August 1st, 2019
Gene Product: June 21st, 2019
Gene Model: June 21st, 2019
3 months agosmk9 small kernel9: mutants exhibit delayed endosperm and embryo development
 
GRMZM2G420723
Pan, ZY et al. 2019. Plant Sci pp.doi; 10.1016/j.plantsci.2019.110205     Reference: July 30th, 2019
Gene Product: December 27th, 2016
Variation: July 30th, 2019
Gene Model: July 30th, 2019
3 months agoppr405 pentatricopeptide repeat protein405: mutants exhibit embryo lethality and albinism
7.04
GRMZM2G158452
Yuan, NN et al. 2019. Plant Sci pp.doi: 10.1016/j.plantsci.2019.110203     Reference: July 29th, 2019
Gene Product: December 27th, 2016
Variation: July 29th, 2019
Gene Model: July 29th, 2019
3 months agobhlh43 bHLH-transcription factor 43: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.08
GRMZM2G165042
Wu, GX et al. 2019. Plant Physiol pp.doi; 10.1104/pp.19.00239     Reference: July 27th, 2019
Variation: September 1st, 2003
Gene Model: July 6th, 2017
3 months agophyB1 phytochromeB1: phyB1 mutants have elongated mesocotyl under red light. Double mutant with phyB2 is pale, narrow with elongated leaf blades, elongated internodes, less anthocyanin in sheath tissues, and earlier flowering time.
1.03
   Wu, GX et al. 2019. Plant Physiol pp.doi; 10.1104/pp.19.00239     Reference: July 27th, 2019
Gene Product: October 24th, 2007
Variation: February 1st, 2015
3 months agopif3 phytochrome interacting factor3: ortholog of Arabidopsis PIF3; nuclear localized protein; transgenic expression in rice suggest role in stress response (Gao Y et al 2015)
 
GRMZM2G387528
Wu, GX et al. 2019. Plant Physiol pp.doi; 10.1104/pp.19.00239   AT1G09530 (TAIR)
LOC_Os05g04740 (MSU/TIGR)
Reference: July 27th, 2019
Gene Product: September 14th, 2016
Gene Model: May 26th, 2015
3 months agophyB2 phytochromeB2: phyB2 mutant is early flowering. Double mutant with phyB1 is pale, narrow with elongated leaf blades and elongated internodes, and contains less anthocyanin in sheath tissues.
9.05
   Wu, GX et al. 2019. Plant Physiol pp.doi; 10.1104/pp.19.00239     Reference: July 27th, 2019
Gene Product: October 24th, 2007
Variation: January 11th, 2013
3 months agolaz1 lazarus ortholog1: functions as a transmembrane organic solute transporter (Liu et al., 2019)
7.03
GRMZM2G025242
Liu, BL et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-10008-z     Reference: July 27th, 2019
Gene Product: July 27th, 2019
Gene Model: September 10th, 2018
3 months agoexpb4 beta expansin4:
7.02
GRMZM2G154178
Wu, GX et al. 2019. Plant Physiol pp.doi; 10.1104/pp.19.00239     Reference: July 27th, 2019
Variation: May 31st, 2010
Gene Model: March 2nd, 2016
3 months agolaz2 lazarus ortholog2: functions as a transmembrane organic solute transporter (Liu et al., 2019)
 
GRMZM2G498656
Liu, BL et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-10008-z     Reference: July 27th, 2019
Gene Product: July 27th, 2019
Gene Model: July 27th, 2019
3 months agolaz3 lazarus ortholog3: functions as a transmembrane organic solute transporter (Liu et al., 2019)
 
GRMZM2G122045
Liu, BL et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-10008-z     Reference: July 27th, 2019
Gene Product: July 27th, 2019
Gene Model: July 27th, 2019
3 months agolaz4 lazarus ortholog4: functions as a transmembrane organic solute transporter (Liu et al., 2019)
 
GRMZM2G100419
Liu, BL et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-10008-z     Reference: July 27th, 2019
Gene Product: July 27th, 2019
Gene Model: July 27th, 2019
3 months agolaz5 lazarus ortholog5: functions as a transmembrane organic solute transporter (Liu et al., 2019)
 
GRMZM2G035445
Liu, BL et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-10008-z     Reference: July 27th, 2019
Gene Product: July 27th, 2019
Gene Model: July 27th, 2019
3 months agolaz6 lazarus ortholog6: functions as a transmembrane organic solute transporter (Liu et al., 2019)
 
GRMZM2G071688
Liu, BL et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-10008-z     Reference: July 27th, 2019
Gene Product: July 27th, 2019
Gene Model: July 27th, 2019
3 months agolaz7 lazarus ortholog7: functions as a transmembrane organic solute transporter (Liu et al., 2019)
 
GRMZM2G078238
Liu, BL et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-10008-z     Reference: July 27th, 2019
Gene Product: July 27th, 2019
Gene Model: July 27th, 2019
3 months agolaz8 lazarus ortholog8: functions as a transmembrane organic solute transporter (Liu et al., 2019)
 
GRMZM2G373717
Liu, BL et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-10008-z     Reference: July 27th, 2019
Gene Product: July 27th, 2019
Gene Model: July 27th, 2019
3 months agolaz9 lazarus ortholog9: functions as a transmembrane organic solute transporter (Liu et al., 2019)
 
GRMZM2G082181
Liu, BL et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-10008-z     Reference: July 27th, 2019
Gene Product: July 27th, 2019
Gene Model: July 27th, 2019
3 months agoago18a argonaute18a:
2.07
   Zhai, LH et al. 2019. Hereditas 156:27     Reference: July 26th, 2019
Gene Product: August 12th, 2016
3 months agoago108 argonaute108:
5.01
GRMZM2G461936
Zhai, LH et al. 2019. Hereditas 156:27     Reference: July 26th, 2019
Gene Product: August 12th, 2016
Variation: September 11th, 2007
Gene Model: August 13th, 2016
3 months agorgd2 ragged seedling2: mutant expression is variable from reduced midrib/moderately narrow leaf to filamentous or even radial leaves
1.04
GRMZM5G852170
Zhai, LH et al. 2019. Hereditas 156:27     Reference: July 26th, 2019
Gene Product: August 12th, 2016
Variation: July 6th, 2010
Gene Model: August 17th, 2017
3 months agoago1d argonaute1d: Ortholog of Arabidopsis ago1
 
GRMZM2G361518
Zhai, LH et al. 2019. Hereditas 156:27   AT1G48410 (TAIR) Reference: July 26th, 2019
Gene Product: August 12th, 2016
Gene Model: February 6th, 2016
3 months agoago1a argonaute1a: Ortholog of Arabidopsis ago1
 
GRMZM2G441583
Zhai, LH et al. 2019. Hereditas 156:27   AT1G48410 (TAIR) Reference: July 26th, 2019
Gene Product: August 12th, 2016
Gene Model: February 6th, 2016
3 months agoago2b argonaute2b:
 
GRMZM2G354867
Zhai, LH et al. 2019. Hereditas 156:27     Reference: July 26th, 2019
Gene Product: August 12th, 2016
Gene Model: August 13th, 2016
3 months agoago4a argonaute4a:
 
GRMZM2G589579
Zhai, LH et al. 2019. Hereditas 156:27     Reference: July 26th, 2019
Gene Product: August 12th, 2016
Gene Model: August 13th, 2016
3 months agoago5b argonaute5b:
 
GRMZM2G059033
Zhai, LH et al. 2019. Hereditas 156:27     Reference: July 26th, 2019
Gene Product: August 12th, 2016
Gene Model: August 13th, 2016
3 months agoago5c argonaute5c:
 
GRMZM2G123063
Zhai, LH et al. 2019. Hereditas 156:27     Reference: July 26th, 2019
Gene Product: August 12th, 2016
Gene Model: August 13th, 2016
3 months agoxa21 Xanthomonas oryzae pv. oryzae resistance ortholog21: transgenic rice showed enhanced resistance to bacterial blight
 
GRMZM2G389948
Gao, Y et al. 2019. Physiol Mol Plant Pathol 108:101429   LOC_Os11g29790 (MSU/TIGR)
Os11g0559200 (Gramene)
Reference: July 26th, 2019
Gene Product: July 10th, 2019
Gene Model: July 26th, 2019
3 months agoprh3 protein phosphatase homolog3:
 
GRMZM2G059453
He, ZH et al. 2019. Int J Mol Sci 20:E3573     Reference: July 25th, 2019
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
3 months agoprh4 protein phosphatase homolog4:
 
GRMZM2G166297
He, ZH et al. 2019. Int J Mol Sci 20:E3573     Reference: July 25th, 2019
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
3 months agoprh8 protein phosphatase homolog8:
 
GRMZM2G122228
He, ZH et al. 2019. Int J Mol Sci 20:E3573     Reference: July 25th, 2019
Gene Product: September 1st, 2003
Gene Model: October 18th, 2016
3 months agosmk4 small kernel4: exclusively localized in mitochondria; mutant abolishes C-to-U editing at position 1489 of the cytochrome c oxidase1 (cox1) transcript, causing an amino acid change from serine to proline at 497
 
GRMZM2G459532
Wang, H-C et al. 2019. J Integr Plant Biol pp.doi: 10.1111/jipb.12856     Reference: July 24th, 2019
Gene Product: December 27th, 2016
Variation: July 24th, 2019
Gene Model: July 24th, 2019
3 months agopza02421  :
4.08
   Bishop, EH et al. 2019. Genomics pp.doi: 10.1016/j.ygeno.2019.07.009     Reference: July 19th, 2019
Gene Product: November 11th, 2017
Variation: September 25th, 2007
3 months agogras10 GRAS-transcription factor 10: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.06
GRMZM2G110579
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: July 19th, 2019
Gene Model: July 19th, 2019
3 months agobaf1 barren stalk fastigiate1: ear shoots often absent, or distorted and fused to culm at base; tassel branches erect, bundled, fused to culm at base
9.02
GRMZM2G072274
Bishop, EH et al. 2019. Genomics pp.doi: 10.1016/j.ygeno.2019.07.009   LOC_Os06g04540 (MSU/TIGR)
Os06g0136900 (Gramene)
Reference: July 19th, 2019
Gene Product: November 11th, 2017
Variation: August 15th, 2011
Gene Model: December 8th, 2014
3 months agoIDP665  :
9.04
AC225193.3_FG003
Bishop, EH et al. 2019. Genomics pp.doi: 10.1016/j.ygeno.2019.07.009     Reference: July 19th, 2019
Variation: March 31st, 2005
Gene Model: January 22nd, 2019
3 months agophd13 PHD-transcription factor 13: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.05
GRMZM2G059266
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: September 1st, 2003
Gene Model: July 18th, 2019
3 months agobnlg1160  :
3.06
GRMZM2G071705
Villajuana-Bonequi, M et al. 2019. Sci. Rep. 9:10227     Reference: July 17th, 2019
Variation: September 1st, 2003
Gene Model: March 21st, 2018
3 months agoumc1323  : NCBI: F-box/LRR-repeat protein 17-like
1.05
GRMZM2G100121
Villajuana-Bonequi, M et al. 2019. Sci. Rep. 9:10227     Reference: July 17th, 2019
Variation: October 18th, 2016
Gene Model: October 20th, 2016
3 months agotubtf6 TUB-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Villajuana-Bonequi, M et al. 2019. Sci. Rep. 9:10227     Reference: July 17th, 2019
Gene Product: September 29th, 2015
3 months agocyc9 cyclin9:
 
GRMZM2G017081
Villajuana-Bonequi, M et al. 2019. Sci. Rep. 9:10227     Reference: July 17th, 2019
Gene Product: June 26th, 2009
Variation: June 6th, 2016
Gene Model: June 6th, 2016
3 months agotubtf9 TUB-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.06
GRMZM2G115701
Villajuana-Bonequi, M et al. 2019. Sci. Rep. 9:10227     Reference: July 17th, 2019
Gene Product: September 29th, 2015
Gene Model: September 29th, 2015
3 months agopgh1 polygalacturonase gene homolog1: functions as a suppressor of programmed cell death induced by at least two autoactive NLR proteins and by two chemical inducers
 
GRMZM2G135763
He, YJ et al. 2019. BMC Plant Biology 19:310     Reference: July 15th, 2019
Gene Product: September 1st, 2003
Variation: July 15th, 2019
Gene Model: July 15th, 2019
3 months agomips1 myo-inositol phosphate synthase1: encodes myo-inositol phosphate synthase; may be involved in kernel phytic acid levels
1.02
GRMZM2G155242
Raboy, V. 1997. US Pat Off p.5689054     Reference: April 22nd, 2013
Gene Product: July 13th, 2019
Variation: April 30th, 2011
Gene Model: April 23rd, 2013
Recommended by Ed Coe:
January 8th, 2008
3 months agobnlg1740  : similar to Arabidopsis Cytochrome b561/ferric reductase transmembrane protein family
6.07
GRMZM2G023133
Chaikam, V et al. 2019. Euphytica 215:138     Reference: July 13th, 2019
Variation: September 1st, 2003
Gene Model: August 29th, 2018
3 months agomthr1 methionine synthase homolog1: leaf cDNA csu194 similar to E. coli metE
5.02
GRMZM2G112149
Chaikam, V et al. 2019. Euphytica 215:138     Reference: July 13th, 2019
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: June 27th, 2018
3 months agomrpa4 multidrug resistance-associated protein 4: Is apparently the locus for which the lpa1-1 mutant leison is located
1.01
GRMZM5G820122
Borlini, G et al. 2019. Plants 8: E209     Reference: July 11th, 2019
Gene Product: July 11th, 2019
Variation: July 12th, 2019
Gene Model: October 17th, 2016
3 months agomrpa10 multidrug resistance protein associated10:
 
AC234203.1_FG004
Goodman, CD; Casati, P; Walbot, V. 2004. Plant Cell. 16:1812-1826     Reference: October 31st, 2009
Gene Product: July 11th, 2019
Gene Model: July 12th, 2019
3 months agog2 golden plant2: (aka g5, pg14, v19, pg-m, bsd1) golden pale-green, weak plants; sheaths whitish yellow-green; pg-m (now g2-pg14::I) of Peterson is a mutable allele that responds to En; small bundle sheath plastids; SSR umc2101, umc2102, umc2103, umc2104, umc2105, umc2106, umc2107, umc2108.pale green seedling lethal, reduced Rubisco and NADP-malic enzyme, small bundle sheath plastids
3.00 - 3.01
GRMZM2G087804
Wang, P et al. 2017. Curr Biol pp.doi: 10.1016/j.cub.2017.09.040     Reference: October 24th, 2017
Gene Product: July 11th, 2019
Variation: October 24th, 2017
Gene Model: August 30th, 2013
3 months agomrpa1 multidrug resistance protein associated1: ATP-binding cassette (ABC) transporter
2.09
GRMZM2G113203
Sun, LL et al. 2018. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2018.05.025     Reference: May 31st, 2018
Gene Product: July 11th, 2019
Variation: July 30th, 2013
Gene Model: February 6th, 2015
3 months agomrpa2 multidrug resistance associated protein2: ATP-binding cassette (ABC) transporter
7.02
GRMZM5G832772
Swarbreck, D; Ripoll, P-J; Brown, DA; Edwards, K; Theodoulou, F. 2003. Gene. 315:153-164     Reference: November 6th, 2009
Gene Product: July 11th, 2019
Variation: January 12th, 2016
Gene Model: January 12th, 2016
3 months agomrpa3 multidrug resistance-associated protein3: Transport of anthocyanin into vacuole
9.02
   Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: July 11th, 2019
Variation: November 11th, 2009
3 months agomrpa5 multidrug resistance-associated protein5:
 
GRMZM2G084181
Goodman, CD; Casati, P; Walbot, V. 2004. Plant Cell. 16:1812-1826     Reference: October 31st, 2009
Gene Product: July 11th, 2019
Variation: May 14th, 2011
Gene Model: October 2nd, 2018
3 months agomrpa6 multidrug resistance associated protein6:
 
GRMZM2G142870
Goodman, CD; Casati, P; Walbot, V. 2004. Plant Cell. 16:1812-1826     Reference: October 31st, 2009
Gene Product: July 11th, 2019
Gene Model: January 12th, 2016
3 months agomrpa7 multidrug resistance associated protein7:
 
GRMZM5G830695
Goodman, CD; Casati, P; Walbot, V. 2004. Plant Cell. 16:1812-1826     Reference: October 31st, 2009
Gene Product: July 11th, 2019
Variation: May 14th, 2011
Gene Model: January 12th, 2016
3 months agomrpa8 multidrug resistance associated protein8:
 
   Goodman, CD; Casati, P; Walbot, V. 2004. Plant Cell. 16:1812-1826     Reference: October 31st, 2009
Gene Product: July 11th, 2019
3 months agomrpa9 multidrug resistance associated protein9:
 
GRMZM2G365957
Goodman, CD; Casati, P; Walbot, V. 2004. Plant Cell. 16:1812-1826     Reference: October 31st, 2009
Gene Product: July 11th, 2019
Gene Model: July 11th, 2019
3 months agoglk58 G2-like-transcription factor 58: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
6.06
GRMZM2G117854
Li, JB et al. 2019. Genet Resour Crop Evol pp.doi: 10.1007/s10722-019-00805-6     Reference: July 11th, 2019
Gene Product: July 25th, 2017
Variation: July 11th, 2019
Gene Model: February 2nd, 2018
3 months agoglk1 G2-like1: g2 golden2 paralog; specifically affects mesophyll chloroplast assembly, but not bundle sheath chloroplast assembly (Wang et al 2013)
9.00
GRMZM2G026833
Wang, P et al. 2017. Curr Biol pp.doi: 10.1016/j.cub.2017.09.040     Reference: October 24th, 2017
Gene Product: July 11th, 2019
Variation: May 9th, 2009
Gene Model: September 27th, 2012
3 months agoptk5 receptor-like kinase4:
8.02
GRMZM2G473511
Feuillet, C. 1999. Proc Natl Acad Sci, USA 96: 8265-8270     Reference: September 1st, 2003
Gene Product: July 10th, 2019
Gene Model: July 1st, 2015
Recommended by Ed Coe:
January 25th, 2007
3 months agovpp2 vacuolar proton pump2: etiolated leaf cDNA, 5' sequence similar to plant vacuolar ATPase, subunit B
9.03
GRMZM2G094497
Li, CH et al. 2016. BMC Genomics 17:894     Reference: July 10th, 2019
Gene Product: September 1st, 2003
Variation: May 15th, 2015
Gene Model: May 15th, 2015
3 months agosrk1 S-receptor kinase1: single copy leaf cDNA, csu811, similar to S-receptor kinase of Brassica; locus is absent from inbred GT119
2.09
AC217293.3_FG007
Qi, FK et al. 2019. Plant Dis pp.doi: 10.1094/PDIS-09-18-1687-RE     Reference: May 14th, 2019
Gene Product: July 10th, 2019
Variation: September 1st, 2003
Gene Model: July 1st, 2015
3 months agoarodh3 arogenate dehydrogenase3: mutants have retarded vegetative growth and opaque endosperm
6.01
   Li, CH et al. 2016. BMC Genomics 17:894     Reference: July 10th, 2019
Gene Product: July 7th, 2018
Variation: July 7th, 2018
3 months agofae2 fatty acid elongase2:
9.03
   Wang, YL et al. 2019. Mol Genet Genomics pp.doi: 10.1007/s00438-019-01586-4     Reference: July 10th, 2019
Variation: January 9th, 2019
3 months agoer3 erecta-like3: EPF/TMM/ERECTA module reflects a conserved, universal mechanism in the plant kingdom. Involved in control stomatal density and distribution
9.03
   Caine, RS et al. 2016. Development 143:3306-3314     Reference: July 10th, 2019
Gene Product: July 10th, 2019
3 months agogl2 glossy2: like gl1, but surface wax is all rice-grain-type particles
2.02
   Li, CH et al. 2016. BMC Genomics 17:894     Reference: July 10th, 2019
Variation: December 7th, 2012
3 months agoltk1 leucine-rich transmembrane protein kinase1: endosperm cDNA, multiple copy; one copy is near pds1
1.02
GRMZM2G153393
Li, Z et al. 1997. Maize Genetics Conference Abstracts 39     Reference: September 1st, 2003
Gene Product: July 10th, 2019
Variation: September 1st, 2003
Gene Model: July 28th, 2016
3 months agoptk3 receptor-like protein kinase3: mature pollen-specific cDNA, single copy, like tomato and Arabidopsis genes
1.06
GRMZM2G151216
Kim, HY et al. 2002. Plant Mol Biol 50:1-16     Reference: September 1st, 2003
Gene Product: July 10th, 2019
Gene Model: July 11th, 2013
3 months agocdj3 chaperone DNA J3: NCBI: putative dnaJ chaperone family protein
5.03
GRMZM2G134980
Li, CH et al. 2016. BMC Genomics 17:894     Reference: July 10th, 2019
Variation: March 24th, 2017
Gene Model: March 24th, 2017
3 months agoald1 aldolase1: cytosolic aldolase; cDNA and genomic clones; Southern blots give single or double band; promoter functional in transient expression assay
8.06
GRMZM2G057823
Li, CH et al. 2016. BMC Genomics 17:894     Reference: July 10th, 2019
Gene Product: September 1st, 2003
Variation: September 16th, 2013
Gene Model: September 15th, 2013
3 months agoumc1444  :
6.01
GRMZM2G473788
Li, CH et al. 2016. BMC Genomics 17:894     Reference: July 10th, 2019
Variation: September 1st, 2003
Gene Model: August 20th, 2018
3 months agoumc1608  :
3.04
GRMZM5G871336
Li, CH et al. 2016. BMC Genomics 17:894     Reference: July 10th, 2019
Variation: September 1st, 2003
Gene Model: April 2nd, 2018
3 months agofarl6 FAR1-like-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, YL et al. 2019. Mol Genet Genomics pp.doi: 10.1007/s00438-019-01586-4     Reference: July 10th, 2019
Gene Product: June 28th, 2019
3 months agobzip89 bZIP-transcription factor 89: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.04
GRMZM2G158313
Li, CH et al. 2016. BMC Genomics 17:894     Reference: July 10th, 2019
Variation: September 1st, 2003
Gene Model: June 28th, 2018
3 months agoptk1 protein kinase1: cDNA, genomic clones homologous to serine/threonine protein kinases (one domain) and to Brassica self-incompatibility locus glycoprotein (a second domain)
6.05
   Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: July 10th, 2019
Variation: February 13th, 2008
3 months agohtn1 Helminthosporium turcicum resistanceN1: formerly HtN; dominant Htn1 plants resistant to Exserohilum turcicum
8.06
GRMZM2G164612
Yang, P et al. 2018. New Phytol pp.doi: 10.1111/nph.15419   At1g66980 (TAIR)
LOC_Os01g49580 (MSU/TIGR)
Reference: September 5th, 2018
Gene Product: July 10th, 2019
Variation: July 14th, 2015
Gene Model: July 1st, 2015
3 months agofea2 fasciated ear2: ear fasciated, broadened and flattened at the tip; rows irregular; similar to CLAVATA 2 of Arabidopsis thaliana
4.05
   Je, BI, et al. 2018. Elife. 7:doi: 10.7554/eLife.35673.001     Reference: February 7th, 2019
Gene Product: July 10th, 2019
Variation: February 11th, 2013
3 months agofea3 fasciated ear3: ear tip broad and branched, typically splitting and showing ring fasciation to form a hollow ear.
 
GRMZM2G166524
Strable, J; Scanlon, MJ. 2016. Nature Genetics. 48:704-5   At3g25670 (TAIR)
LOC_Os01g02060 (MSU/TIGR)
Reference: June 2nd, 2019
Gene Product: July 10th, 2019
Variation: May 18th, 2016
Gene Model: May 18th, 2016
3 months agocps5 chloroplast protein synthesis5: NCBI: putative leucine--tRNA ligase, mitochondrialChloroplast protein synthesis 5: chloroplast leucyl-tRNA synthetase (A. Barkan, 2015)
8.02
GRMZM2G566786
Wang, YL et al. 2019. Mol Genet Genomics pp.doi: 10.1007/s00438-019-01586-4     Reference: July 10th, 2019
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: April 12th, 2017
3 months agophyA1 phytochromeA1: red/far red light signal receptor; major phytochrome A transcript in seedling leaf blade, sheath and mesocotyl under dark light conditions; is greatly reduced in white or red light. See also phyA2, phyB1, phyB2, phyC1, phyC2.
1.10
GRMZM2G157727
Li, CH et al. 2016. BMC Genomics 17:894     Reference: July 10th, 2019
Gene Product: June 30th, 2009
Variation: September 25th, 2007
Gene Model: August 13th, 2014
3 months agowrky98 WRKY-transcription factor 98: NCBI: probable WRKY transcription factor 12 (similarity to Arabidpsis gene)Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.06
GRMZM2G377217
Wang, YL et al. 2019. Mol Genet Genomics pp.doi: 10.1007/s00438-019-01586-4     Reference: July 10th, 2019
Gene Product: July 24th, 2017
Variation: March 15th, 2017
Gene Model: March 15th, 2017
3 months agoltk2 leucine-rich transmembrane protein kinase2: belongs to a small gene family; ltk2 shares 98.6% nucleotide sequence homology with ltk3, and these genes could be products of a recent gene duplication located on chromosome 9L.
9.07
GRMZM2G330907
Li, ZH and Wurtzel, E. 1998. Plant Mol Biol 37:749-761     Reference: September 1st, 2003
Gene Product: July 10th, 2019
Variation: January 10th, 2013
Gene Model: December 27th, 2016
3 months agoAI855190  :
1.05
GRMZM2G443525
Li, CH et al. 2016. BMC Genomics 17:894     Reference: July 10th, 2019
Variation: July 29th, 2004
Gene Model: June 6th, 2017
3 months agomkkk27 MAP kinase kinase kinase27: function inferred from sequence similarity (Kong et al 2013)
2.08
GRMZM2G089159
Wang, YL et al. 2019. Mol Genet Genomics pp.doi: 10.1007/s00438-019-01586-4     Reference: July 10th, 2019
Gene Product: July 10th, 2013
Gene Model: July 11th, 2013
3 months agosln1 sister of liguleless narrow1: A paralog of the lgn1 gene
 
GRMZM2G009506
Moon, J; Candela, H; Hake, S. 2013. Development. 140:405-412     Reference: January 30th, 2013
Gene Product: July 10th, 2019
Gene Model: January 3rd, 2013
3 months agobub1 budding inhibited by benzimidazoles homolog1:
 
GRMZM2G105750
Li, CH et al. 2016. BMC Genomics 17:894     Reference: July 10th, 2019
Gene Product: May 13th, 2014
Variation: January 16th, 2017
Gene Model: January 15th, 2017
3 months agosirk1 sucrose-induced receptor kinase1: expression is altered in response to drought stress
 
GRMZM2G161664
Aquino, B et al. 2017. Frontiers Plant Sci pp.doi: 10.3389/fpls.2017.00852   AT5G10020 (TAIR) Reference: June 14th, 2017
Gene Product: July 10th, 2019
Gene Model: June 13th, 2017
3 months agopspb1 photosystem II oxygen evolving polypeptide1: sequence similar to OEC23 photosystem II polypeptide; located by Huang et al 2013 to thylakoid peripheral on lumen side
 
GRMZM2G016677
Li, CH et al. 2016. BMC Genomics 17:894     Reference: July 10th, 2019
Gene Product: September 1st, 2003
Gene Model: July 15th, 2017
3 months agorlk1 receptor-like protein kinase1: encodes an S-locus receptor-like protein kinase;
 
GRMZM2G099324
Yang, Q, et al. 2017. Nature Genetics. 0:doi: 10.1038/ng.3919     Reference: September 7th, 2017
Gene Product: July 10th, 2019
Variation: July 25th, 2017
Gene Model: July 25th, 2017
3 months agomsp1 multiple sporocyte1: A conserved ligand-receptor pair with mac1
 
GRMZM2G447447
van der Linde, K; Walbot, V. 2019. Current Topics in Developmental Biology 131:239-256   AT5G07280 (TAIR)
LOC_Os01g68870 (MSU/TIGR)
Reference: January 8th, 2019
Gene Product: July 10th, 2019
Gene Model: February 17th, 2018
3 months agomsp2 multiple sporocyte2: A conserved ligand-receptor pair with mac1
 
GRMZM2G306771
van der Linde, K et al. 2018. Plant Cell pp.doi: 10.1105/tpc.17.00238   AT5G07280 (TAIR)
LOC_Os01g68870 (MSU/TIGR)
Reference: February 17th, 2018
Gene Product: July 10th, 2019
Gene Model: February 17th, 2018
3 months agomsp3 multiple sporocyte3: A conserved ligand-receptor pair with mac1
 
GRMZM2G107484
van der Linde, K et al. 2018. Plant Cell pp.doi: 10.1105/tpc.17.00238   AT5G07280 (TAIR)
LOC_Os01g68870 (MSU/TIGR)
Reference: February 17th, 2018
Gene Product: July 10th, 2019
Gene Model: February 17th, 2018
3 months agocrn1 coryne1: involved in shoot apical meristem (SAM) development; functions downstream of fea2; mutants develop fasciated ears
 
GRMZM2G032132
Je, BI, et al. 2018. Elife. 7:doi: 10.7554/eLife.35673.001   AT5G13290 (TAIR) Reference: February 7th, 2019
Gene Product: July 10th, 2019
Gene Model: May 21st, 2018
3 months agoer1 erecta-like1: EPF/TMM/ERECTA module reflects a conserved, universal mechanism in the plant kingdom. Involved in control stomatal density and distribution
 
GRMZM2G463904
Caine, RS et al. 2016. Development 143:3306-3314     Reference: July 10th, 2019
Gene Product: July 10th, 2019
Gene Model: July 10th, 2019
3 months agoepf1 epidermal patterning factor-like1: EPF/TMM/ERECTA module reflects a conserved, universal mechanism in the plant kingdom. Involved in control stomatal density and distribution
 
GRMZM2G177393
Caine, RS et al. 2016. Development 143:3306-3314     Reference: July 10th, 2019
Gene Product: July 10th, 2019
Gene Model: July 10th, 2019
3 months agoepf2 epidermal patterning factor-like2: EPF/TMM/ERECTA module reflects a conserved, universal mechanism in the plant kingdom. Involved in control stomatal density and distribution
 
GRMZM2G431783
Caine, RS et al. 2016. Development 143:3306-3314     Reference: July 10th, 2019
Gene Product: July 10th, 2019
Gene Model: July 10th, 2019
3 months agotmm1 too many mouths-like1: EPF/TMM/ERECTA module reflects a conserved, universal mechanism in the plant kingdom. Involved in control stomatal density and distribution
 
GRMZM2G011401
Caine, RS et al. 2016. Development 143:3306-3314   AT1G80080 (TAIR) Reference: July 10th, 2019
Gene Product: July 10th, 2019
Gene Model: July 10th, 2019
3 months agoer4 erecta-like4: EPF/TMM/ERECTA module reflects a conserved, universal mechanism in the plant kingdom. Involved in control stomatal density and distribution
 
GRMZM2G364977
    Gene Product: July 10th, 2019
Gene Model: July 10th, 2019
3 months agoer2 erecta-like2: EPF/TMM/ERECTA module reflects a conserved, universal mechanism in the plant kingdom. Involved in control stomatal density and distribution
6.05
GRMZM5G809695
Caine, RS et al. 2016. Development 143:3306-3314     Reference: July 10th, 2019
Gene Product: July 10th, 2019
Gene Model: July 10th, 2019
3 months agorop5 Rho-related protein from plants 5:
9.01
GRMZM2G102946
Wang, YL et al. 2019. Mol Genet Genomics pp.doi: 10.1007/s00438-019-01586-4     Reference: July 10th, 2019
Gene Product: April 1st, 2004
Gene Model: January 1st, 2015
4 months agonactf108 NAC-transcription factor 108: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.functions as a negative regulator of the stay‐green trait
 
   Zhang, J et al. 2019. Plant Biotechnol J pp.doi: 10.1111/pbi.13139     Reference: May 4th, 2019
Gene Product: July 8th, 2019
Variation: May 4th, 2019
4 months agonactf129 NAC-transcription factor 129: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G027309
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 8th, 2019
Gene Model: July 2nd, 2019
4 months agonactf130 NAC-transcription factor 130: Involved in coordinating the accumulation of starch and proteins by regulating the expression of key starch biosynthetic enzymes and the major seed proteins (Zhang et al., 2019)
 
   Zhang, ZY; Dong, JQ; Ji, C; Wu, YR; Messing, J. 2019. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.1904995116     Reference: June 25th, 2019
Gene Product: July 8th, 2019
4 months agonactf132 NAC-transcription factor 132: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Estermann, MA et al. 2017. Mol Breed 37:12     Reference: March 3rd, 2017
Gene Product: July 8th, 2019
Variation: March 3rd, 2017
4 months agonactf25 NAC-transcription factor 25: Lines with a MITE insert in the promotor region are more sensitive to drought than those lacking this MITE insert.
 
   Mao, H et al. 2015. Nature Communications 6: 8326   LOC_Os11g03300 (MSU/TIGR) Reference: October 29th, 2015
Gene Product: July 8th, 2019
Variation: September 22nd, 2015
4 months agonactf46 NAC-transcription factor 46: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 8th, 2019
4 months agonactf49 NAC-transcription factor 49: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Estermann, MA et al. 2017. Mol Breed 37:12     Reference: March 3rd, 2017
Gene Product: July 8th, 2019
Variation: March 3rd, 2017
4 months agonactf6 NAC-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to protein ATAF2 of A. thaliana
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 8th, 2019
4 months agonactf60 NAC-transcription factor 60: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 8th, 2019
4 months agonactf69 NAC-transcription factor 69: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G027309
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 8th, 2019
Gene Model: July 6th, 2019
4 months agonactf8 NAC-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 8th, 2019
4 months agonactf82 NAC-transcription factor 82: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhu, YH et al. 2018. Mol Breed 38:125     Reference: September 30th, 2018
Gene Product: July 8th, 2019
Variation: September 30th, 2018
4 months agonactf99 NAC-transcription factor 99: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G078954
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 8th, 2019
Gene Model: May 28th, 2019
4 months agonut1 necrotic upper tips1: Ac-tagged mutation, necrotic upper leaf tips and blasted tassel.
 
GRMZM2G041668
Dong, Zhaobin; et al. 2016. Maize Genetics Conference Abstracts. 58:P191   AT1G12260 (TAIR)
LOC_Os06g01480 (MSU/TIGR)
Reference: June 22nd, 2016
Gene Product: July 8th, 2019
Variation: October 10th, 2018
Gene Model: November 15th, 2017
4 months agoZm00001d037315  : merges v3 gene models GRMZM2G078954 (nactf129), GRMZM2G379608 (nactf69), GRMZM2G086768 (nactf8) and GRMZM2G027309 (nactf99). These were identified as separate transcription factor family genes by the GRASSIUS project (Yilmaz et al 2009)
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 8th, 2019
4 months agoso1 sulfite oxidase1:
1.06
GRMZM2G114739
Xu, ZW et al. 2019. Int J Mol Sci 20:3326     Reference: July 6th, 2019
Gene Product: April 16th, 2013
Gene Model: April 16th, 2013
4 months agotms5 thermosensitive male-sterile5: mutants were fertile at 24C, but male sterile at 32C; exhibit fertility transition at 28C
4.01
GRMZM2G147727
Hu, JC et al. 2019. Mol Plant Pathol pp.doi: 10.1111/mpp.12849   LOC_Os02g12290 (MSU/TIGR)
Os02g0214300 (Gramene)
Reference: July 6th, 2019
Variation: February 24th, 2017
Gene Model: February 24th, 2017
4 months agosid1 sister of indeterminate spikelet1: inflorescence architecture, apparent target of tasselseed4 microRNA (Chuck et al 2008),
 
GRMZM2G176175
Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: July 5th, 2019
Variation: October 17th, 2014
Gene Model: October 16th, 2014
Recommended by Lisa Harper:
September 2nd, 2008
4 months agocg1 corngrass1: semidominant Cg1 plants have narrow leaves, extreme tilleringCg1 encodes two tandem miR156 genes that are overexpressed in the meristem and lateral organs. George Chuck, 2007
3.02
GRMZM2G022489
Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: June 17th, 2016
Variation: August 25th, 2011
Gene Model: April 5th, 2013
Recommended by George Chuck:
September 25th, 2007
4 months agots6 tasselseed6: Recessive alleles have more than two florets per spikelet, and reversed germ orientation. Dominant Ts6 tassels are compact, pistillate to mixed and ears have irregular kernel placement.
1.11
GRMZM5G862109
Wang, J et al. 2019. New Phytol pp.doi: 10.1111/nph.15890     Reference: May 7th, 2019
Gene Product: July 5th, 2019
Variation: December 4th, 2013
Gene Model: July 14th, 2011
Recommended by George Chuck:
September 25th, 2007
4 months agosbp9 SBP-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.01
   Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
4 months agocts1 citrate synthase1: leaf cDNA csu324
5.04
GRMZM2G063851
Eprintsev, AT et al. 2018. Plant Sci 272:157-163     Reference: April 28th, 2018
Gene Product: July 5th, 2019
Variation: June 10th, 2014
Gene Model: June 10th, 2014
4 months agosbp28 SBP-transcription factor 28: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
10.07
GRMZM2G058588
Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
Variation: September 1st, 2003
Gene Model: January 16th, 2018
4 months agosbp6 SBP-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.00
GRMZM2G138421
Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
Variation: September 1st, 2003
Gene Model: June 14th, 2018
4 months agosbp16 SBP-transcription factor16: NCBI: squamosa promoter-binding-like protein 15 Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.06
GRMZM2G169270
Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
Variation: September 1st, 2003
Gene Model: October 29th, 2016
4 months agonot1 neighbor of tga1: compared to tga1, expressed much higher in maize than teosinte; INDEL probe (Preston et al 2011)
 
AC233751.1_FG002
Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
Variation: May 7th, 2015
Gene Model: October 28th, 2011
4 months agosbp2 SBP-domain protein2: cDNA sequence; SSR's umc1573, umc1574, umc1623
4.09
GRMZM2G168229
Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
Variation: October 8th, 2011
Gene Model: December 18th, 2014
4 months agosbp3 SBP-domain protein3: cDNA sequence with SSR's umc1572, umc1595
6.02
GRMZM2G101499
Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
Variation: September 1st, 2003
Gene Model: December 18th, 2014
4 months agosbp4 SBP-domain protein4: cDNA sequence includes SSR's umc1571 and umc1570
9.03
   Cardon, G et al. 1999. Gene 237:91-104     Reference: September 1st, 2003
Gene Product: July 5th, 2019
Variation: September 1st, 2003
4 months agotsh4 tassel sheath4: tsh4 mutant tassels have one to five long tassel branches, instead of ~13 observed in non-mutant W22. In place of tassel branches, long bract leaves were present, clustered at the base of the tassel.
7.03
GRMZM2G307588
Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
Variation: October 8th, 2011
Gene Model: October 6th, 2011
4 months agosbp1 SBP-domain protein1: cDNA sequence, SSR's umc1575, umc1624
5.04
GRMZM2G111136
Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
Variation: October 8th, 2011
Gene Model: December 18th, 2014
4 months agoereb53 AP2-EREBP-transcription factor 53: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Anand, A et al. 2019. Plant Biotechnol J pp.doi: 10.1111/pbi.13089   LOC_Os1g67410 (MSU/TIGR) Reference: February 1st, 2019
Gene Product: July 5th, 2019
4 months agosbp11 SBP-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
4 months agosbp13 SBP-transcription factor 13: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
4 months agosbp17 SBP-transcription factor 17: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
4 months agosbp18 SBP-transcription factor 18: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
4 months agosbp20 SBP-transcription factor 20: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
Variation: February 22nd, 2018
4 months agosbp21 SBP-transcription factor 21: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144   AT1G27370 (TAIR) Reference: July 5th, 2019
Gene Product: July 5th, 2019
4 months agosbp22 SBP-transcription factor 22: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
4 months agosbp23 SBP-transcription factor 23: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
4 months agosbp24 SBP-transcription factor 24: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
4 months agosbp25 SBP-transcription factor 25: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
4 months agosbp27 SBP-transcription factor 27: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
4 months agoub3 unbranched3: double mutant shows decrease in tassel branch number
 
   Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
Variation: December 17th, 2014
4 months agosbp31 SBP-transcription factor 31: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
4 months agosbp4 (GRASSIUS) SBP-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 5th, 2019
4 months agosbp5 SBP-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
4 months agosbp7 SBP-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
4 months agosbp3 (GRASSIUS) SBP-transcription factor 3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.03
GRMZM2G106798
Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
Gene Model: June 11th, 2018
4 months agosbp12 SBP-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.04
GRMZM2G126827
Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
Gene Model: June 27th, 2018
4 months agocts2 citrate synthase2: Tandem duplication 27kb downstream of cts3 based on CornCyc
4.09
GRMZM2G064023
Eprintsev, AT et al. 2018. Plant Sci 272:157-163     Reference: April 28th, 2018
Gene Product: July 5th, 2019
Gene Model: April 27th, 2018
4 months agocts5 citrate synthase5: methylation variation in promoter observed depending on the conditions of the light regime (Eprintsev et al., 2019)
3.05
GRMZM2G034083
Eprintsev, AT et al. 2019. Russ J Plant Physiol 66:259-264     Reference: July 5th, 2019
Gene Product: July 5th, 2019
Gene Model: July 5th, 2019
4 months agodwil1 dwarf & irregular leaf1: mutant plants have shorter internodes, shorter, wider and wrinkled leaves, as well as smaller leaf angle
 
GRMZM2G013657
Jiang, F et al. 2012. PLoS One 7:e37040     Reference: March 12th, 2013
Gene Product: July 5th, 2019
Variation: March 18th, 2013
Gene Model: March 12th, 2013
4 months agosbp19 SBP-transcription factor 19: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.09
GRMZM2G163813
Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
Gene Model: July 11th, 2018
4 months agoznf3 zinc finger protein3:
 
AC206217.2_FG006
Xu, JH et al. 2017. Plant Physiol Biochem 117:51-60     Reference: June 5th, 2017
Gene Product: April 4th, 2017
Gene Model: July 5th, 2019
4 months agocts3 citrate synthase3: Tandem duplication 27kb upstream of cts2 based on CornCyc
 
GRMZM2G063909
Eprintsev, AT et al. 2018. Plant Sci 272:157-163     Reference: April 28th, 2018
Gene Product: July 5th, 2019
Gene Model: April 27th, 2018
4 months agocts4 citrate synthase4:
 
GRMZM2G135588
    Gene Product: July 5th, 2019
Gene Model: April 27th, 2018
4 months agosbp29 SBP-transcription factor 29: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.03
GRMZM2G067624
Peng, XJ et al. 2019. Genet Mol Biol pp.doi: 10.1590/1678-4685-gmb-2017-0144     Reference: July 5th, 2019
Gene Product: July 5th, 2019
Gene Model: July 11th, 2018
4 months agoptf1 Pi starvation-induced transcription factor1: single copy, may be involved in regulating carbohydrate metabolism
9.01 - 9.02
GRMZM2G024530
Li, ZX et al. 2019. J Exp Bot pp.doi: 10.1093/jxb/erz307   LOC_Os02g35660 (MSU/TIGR)
Os02g0564700 (Gramene)
Reference: July 3rd, 2019
Gene Product: September 14th, 2016
Variation: April 23rd, 2011
Gene Model: April 19th, 2011
Recommended by Maria Katherine Mejia-Guerra:
April 18th, 2011
4 months agoz1A-3 alpha zein 19kDa A-3:
 
GRMZM2G059620
Vicuna Requesens, D et al. 2019. Transgenic Research pp.doi: 10.1007/s11248-019-00162-1     Reference: July 3rd, 2019
Gene Product: September 1st, 2003
Gene Model: July 3rd, 2019
4 months agopprsmr1 pentatricopeptide repeat smr1: mutants have empty pericarp
2.02
   Chen, ZL et al. 2019. J Exp Bot pp.doi: 10.1093/jxb/erz305   AT1G79490 (TAIR) Reference: July 1st, 2019
Gene Product: December 27th, 2016
Variation: July 1st, 2019
4 months agorboh4 respiratory burst oxidase4:
4.08
GRMZM2G441541
Liu, YK et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.06.116     Reference: July 1st, 2019
Gene Product: July 15th, 2013
Variation: September 1st, 2003
Gene Model: July 2nd, 2013
4 months agompk1 MAP kinase1: cDNA sequence; single copy
9.06
GRMZM2G053987
Liu, YK et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.06.116     Reference: July 1st, 2019
Gene Product: July 12th, 2013
Variation: January 16th, 2013
Gene Model: July 9th, 2013
4 months agorboh1 respiratory burst oxidase1: mutant displays defects in root hair initiation and elongation manifested by a reduced density and length of root hairs.
3.06
GRMZM2G426953
Liu, YK et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.06.116     Reference: July 1st, 2019
Gene Product: July 15th, 2013
Variation: June 7th, 2014
Gene Model: July 2nd, 2013
4 months agompk7 MAP kinase7:
 
GRMZM2G002100
Liu, YK et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.06.116     Reference: July 1st, 2019
Gene Product: July 12th, 2013
Variation: January 18th, 2013
Gene Model: July 9th, 2013
4 months agorboh3 respiratory burst oxidase3:
 
GRMZM2G043435
Liu, YK et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.06.116     Reference: July 1st, 2019
Gene Product: July 15th, 2013
Gene Model: July 2nd, 2013
4 months agomcsf1 mitochondrial CAF-like splicing factor1: mutants have empty pericarp
 
GRMZM2G087395
Chen, ZL et al. 2019. J Exp Bot pp.doi: 10.1093/jxb/erz305     Reference: July 1st, 2019
Gene Product: July 23rd, 2009
Variation: July 1st, 2019
Gene Model: July 1st, 2019
4 months agorboh2 respiratory burst oxidase2:
3.07
GRMZM2G138152
Liu, YK et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.06.116     Reference: July 1st, 2019
Gene Product: July 15th, 2013
Gene Model: July 2nd, 2013
4 months agod5 dwarf plant5: like d1
2.02
   Best, NB et al. 2017. Plant Direct doi: 10.1002/pld3.9     Reference: June 28th, 2019
Gene Product: September 1st, 2003
Variation: December 3rd, 2015
4 months agona2 nana plant2: like na1
5.03
GRMZM2G057000
Best, NB et al. 2017. Plant Direct doi: 10.1002/pld3.9   AT3G19820 (TAIR) Reference: June 28th, 2019
Gene Product: June 13th, 2016
Variation: June 13th, 2016
Gene Model: June 13th, 2016
4 months agofarl1 FAR1-like-transcription factor 1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 28th, 2019
4 months agofarl10 FAR1-like-transcription factor 10: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 28th, 2019
4 months agofarl11 FAR1-like-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 28th, 2019
4 months agofarl12 FAR1-like-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 28th, 2019
4 months agofarl13 FAR1-like-transcription factor 13: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 28th, 2019
4 months agofarl14 FAR1-like-transcription factor 14: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 28th, 2019
4 months agofarl15 FAR1-like-transcription factor 15: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 28th, 2019
4 months agofarl2 FAR1-like-transcription factor 2: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 28th, 2019
4 months agofarl3 FAR1-like-transcription factor 3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 28th, 2019
4 months agofarl5 FAR1-like-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 28th, 2019
4 months agofarl7 FAR1-like-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 28th, 2019
4 months agofarl8 FAR1-like-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 28th, 2019
4 months agofarl9 FAR1-like-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: June 28th, 2019
4 months agome1 NADP malic enzyme1: coleoptilar, electrophoretic mobility; null allele is known; tetrameric
3.04 - 3.07
   Goodman, MM et al. 1980. Genetics 96:697-710     Reference: September 1st, 2003
Gene Product: June 27th, 2019
4 months agots5 tassel seed5: dominant Ts5 tassels are upright with scattered, short silks; branches mostly pistillate toward the base
4.03 - 4.05
GRMZM2G177668
Lunde, C; Kimberlin, A; Leiboff, S; Koo, AJ; Hake, S. 2019. Communications Biology 2:114     Reference: June 27th, 2019
Gene Product: March 25th, 2019
Variation: March 25th, 2019
Gene Model: March 25th, 2019
4 months agome5 malic enzyme5:
6.05
GRMZM5G886257
Alvarez, CE et al. 2013. Photosynth Res 115:65-80     Reference: August 21st, 2014
Gene Product: June 27th, 2019
Variation: August 16th, 2011
Gene Model: August 27th, 2018
4 months agomlks2 Maize LINC KASH AtSINE-like2: required for normal male meiosis and pollen development and normal stomatal complex development
 
GRMZM2G000608
Gumber, HK, et al. 2019. Nucleus. 10:144-166     Reference: June 27th, 2019
Variation: June 22nd, 2019
Gene Model: June 7th, 2018
4 months agome2 NADP-dependent malic enzyme2: cDNA in roots, preprotein contains chloroplast transit peptide sequences and is imported and processed; C3-like enzyme
6.05
GRMZM2G122479
Borba, AR et al. 2018. Mol Biol Evol pp.doi: 10.1093/molbev/msy060/4962173     Reference: April 6th, 2018
Gene Product: June 27th, 2019
Variation: August 24th, 2014
Gene Model: August 21st, 2014
4 months agome6 NADP-dependent malic enzyme6:
3.07
GRMZM2G159724
Alexandrov, NN, et al. 2009. Plant Mol Biol. 69:179-194     Reference: January 11th, 2009
Gene Product: June 27th, 2019
Variation: August 16th, 2011
Gene Model: August 21st, 2014
4 months agome7 malic enzyme7:
 
       Gene Product: June 27th, 2019
4 months agocyp27 cytochrome P-450 27: close paralog to ts5 (Lunde et al., 2019)
 
GRMZM2G164074
Lunde, C; Kimberlin, A; Leiboff, S; Koo, AJ; Hake, S. 2019. Communications Biology 2:114     Reference: June 27th, 2019
Gene Product: March 25th, 2019
Gene Model: March 25th, 2019
4 months agome4 malic enzyme4: Embryo and root specific; cytosolic
 
GRMZM2G118770
Alvarez, CE et al. 2013. Photosynth Res 115:65-80     Reference: August 21st, 2014
Gene Product: June 27th, 2019
Variation: October 15th, 2010
Gene Model: August 21st, 2014
4 months agogst2 glutathione S-transferase2: safener-induced; heterodimer; 2 map sites have been reported on chr 8 and 10
10.03
GRMZM2G132093
Sekhon, RS et al. 2019. Plant Cell pp.doi: 10.1105/tpc.18.00930     Reference: June 26th, 2019
Gene Product: September 1st, 2003
Variation: July 7th, 2010
Gene Model: October 29th, 2015
4 months agodek10 defective kernel10: collapsed endosperm; lethal; cultured embryos green, curled, stubby; encodes a E-subgroup PPR protein
4.06 - 4.11
GRMZM2G087226
Sekhon, RS et al. 2019. Plant Cell pp.doi: 10.1105/tpc.18.00930     Reference: June 26th, 2019
Gene Product: December 27th, 2016
Variation: February 20th, 2017
Gene Model: February 20th, 2017
4 months agoglu1 beta glucosidase1: electrophoretic mobility; plastidic; dimeric; intralocus hybrid bands occur
10.03
   Czjzek, M et al. 2000. Proc Natl Acad Sci, USA 97:13555-13560     Reference: October 25th, 2011
Gene Product: June 26th, 2019
Variation: January 9th, 2010
4 months agomir3 maize insect resistance3: apoplastic; pest defense protease
 
GRMZM2G166281
Sekhon, RS et al. 2019. Plant Cell pp.doi: 10.1105/tpc.18.00930     Reference: June 26th, 2019
Gene Product: May 23rd, 2019
Variation: August 1st, 2011
Gene Model: February 12th, 2014
4 months agoincw4 invertase cell wall4: genomic sequence (Genbank)similar to Arabidopsis beta-fructofuranosidase, insoluble isoenzyme CWINV3
2.01
GRMZM2G119941
Sekhon, RS et al. 2019. Plant Cell pp.doi: 10.1105/tpc.18.00930     Reference: June 26th, 2019
Gene Product: June 12th, 2018
Variation: May 23rd, 2005
Gene Model: May 27th, 2015
4 months agoglu4 beta-glucosidase4:
8.06
AC155376.2_FG005
Sekhon, RS et al. 2019. Plant Cell pp.doi: 10.1105/tpc.18.00930   AT5G36890 (TAIR)
LOC_Os01g67220 (MSU/TIGR)
Reference: June 26th, 2019
Gene Product: June 26th, 2019
Gene Model: September 24th, 2018
4 months agogst41 glutathione transferase41:
6.05
GRMZM2G097989
Sekhon, RS et al. 2019. Plant Cell pp.doi: 10.1105/tpc.18.00930     Reference: June 26th, 2019
Gene Product: September 1st, 2003
Variation: September 1st, 2010
Gene Model: July 27th, 2016
4 months agodof2 DNA binding with one finger2: cDNA sequence, Southern blots indicate small gene family; transcriptional repressor
2.07
   Sekhon, RS et al. 2019. Plant Cell pp.doi: 10.1105/tpc.18.00930     Reference: June 26th, 2019
Gene Product: September 1st, 2003
Variation: September 1st, 2003
4 months agoglu2 beta-glucosidase2: cDNA produces higher activity in transgenic tobacco; shares 20 amino acids with an N-terminal sequence reported for membrane-bound beta-glucosidase
2.04
   Basse, C. 2005. Plant Physiol. 138:1774-1784     Reference: November 23rd, 2011
Gene Product: June 26th, 2019
Variation: April 16th, 2013
4 months agonta1 N-terminal amidase1: NCBI: CemA-like proton extrusion protein-related
9.08
GRMZM2G110258
Sekhon, RS et al. 2019. Plant Cell pp.doi: 10.1105/tpc.18.00930   At4g34090 (TAIR)
LOC_Os03g01920 (MSU/TIGR)
Reference: June 26th, 2019
Variation: April 21st, 2017
Gene Model: April 21st, 2017
4 months agomlg3 lea protein group3: cDNA similar to wheat Ec; SSR phi070
6.07
   Sekhon, RS et al. 2019. Plant Cell pp.doi: 10.1105/tpc.18.00930     Reference: June 26th, 2019
Gene Product: September 1st, 2003
Variation: September 1st, 2003
4 months agoglu3 beta-glucosidase3:
 
GRMZM2G014844
    Gene Product: June 26th, 2019
Gene Model: January 24th, 2015
4 months agotrps13 trehalose-6-phosphate synthase13:
 
GRMZM2G019183
Sekhon, RS et al. 2019. Plant Cell pp.doi: 10.1105/tpc.18.00930     Reference: June 26th, 2019
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
4 months agobri1a brassinosteroid insensitive1a: Encodes a brassinosteroid receptor
 
GRMZM2G048294
Sekhon, RS et al. 2019. Plant Cell pp.doi: 10.1105/tpc.18.00930   AT4G39400 (TAIR)
LOC_Os01g52050 (MSU/TIGR)
Reference: June 26th, 2019
Variation: July 17th, 2015
Gene Model: July 16th, 2015
4 months agosweet1b sugars will eventually be exported transporter1b: encodes a functional glucose transporter expressed in subsidiary cells; mutants result in reduced stomatal opening
 
GRMZM2G153358
Sekhon, RS et al. 2019. Plant Cell pp.doi: 10.1105/tpc.18.00930     Reference: June 26th, 2019
Gene Product: November 4th, 2015
Variation: April 19th, 2019
Gene Model: November 3rd, 2015
4 months agoIDP694  : similar to B12D protein of A. thaliana
9.00
GRMZM2G027392
Sekhon, RS et al. 2019. Plant Cell pp.doi: 10.1105/tpc.18.00930     Reference: June 26th, 2019
Variation: March 31st, 2005
Gene Model: January 22nd, 2019
4 months agobbx6 b-box6:
 
GRMZM2G422644
Sekhon, RS et al. 2019. Plant Cell pp.doi: 10.1105/tpc.18.00930     Reference: June 26th, 2019
Gene Product: January 11th, 2019
Gene Model: January 10th, 2019
4 months agochr101 chromatin complex subunit A 101: chr101/chr106 double mutant caused embryo lethality with abnormalities in cell proliferation from the early stage of kernel development.
2.10
   Fu, FF; Dawe, RK; Gent, JI. 2018. Plant Cell. 0:doi: 10.1105/tpc.18.00053     Reference: June 24th, 2019
Variation: June 9th, 2018
4 months agogras58 GRAS-transcription factor 58: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.Kranz anatomy; SHR/SCR signaling
 
   Kumar, D; Kellogg, EA. 2018. New Phytol pp.doi: 10.1111/nph.15491     Reference: October 18th, 2018
Gene Product: June 24th, 2019
Variation: April 9th, 2014
4 months agomet2 DNA methyl transferase2:
10.06
GRMZM2G025592
Fu, FF; Dawe, RK; Gent, JI. 2018. Plant Cell. 0:doi: 10.1105/tpc.18.00053     Reference: June 24th, 2019
Gene Product: April 6th, 2018
Variation: November 13th, 2018
Gene Model: November 16th, 2011
4 months agomet5 DNA methyl transferase5:
2.02
GRMZM2G005310
Fu, FF; Dawe, RK; Gent, JI. 2018. Plant Cell. 0:doi: 10.1105/tpc.18.00053     Reference: June 24th, 2019
Gene Product: April 6th, 2018
Variation: June 9th, 2018
Gene Model: December 22nd, 2014
4 months agochr106 chromatin complex subunit A 106: chr101/chr106 double mutant caused embryo lethality with abnormalities in cell proliferation from the early stage of kernel development.
1.10
GRMZM2G071025
Fu, FF; Dawe, RK; Gent, JI. 2018. Plant Cell. 0:doi: 10.1105/tpc.18.00053     Reference: June 24th, 2019
Variation: June 9th, 2018
Gene Model: December 22nd, 2014
4 months agolimtf11 LIM-transcription factor 11: Orthologous to Arabidopsis DA1
 
GRMZM2G017845
Xie, GN et al. 2017. Plant Biotechnol J pp.doi: 10.1111/pbi.12763     Reference: May 31st, 2017
Gene Product: June 24th, 2019
Variation: June 24th, 2019
Gene Model: October 10th, 2012
4 months agogras50 GRAS domain family50: Probe p-cdo344a (rga) is an oat leaf cDNA. Mapped major band to this site.similar to Arabidopsis scarecrow-like protein 30
3.04
GRMZM2G159475
Gray, J et al. 2009. Plant Physiol 149:4-6     Reference: May 6th, 2013
Gene Product: June 24th, 2019
Gene Model: April 9th, 2013
4 months agopr1 red aleurone1: changes purple aleurone to red; encodes flavonoid 3'-hydroxylase
5.05
GRMZM2G025832
Xu, GH et al. 2019. Plant Cell pp.doi: 10.1105/tpc.19.00111     Reference: June 22nd, 2019
Gene Product: June 20th, 2018
Variation: June 10th, 2011
Gene Model: September 22nd, 2011
4 months agofht1 flavanone 3-hydroxylase1: (aka f3h) single copy cDNA similar to Antirrhinum homologsimilar to Naringenin,2-oxoglutarate 3-dioxygenase of A. thaliana
2.01 - 2.02
   Xu, GH et al. 2019. Plant Cell pp.doi: 10.1105/tpc.19.00111     Reference: June 22nd, 2019
Gene Product: June 8th, 2012
Variation: September 1st, 2003
4 months agotps1 terpene synthase1: possible plant defense gene
2.02
GRMZM2G049538
Xu, GH et al. 2019. Plant Cell pp.doi: 10.1105/tpc.19.00111     Reference: June 22nd, 2019
Gene Product: May 28th, 2012
Variation: August 6th, 2013
Gene Model: May 28th, 2012
4 months agomop1 mediator of paramutation1: recessive changes B' phenotype to dark, similar to B1-I
2.04
GRMZM2G042443
Zhang, ZH et al. 2019. Plants 8:E170     Reference: June 20th, 2019
Gene Product: August 8th, 2006
Variation: August 8th, 2006
Gene Model: April 24th, 2013
Recommended by Ed Coe:
January 8th, 2008
4 months agodcl4 dicer-like4: (was rgd*-N766B) like rgd1
1.09
GRMZM2G050869
Zhang, ZH et al. 2019. Plants 8:E170     Reference: June 20th, 2019
Gene Product: September 5th, 2006
Variation: July 27th, 2015
Gene Model: July 27th, 2015
4 months agodcl104 dicer-like 104:
 
GRMZM5G814985
Zhang, ZH et al. 2019. Plants 8:E170     Reference: June 20th, 2019
Gene Product: September 5th, 2006
Variation: January 29th, 2015
Gene Model: January 29th, 2015
4 months agodcl105 dicer-like 105:
 
GRMZM2G301405
Zhang, ZH et al. 2019. Plants 8:E170     Reference: June 20th, 2019
Gene Product: September 5th, 2006
Variation: January 29th, 2015
Gene Model: January 29th, 2015
4 months agordr6 RNA-dependent RNA polymerase6: mutant seedlings with reduced fully abaxialized organs that arrest shortly after germination
 
GRMZM2G082437
Zhang, ZH et al. 2019. Plants 8:E170     Reference: June 20th, 2019
Gene Product: August 8th, 2006
Variation: July 29th, 2015
Gene Model: July 27th, 2015
4 months agoago1b argonaute1b: Ortholog of Arabidopsis ago1
 
AC209206.3_FG011
Zhang, ZH et al. 2019. Plants 8:E170   AT1G48410 (TAIR) Reference: June 20th, 2019
Gene Product: August 12th, 2016
Gene Model: February 6th, 2016
4 months agoago1c argonaute1c: Ortholog of Arabidopsis ago1
 
GRMZM2G039455
Zhang, ZH et al. 2019. Plants 8:E170   AT1G48410 (TAIR) Reference: June 20th, 2019
Gene Product: August 12th, 2016
Gene Model: February 6th, 2016
4 months agoago2a argonaute2a:
 
GRMZM2G007791
Zhang, ZH et al. 2019. Plants 8:E170     Reference: June 20th, 2019
Gene Product: August 12th, 2016
Gene Model: August 13th, 2016
4 months agoago6 argonaute6:
 
GRMZM2G347402
Zhang, ZH et al. 2019. Plants 8:E170     Reference: June 20th, 2019
Gene Product: August 12th, 2016
Gene Model: August 13th, 2016
4 months agoago10b argonaute10b:
 
GRMZM2G079080
Zhang, ZH et al. 2019. Plants 8:E170     Reference: June 20th, 2019
Gene Product: August 12th, 2016
Gene Model: August 13th, 2016
4 months agordr1 RNA-dependent RNA polymerase1:
 
GRMZM2G109787
Zhang, ZH et al. 2019. Plants 8:E170     Reference: June 20th, 2019
Gene Product: August 8th, 2006
Gene Model: June 20th, 2019
4 months agordr2 RNA-dependent RNA polymerase2:
 
GRMZM2G357825
Zhang, ZH et al. 2019. Plants 8:E170     Reference: June 20th, 2019
Gene Product: August 8th, 2006
Gene Model: June 20th, 2019
4 months agordr3 RNA-dependent RNA polymerase3:
 
GRMZM2G347931
Zhang, ZH et al. 2019. Plants 8:E170     Reference: June 20th, 2019
Gene Product: August 8th, 2006
Gene Model: June 20th, 2019
4 months agoago101 argonaute101:
9.03
AC189879.3_FG003
Zhang, ZH et al. 2019. Plants 8:E170     Reference: June 20th, 2019
Gene Product: August 12th, 2016
Variation: September 11th, 2007
Gene Model: January 30th, 2015
4 months agoago104 argonaute104:
6.07
GRMZM2G141818
Zhang, ZH et al. 2019. Plants 8:E170     Reference: June 20th, 2019
Gene Product: August 12th, 2016
Variation: September 4th, 2013
Gene Model: March 31st, 2011
4 months agodcl101 dicer-like 101: mutant plants have 'fuzzy tassel' and reduced stature.
1.01
GRMZM2G040762
Zhang, ZH et al. 2019. Plants 8:E170     Reference: June 20th, 2019
Gene Product: September 5th, 2006
Variation: December 4th, 2014
Gene Model: November 12th, 2014
4 months agodcl102 dicer-like 102:
1.07
GRMZM2G413853
Zhang, ZH et al. 2019. Plants 8:E170     Reference: June 20th, 2019
Gene Product: September 5th, 2006
Variation: September 11th, 2007
Gene Model: January 29th, 2015
4 months agopin4 PIN-formed protein4: auxin efflux carriter similar to Arabidopsis PIN1 (Forestan et al 2012), but from PIN clade not found in all flowering plants save for the Brassicacease (O'Connor 2014 et al
4.08
GRMZM2G171702
Li, ZX et al. 2019. Plant Signal Behav 17:1-5     Reference: June 19th, 2019
Gene Product: April 21st, 2014
Gene Model: January 24th, 2013
4 months agopin2 PIN-formed protein2: see pin1
5.06
GRMZM2G074267
Li, ZX et al. 2019. Plant Signal Behav 17:1-5     Reference: June 19th, 2019
Gene Product: April 21st, 2014
Variation: June 11th, 2007
Gene Model: June 7th, 2012
4 months agomybr96 MYB-related-transcription factor 96: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.03
   Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Variation: September 25th, 2007
4 months agoremo4 remorin4:
7.04
GRMZM2G081949
Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Variation: September 1st, 2003
Gene Model: September 11th, 2018
4 months agoiaa4 Aux/IAA-transcription factor4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.10
GRMZM2G159285
Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Variation: November 15th, 2016
Gene Model: November 15th, 2016
4 months agocol16 C2C2-CO-like-transcription factor 16:
1.06
GRMZM2G159996
Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Gene Product: June 18th, 2018
Variation: December 7th, 2016
Gene Model: December 7th, 2016
4 months agophyA2 phytochromeA2: red/far red light signal receptor; minor phytochrome A trancript in dark grown seedling leaf blade, sheath, mesocotyl. See also phyA1, phyB1, phyB2, phyC1, phyC2
5.01
GRMZM2G181028
Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Gene Product: June 30th, 2009
Variation: September 1st, 2003
Gene Model: August 13th, 2014
4 months agofht2 flavanone 3-hydroxylase2:
1.04
GRMZM2G382569
Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Gene Product: June 8th, 2012
Gene Model: June 7th, 2017
4 months agodbb1 double B-box zinc finger protein1:
2.04
GRMZM2G018876
Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Gene Product: May 10th, 2017
Variation: May 10th, 2017
Gene Model: May 10th, 2017
4 months agomeg5 maternally expressed gene5: Maternally transmitted alleles preferentially expressed in endosperm
7.01
GRMZM2G354335
Gutierrez-Marcos, J, et al. 2004. Plant Cell. 16:1288-1301     Reference: October 15th, 2009
Variation: August 29th, 2014
Gene Model: June 17th, 2019
4 months agovt2 vanishing tassel2: inflorescence development; TRP-dependent auxin synthesis
 
GRMZM2G127308
Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142   AT1G70560 (TAIR) Reference: June 17th, 2019
Gene Product: April 30th, 2011
Variation: June 24th, 2011
Gene Model: May 2nd, 2012
4 months agoga20ox3 gibberellin 20-oxidase3:
 
GRMZM2G368411
Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Gene Product: October 28th, 2014
Gene Model: October 29th, 2014
4 months agodbb7 double B-box zinc finger protein7:
 
GRMZM2G110541
Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Gene Product: May 10th, 2017
Gene Model: May 10th, 2017
4 months agoxer3 xerico3:
 
GRMZM2G005840
Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Gene Product: September 14th, 2017
Variation: September 14th, 2017
Gene Model: September 14th, 2017
4 months agofkf1 flavin-binding kelch repeat f-box1: Involved in regulating the circadian clock and photoperiodic flowering
 
GRMZM2G107945
Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Gene Product: July 25th, 2017
Gene Model: December 12th, 2017
4 months agotoc2 timing of cab expression2: Ortholog of Arabidopsis toc1
 
GRMZM2G148453
Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142   AT5G61380 (TAIR) Reference: June 17th, 2019
Gene Product: January 11th, 2018
Gene Model: January 11th, 2018
4 months agophyC1 phytochromeC1: red/far red light signal receptor; major phytochrome C trancript in light and dark grown seedling leaf blade, sheath, mesocotyl. See also phyC2, phyA1, phyA2 phyB1, phyB2.
1.10
   Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Gene Product: June 30th, 2009
Variation: June 30th, 2009
4 months agosmk6 small kernel6: encodes a mitochondrion-localized PPR protein that mediates the C-to-U editing at multiple sites
 
GRMZM2G010046
Ding, S et al. 2019. J Plant Physiol pp.doi: 10.1016/j.jplph.2019.152992     Reference: June 14th, 2019
Gene Product: December 27th, 2016
Variation: June 14th, 2019
Gene Model: June 14th, 2019
4 months agonactf23 NAC-transcription factor 23: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. similar to protein ATAF2 of A. thaliana
8.08
GRMZM2G068973
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: March 31st, 2005
Gene Model: June 14th, 2019
4 months agodek40 defective kernel40: encodes a cytosol-localized proteasome biogenesis-associated chaperone (PBAC4)
 
GRMZM2G019538
Wang, GF et al. 2019. Plant Physiol pp.doi: 10.1104/pp.18.01419     Reference: June 13th, 2019
Gene Product: June 13th, 2019
Variation: June 13th, 2019
Gene Model: June 13th, 2019
4 months agomads67 MADS-transcription factor 67: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.04
GRMZM2G147716
Anderson, JA et al. 2019. J Agric Food Chem pp.doi: 10.1021/acs.jafc.9b00391     Reference: June 12th, 2019
Gene Product: September 1st, 2003
Gene Model: February 7th, 2019
4 months agodek44 defective kernel44: encodes mitochondrial ribosomal protein L9
 
GRMZM5G866627
Qi, WW et al. 2019. Plant Physiol pp.doi: 10.1104/pp.19.00546     Reference: June 11th, 2019
Gene Product: June 11th, 2019
Variation: June 11th, 2019
Gene Model: June 11th, 2019
4 months agovg1 vestigial glume1: dominant Vg1 glumes very small, cob and anthers exposed; upper leaves have scant ligules
1.07
GRMZM2G079805
Liu, CX et al. 2019. Crop J. doi: 10.1016/j.cj.2019.04.001     Reference: June 10th, 2019
Gene Product: June 10th, 2019
Variation: September 1st, 2003
Gene Model: June 10th, 2019
4 months agodmp1 DUF679 domain membrane protein1: mutants enhance haploid induction
 
GRMZM2G465053
Zhong, Y et al. 2019. Nature Plants 5:575-580     Reference: June 10th, 2019
Gene Product: June 10th, 2019
Variation: June 10th, 2019
Gene Model: June 10th, 2019
4 months agoras8A1 ras-related protein8A1:
 
GRMZM5G886109
    Variation: January 20th, 2011
Gene Model: June 9th, 2019
5 months agoan1 anther ear1: andromonoecious dwarf, intermediate stature; few tassel branches; responds to gibberellins; an1-6923 includes deletion of Bz2+
1.08
GRMZM2G081554
Heuermann, MC et al. 2019. Plant J pp.doi: 10.1111/tpj.14431     Reference: June 8th, 2019
Gene Product: August 16th, 2012
Variation: June 8th, 2019
Gene Model: November 7th, 2011
5 months agow2 white seedling2: white seedling (yellow with l1); endosperm pitted and spotted (allele dek21); plastid DNA content decreasedChloroplast DNA polymerase. Required for chloroplast DNA replication. (A. Barkan, 2015)
10.07 - 10.07
GRMZM2G480171
Heuermann, MC et al. 2019. Plant J pp.doi: 10.1111/tpj.14431     Reference: June 8th, 2019
Gene Product: September 19th, 2012
Variation: June 8th, 2019
Gene Model: September 19th, 2012
5 months agopcr2 protochlorophyllide reductase2:
 
GRMZM2G036455
Zhan, W et al. 2019. Plant J pp.doi: 10.1111/tpj.14432     Reference: June 8th, 2019
Gene Product: June 8th, 2019
Gene Model: October 4th, 2017
5 months agopcr3 protochlorophyllide reductase3: localized in chloroplast; overexpression increased tocopherol content in leaves and kernels (Zhan et al., 2019)
 
GRMZM2G073351
Zhan, W et al. 2019. Plant J pp.doi: 10.1111/tpj.14432     Reference: June 8th, 2019
Gene Product: June 8th, 2019
Variation: June 8th, 2019
Gene Model: October 4th, 2017
5 months agopcr1 protochlorophyllide reductase1: leaf cDNA csu349 similar to plant protochlorophyllide reductase
2.01
GRMZM2G084958
Zhan, W et al. 2019. Plant J pp.doi: 10.1111/tpj.14432     Reference: June 8th, 2019
Gene Product: June 8th, 2019
Variation: February 25th, 2013
Gene Model: October 8th, 2014
5 months agopin12 PIN-formed protein12: similar to Arabidopsis PIN10 (Forestan et al 2012)
9.02
GRMZM2G160496
Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: April 21st, 2014
Gene Model: January 24th, 2013
5 months agozep1 zeaxanthin epoxidase1:
2.04
GRMZM2G127139
Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: December 10th, 2011
Variation: August 29th, 2011
Gene Model: April 8th, 2013
5 months agoaic1 auxin import carrier1: cDNA encoding a protein with a deduced amino acid showing 73% identity to AtAUX1.
1.05
GRMZM2G129413
Lu, CC et al. 2019. Frontiers Plant Sci 10:716   AT2G21050 (TAIR) Reference: June 6th, 2019
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: November 21st, 2015
5 months agotar1 tryptophan aminotransferase related1:
6.05
GRMZM2G127160
Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: April 30th, 2011
Gene Model: June 4th, 2012
5 months agode18 defective18: Defective kernel: seed weight less than half of normal (B37) (Torti et al. 1984)
10.03
GRMZM2G091819
Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: June 18th, 2018
Variation: January 21st, 2016
Gene Model: September 11th, 2012
5 months agoabh1 abscisic acid 8'-hydroxylase1:
 
GRMZM2G179147
Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: February 15th, 2013
Variation: September 1st, 2011
Gene Model: February 15th, 2013
5 months agoyuc2 Yucca2:
 
GRMZM2G159393
Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: June 18th, 2018
Gene Model: September 12th, 2012
5 months agoyuc3 Yucca3: Function of 109945481 is defined as "probable indole-3-pyruvate monooxygenase YUCCA10?? (EHC Jul 2019)
 
GRMZM2G107761
Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: June 18th, 2018
Gene Model: September 12th, 2012
5 months agopin10 PIN-formed protein10: similar to Arabidopsis PIN10 (Forestan et al 2012)
 
GRMZM2G126260
Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: April 21st, 2014
Gene Model: January 24th, 2013
5 months agoyuc4 Yucca4: up-regulated by light irradiation in the 0-1mm tip region
 
GRMZM2G141383
Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: June 18th, 2018
Gene Model: June 17th, 2016
5 months agoyuc6 Yucca6: transcribed in the root apex (0-5mm)
 
GRMZM2G019515
Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: June 18th, 2018
Gene Model: June 17th, 2016
5 months agoyuc7 yucca7:
 
GRMZM2G480386
Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: June 18th, 2018
Gene Model: August 19th, 2017
5 months agoyuc8 yucca8:
 
GRMZM2G017193
Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: June 18th, 2018
Gene Model: August 19th, 2017
5 months agoprh20 protein phosphatase homolog20:
 
GRMZM2G300125
Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: September 1st, 2003
Gene Model: January 19th, 2018
5 months agoabh4 abscisic acid 8'-hydroxylase4:
7.02
GRMZM2G065928
Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: February 15th, 2013
Variation: March 31st, 2005
Gene Model: July 7th, 2017
5 months agoao1 aldehyde oxidase1: functionally cloned (Sekimoto et al 1997)
1.11
GRMZM2G141535
Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: May 2nd, 2012
Variation: May 30th, 2012
Gene Model: October 4th, 2014
5 months agovp14 viviparous14: viviparous; yellow endosperm; abscisic acid biosynthesis; SSR umc1218
1.08
GRMZM2G014392
Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: September 20th, 2012
Variation: June 25th, 2007
Gene Model: May 13th, 2011
5 months agoyuc5 Yucca5: transcribed in the root apex (0-5mm)
7.02
GRMZM2G132489
Lu, CC et al. 2019. Frontiers Plant Sci 10:716     Reference: June 6th, 2019
Gene Product: June 18th, 2018
Gene Model: June 17th, 2016
5 months agozip1 zinc-regulated, iron-regulated transporter-like protein1:
 
GRMZM2G001803
Li, SZ et al. 2013. BMC Plant Biology 13:114     Reference: June 5th, 2019
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
5 months agozip2 zinc-regulated, iron-regulated transporter-like protein2:
 
   Li, SZ et al. 2013. BMC Plant Biology 13:114     Reference: June 5th, 2019
Gene Product: June 5th, 2019
5 months agozip3 zinc-regulated, iron-regulated transporter-like protein3:
 
GRMZM2G045849
Li, SZ et al. 2013. BMC Plant Biology 13:114     Reference: June 5th, 2019
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
5 months agozip4 zinc-regulated, iron-regulated transporter-like protein4:
 
GRMZM2G111300
Li, SZ et al. 2013. BMC Plant Biology 13:114     Reference: June 5th, 2019
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
5 months agozip6 zinc-regulated, iron-regulated transporter-like protein6:
 
GRMZM2G034551
Li, SZ et al. 2013. BMC Plant Biology 13:114     Reference: June 5th, 2019
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
5 months agozip7 zinc-regulated, iron-regulated transporter-like protein7:
 
GRMZM2G015955
Li, SZ et al. 2013. BMC Plant Biology 13:114     Reference: June 5th, 2019
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
5 months agozip8 zinc-regulated, iron-regulated transporter-like protein8:
 
GRMZM2G093276
Li, SZ et al. 2013. BMC Plant Biology 13:114     Reference: June 5th, 2019
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
5 months agoakin2 AKINbetagamma-1 protein kinase2:
1.03
   Kumar, R et al. 2019. Plant Cell Environ pp.doi: 10.1111/pce.13599     Reference: June 4th, 2019
Gene Product: December 31st, 2018
Variation: September 25th, 2007
5 months agosweet1a sugars will eventually be exported transporter1a:
3.06
GRMZM2G039365
Kumar, R et al. 2019. Plant Cell Environ pp.doi: 10.1111/pce.13599     Reference: June 4th, 2019
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
5 months agoact1 actin1: actin, one of six potential genes; genomic DNA clone; 3 introns); SSR phi115
8.03 - 8.04
   Kumar, R et al. 2019. Plant Cell Environ pp.doi: 10.1111/pce.13599     Reference: June 4th, 2019
Gene Product: September 1st, 2003
Variation: September 4th, 2013
5 months agoelfa9 elongation factor 1-alpha9: shares 89-99% nucleotide sequence identity with genes elf1a to alf1g (aka clones eEF1Aa to eEF1Ag).
9.03
GRMZM2G153541
Kumar, R et al. 2019. Plant Cell Environ pp.doi: 10.1111/pce.13599     Reference: June 4th, 2019
Gene Product: September 1st, 2003
Variation: April 14th, 2014
Gene Model: April 15th, 2014
5 months agosut1 sucrose transporter1: mutant plants are deficient in leaf sucrose unloading to pholem; mature leaves hyperaccumulate carbohydrates and display leaf chlorosis with premature senescence
1.02
GRMZM2G034302
Kumar, R et al. 2019. Plant Cell Environ pp.doi: 10.1111/pce.13599     Reference: June 4th, 2019
Gene Product: September 14th, 2013
Variation: April 16th, 2013
Gene Model: April 16th, 2013
5 months agosut2 sucrose transporter2: mutants grow slower and have increased sugar content in leaves
3.04
GRMZM2G307561
Kumar, R et al. 2019. Plant Cell Environ pp.doi: 10.1111/pce.13599     Reference: June 4th, 2019
Gene Product: September 14th, 2013
Variation: February 20th, 2017
Gene Model: April 17th, 2013
5 months agotrps1 trehalose-6-phosphate synthase1:
 
GRMZM2G068943
Kumar, R et al. 2019. Plant Cell Environ pp.doi: 10.1111/pce.13599     Reference: June 4th, 2019
Gene Product: September 15th, 2013
Gene Model: May 28th, 2012
5 months agotrpp8 trehalose-6-phosphate phosphatase8:
 
GRMZM2G174396
Kumar, R et al. 2019. Plant Cell Environ pp.doi: 10.1111/pce.13599     Reference: June 4th, 2019
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
5 months agotrps7 trehalose-6-phosphate synthase7:
 
GRMZM2G123277
Kumar, R et al. 2019. Plant Cell Environ pp.doi: 10.1111/pce.13599     Reference: June 4th, 2019
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
5 months agosweet2 sugars will eventually be exported transporter2: similar to nodulin MtN3-like protein of A. thaliana
 
GRMZM2G324903
Kumar, R et al. 2019. Plant Cell Environ pp.doi: 10.1111/pce.13599     Reference: June 4th, 2019
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
5 months agotrpp6 trehalose-6-phosphate phosphatase6: similar to Arabidopsis haloacid dehalogenase-like hydrolase domain-containing protein
5.06
GRMZM2G112830
Kumar, R et al. 2019. Plant Cell Environ pp.doi: 10.1111/pce.13599     Reference: June 4th, 2019
Gene Product: September 15th, 2013
Gene Model: February 7th, 2018
5 months agosmd1 suppressor of meiotic drive1: preferential segregation of knobs and loci linked to knobs associated with Abnormal chromosome 10 (Ab10)
10.06
   Dawe, RK, et al. 2018. Cell. 173:doi: 10.1016/j.cell.2018.03.009     Reference: June 3rd, 2019
Variation: April 7th, 2018
5 months agosmd12 suppressor of meiotic drive12: preferential segregation of knobs and loci linked to knobs associated with Abnormal chromosome 10 (Ab10)
 
   Dawe, RK, et al. 2018. Cell. 173:doi: 10.1016/j.cell.2018.03.009     Reference: June 3rd, 2019
Variation: April 7th, 2018
5 months agoki1 Kindr-RNAi1: preferential segregation of knobs and loci linked to knobs associated with Abnormal chromosome 10 (Ab10)
 
   Dawe, RK, et al. 2018. Cell. 173:doi: 10.1016/j.cell.2018.03.009     Reference: June 3rd, 2019
Variation: April 8th, 2018
5 months agofcp1 fon2-like cle protein1: mutants have a fasciated ear phenotype
 
GRMZM2G165836
Strable, J; Scanlon, MJ. 2016. Nature Genetics. 48:704-5   LOC_Os04g39770 (MSU/TIGR)
Os04g0473800 (Gramene)
Reference: June 2nd, 2019
Gene Product: May 21st, 2016
Variation: April 15th, 2019
Gene Model: May 21st, 2016
5 months agons2 narrow sheath2: embryonic transcription factor; duplicate factor with ns1; closely related to 2 other WOX3 genes, wox3a and wox3b, aka hb82, hb16 (Grassius named)
4.08
   Shimizu, R; Ji, J; Schnable, PS; Scanlon, MJ. 2009. Annu Rev Plant Physiol Plant Mol Biol. 149:841-50     Reference: June 1st, 2019
Gene Product: August 25th, 2017
Variation: June 29th, 2005
5 months agora3 ramosa3: branched inflorescence; mutant ears have abnormal long branches at their bases; trehalose biosynthesis
7.06
   Claeys, H, et al. 2019. Nature Plants. 0:doi: 10.1038/s41477-019-0394-z     Reference: June 1st, 2019
Gene Product: September 15th, 2013
Variation: December 3rd, 2010
5 months agotrpp4 trehalose-6-phosphate phosphatase4: double mutants with ra3 give a more extreme phenotype
4.08
GRMZM2G151044
Claeys, H, et al. 2019. Nature Plants. 0:doi: 10.1038/s41477-019-0394-z     Reference: June 1st, 2019
Gene Product: September 15th, 2013
Variation: April 2nd, 2019
Gene Model: June 7th, 2018
5 months agons1 narrow sheath1: plant brachytic, duplicate factor with ns2; leaf sheath and blade taper, blade widens toward tip; husks narrowed, ears exposed
2.05
   Shimizu, R; Ji, J; Schnable, PS; Scanlon, MJ. 2009. Annu Rev Plant Physiol Plant Mol Biol. 149:841-50     Reference: June 1st, 2019
Gene Product: August 25th, 2017
Variation: February 20th, 2015
5 months agotrpp12 trehalose-6-phosphate phosphatase12:
 
GRMZM2G178546
Claeys, H, et al. 2019. Nature Plants. 0:doi: 10.1038/s41477-019-0394-z     Reference: June 1st, 2019
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
5 months agotrpp13 trehalose-6-phosphate phosphatase13:
 
GRMZM5G890599
Claeys, H, et al. 2019. Nature Plants. 0:doi: 10.1038/s41477-019-0394-z     Reference: June 1st, 2019
Gene Product: September 15th, 2013
Gene Model: April 2nd, 2019
5 months agotrpp14 trehalose-6-phosphate phosphatase14:
 
   Claeys, H, et al. 2019. Nature Plants. 0:doi: 10.1038/s41477-019-0394-z     Reference: June 1st, 2019
Gene Product: September 15th, 2013
5 months agoras11G1 ras-related protein11G1:
 
AC197246.3_FG001
Zhang, XG et al. 2019. J Plant Biol 62:217-228     Reference: May 31st, 2019
Variation: January 24th, 2011
Gene Model: September 1st, 2017
5 months agocpps2 copalyl diphosphate synthase2: encodes ent-kaurene synthase, a copalyl diphosphate synthase protein having close identity with An1 gene product; likely duplicate function explains why an1 plants are not fully dwarfed (Harris et al. 2005)
1.04
GRMZM2G044481
Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: August 16th, 2012
Variation: January 22nd, 2018
Gene Model: September 12th, 2011
Recommended by Ed Coe:
January 8th, 2008
5 months agovpp1 vacuolar proton pump homolog1: glucose-starved root tip cDNA closely similar to Oryza gene (TIGR match)
6.04
GRMZM2G148200
Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: August 25th, 2018
5 months agod8 dwarf plant8: Dominant D8 plants resemble d1; extreme alleles not responsive to gibberellins.
1.09
GRMZM2G144744
Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: February 12th, 2007
Variation: August 29th, 2007
Gene Model: May 11th, 2011
5 months agoga2ox1 gibberellin 2-oxidase1: Bolduc and Hake (Plant Cell 21:1647-58, 2009) identify this ga2ox as ga2ox1 by phylogeny. See Supplemental Figure 6. Comparison of syntenic regions containing ga2ox1 in different grasses. They also show that it is a direct target of KN1.
 
GRMZM2G078798
Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: October 27th, 2014
Variation: November 20th, 2012
Gene Model: November 20th, 2012
5 months agoo5 opaque endosperm5: like o1; virescent to yellow or white seedlings
7.02
GRMZM2G142873
Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: June 17th, 2011
Variation: August 29th, 2011
Gene Model: September 19th, 2011
5 months agows1 white sheath1: light yellow leaf sheaths; duplicate factor with ws2.
 
   Clark, FH. 1932. J Hered. 23:235-237     Reference: May 29th, 2019
Variation: September 1st, 2003
5 months agows3 white sheath3: white leaf sheath, culm, husks; seedlings often virescent
2.01
   Clark, FH. 1932. J Hered. 23:235-237     Reference: May 29th, 2019
Variation: September 1st, 2003
5 months agows2 white sheath2: light yellow leaf sheaths; duplicate factor with ws1
 
   Clark, FH. 1932. J Hered. 23:235-237     Reference: May 29th, 2019
Variation: September 1st, 2003
5 months agoarftf11 ARF-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Variation: July 7th, 2017
5 months agoexpa1 alpha expansin1: belongs to a multigene family and probably exists as a single copy.
3.06
   Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: March 12th, 2008
Variation: September 1st, 2003
5 months agocki1 cyclin-dependent kinase inhibitor1:
1.08
GRMZM2G116885
Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: March 8th, 2017
Variation: December 6th, 2016
Gene Model: December 6th, 2016
5 months agobif2 barren inflorescence2: recessive few-branched tassel, normally no pollen shed; variable expression on ear with 0-2 spikelets produced at each floral node
1.05
   Zhang, XR et al. 2019. Plant Sci 283:177-188   AT2G34650 (TAIR) Reference: May 29th, 2019
Gene Product: July 19th, 2012
Variation: October 23rd, 2013
5 months agoga20ox1 gibberellin 20-oxidase1:
1.12
AC203966.5_FG005
Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: October 28th, 2014
Gene Model: October 27th, 2014
5 months agoko1 kaurene oxidase1:
 
GRMZM2G059308
Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: October 27th, 2014
Gene Model: October 27th, 2014
5 months agoga20ox2 gibberellin 20-oxidase2:
 
GRMZM2G021051
Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: October 28th, 2014
Gene Model: October 27th, 2014
5 months agoga2ox8 gibberellin 2-oxidase8:
 
GRMZM2G155686
Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: October 27th, 2014
Gene Model: October 27th, 2014
5 months agoatl1 auxin transporter-like1: mutant tassels have reduced branch numbers; bald tip on ears with fewer spikelets per row, and agravitropic root growth
 
GRMZM2G127949
Zhang, XR et al. 2019. Plant Sci 283:177-188   AT2G38120 (TAIR)
LOC_Os01g63770 (MSU/TIGR)
Reference: May 29th, 2019
Gene Product: April 19th, 2017
Variation: April 19th, 2017
Gene Model: March 12th, 2015
5 months agopht10 phosphate transporter protein10:
 
GRMZM2G075870
Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: June 16th, 2016
Gene Model: June 16th, 2016
5 months agocki3 cyclin-dependent kinase inhibitor3:
 
GRMZM2G157510
Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: March 8th, 2017
Variation: May 4th, 2017
Gene Model: March 7th, 2017
5 months agoprh17 protein phosphatase homolog17: responds to Pi starvation
 
GRMZM2G164352
Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: September 1st, 2003
Variation: April 28th, 2017
Gene Model: April 28th, 2017
5 months agovpp7 vacuolar proton pump7: SNP; NCBI defines as a vacuolar proton pump-like protein
 
GRMZM2G069095
Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: September 1st, 2003
Gene Model: August 25th, 2018
5 months agosqd1 sulfolipid biosynthesis1:
 
GRMZM2G053322
Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: December 1st, 2018
Gene Model: December 1st, 2018
5 months agomco1 multicopper oxidase1:
 
GRMZM2G086727
Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: May 29th, 2019
Gene Model: May 29th, 2019
5 months agotir2 transport inhibitor response2:
 
GRMZM2G155849
Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: July 25th, 2017
Gene Model: May 29th, 2019
5 months agovpp9 vacuolar proton pump9:
 
GRMZM2G069410
Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: August 16th, 2016
Gene Model: May 29th, 2019
5 months agocki5 cyclin-dependent kinase inhibitor5:
5.07
GRMZM2G101613
Zhang, XR et al. 2019. Plant Sci 283:177-188     Reference: May 29th, 2019
Gene Product: March 8th, 2017
Gene Model: March 7th, 2017
5 months agomez2 enhancer of zeste2:
9.04
GRMZM5G875502
Ni, JC et al. 2019. Planta pp.doi: 10.1007/s00425-019-03193-4     Reference: May 27th, 2019
Gene Product: September 1st, 2003
Variation: January 13th, 2019
Gene Model: January 13th, 2019
5 months agomez1 enhancer of zeste1:
6.01
   Ni, JC et al. 2019. Planta pp.doi: 10.1007/s00425-019-03193-4     Reference: May 27th, 2019
Gene Product: June 30th, 2017
Variation: July 3rd, 2015
5 months agomez3 enhancer of zeste3:
1.03
GRMZM2G043484
Ni, JC et al. 2019. Planta pp.doi: 10.1007/s00425-019-03193-4     Reference: May 27th, 2019
Gene Product: June 30th, 2017
Variation: September 1st, 2014
Gene Model: September 2nd, 2014
5 months agofie1 fertilization independent endosperm1:
4.05
   Ni, JC et al. 2019. Planta pp.doi: 10.1007/s00425-019-03193-4     Reference: May 27th, 2019
Gene Product: September 1st, 2003
Variation: December 4th, 2012
5 months agofie2 fertilization independent endosperm2:
10.03
   Ni, JC et al. 2019. Planta pp.doi: 10.1007/s00425-019-03193-4     Reference: May 27th, 2019
Gene Product: September 1st, 2003
Variation: May 27th, 2014
5 months agonfc103a nucleosome/chromatin assembly factor C:
1.08
GRMZM2G090217
Ni, JC et al. 2019. Planta pp.doi: 10.1007/s00425-019-03193-4     Reference: May 27th, 2019
Variation: September 1st, 2003
Gene Model: December 11th, 2012
5 months agonfc103b nucleosome/chromatin assembly factor C:
5.03
GRMZM2G320606
Ni, JC et al. 2019. Planta pp.doi: 10.1007/s00425-019-03193-4     Reference: May 27th, 2019
Variation: September 1st, 2003
Gene Model: December 11th, 2012
5 months agovef101a  :
7.02
GRMZM2G157422
Ni, JC et al. 2019. Planta pp.doi: 10.1007/s00425-019-03193-4     Reference: May 27th, 2019
Variation: September 1st, 2003
Gene Model: May 27th, 2019
5 months agorbap2 WD-repeat protein RBAP2: first reported as a partial cDNA clone, AF250048, showing high sequence homology with genes rbap1 and rbap3.
3.07
GRMZM2G137965
Ni, JC et al. 2019. Planta pp.doi: 10.1007/s00425-019-03193-4     Reference: May 27th, 2019
Variation: September 1st, 2003
Gene Model: December 10th, 2012
5 months agonfc104a nucleosome/chromatin assembly factor 104: First identified by the Maize Chromatin Project, who supplied map scores to the Maize Mapping Project towards placement on the CIMDE IBM maps.
7.06
GRMZM2G032711
Ni, JC et al. 2019. Planta pp.doi: 10.1007/s00425-019-03193-4     Reference: May 27th, 2019
Variation: September 1st, 2003
Gene Model: December 11th, 2012
5 months agoga1 gametophyte factor1: (was ga9) Ga1 pollen grains are competitively superior to ga1 on Ga1 silks; Ga1-S (strong) super-gametophyte
4.02 - 4.03
   Lu, Y et al. 2019. Nature communications 10:2304     Reference: May 24th, 2019
Variation: June 22nd, 2005
5 months agotcb1 teosinte crossing barrier1: Barrier to crossing of maize onto Central Plateau teosinte - transferred to maize with linked positive modifiers, fails to accept any pollen, including Ga1-s
4.04
   Lu, Y et al. 2019. Nature communications 10:2304     Reference: May 24th, 2019
Gene Product: September 10th, 2018
Variation: May 24th, 2019
5 months agopme3 pectin methylesterase3: present and expressed only in Ga1-s genotypes; mutationally inactivated version present in Ga1-m
 
   Lu, Y et al. 2019. Nature communications 10:2304     Reference: May 24th, 2019
Gene Product: September 10th, 2018
5 months agodek41 defective kernel41: mutations cause reduced splicing efficiency of mitochondrial nad4 intron 3, resulting in severely reduced complex I assembly and NADH dehydrogenase activity
 
GRMZM2G127015
Ren, RC et al. 2019. J Integr Plant Biol pp.doi: 10.1111/jipb.12843     Reference: May 24th, 2019
Gene Product: December 27th, 2016
Variation: May 24th, 2019
Gene Model: April 25th, 2019
5 months agoccp2 cysteine protease2: mRNA differentially enhanced in late- vs. early-senescing lines; similarity to rice oryzain gamma (cysteine protease) and castor bean vacuolar processing enzyme
7.02
   Schulze Huynck, J et al. 2019. Frontiers Plant Sci 10:473     Reference: May 23rd, 2019
Gene Product: May 23rd, 2019
Variation: July 30th, 2011
5 months agomir1 maize insect resistance1: single copy cDNA
6.02
   Castano-Duque, L et al. 2017. J Chem Ecol pp.doi: 10.1007/s10886-017-0904-2     Reference: November 21st, 2017
Gene Product: May 23rd, 2019
Variation: November 21st, 2017
5 months agoccp3 cysteine protease3: apoplastic; cysteine protease
10.07
GRMZM2G073465
Schulze Huynck, J et al. 2019. Frontiers Plant Sci 10:473     Reference: May 23rd, 2019
Gene Product: May 23rd, 2019
Variation: September 1st, 2003
Gene Model: January 16th, 2018
5 months agotraf8 TNF receptor-associated factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.,
 
GRMZM2G026556
Dong, L et al. 2019. Int J Mol Sci 20:2472     Reference: May 21st, 2019
Gene Product: May 23rd, 2019
Gene Model: May 20th, 2019
5 months agotraf7 TNF receptor-associated factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.,
 
GRMZM2G022606
Dong, L et al. 2019. Int J Mol Sci 20:2472     Reference: May 21st, 2019
Gene Product: May 23rd, 2019
Gene Model: May 20th, 2019
5 months agodogt1 deoxynivalenol-glucosyltransferase1:
 
GRMZM2G403740
Dong, L et al. 2019. Int J Mol Sci 20:2472     Reference: May 21st, 2019
Gene Product: May 23rd, 2019
Gene Model: May 20th, 2019
5 months agocxe18 carboxyesterase18:
 
GRMZM2G104141
Dong, L et al. 2019. Int J Mol Sci 20:2472     Reference: May 21st, 2019
Gene Product: May 23rd, 2019
Gene Model: May 20th, 2019
5 months agoccp6 cysteine protease6: novel root specific apoplastic papain-like cysteine protease (PLCP) that shows a distinct substrate specificity and inhibitory profile
 
GRMZM2G340065
Schulze Huynck, J et al. 2019. Frontiers Plant Sci 10:473     Reference: May 23rd, 2019
Gene Product: May 23rd, 2019
Gene Model: May 23rd, 2019
5 months agoccp4 cysteine protease4: apoplastic; pest defense response
7.03
GRMZM2G108849
Schulze Huynck, J et al. 2019. Frontiers Plant Sci 10:473     Reference: May 23rd, 2019
Gene Product: May 23rd, 2019
Gene Model: February 13th, 2014
5 months agoccp5 cysteine protease5: apoplastic; response to U. maydis infection
6.01
GRMZM2G066326
Schulze Huynck, J et al. 2019. Frontiers Plant Sci 10:473     Reference: May 23rd, 2019
Gene Product: May 23rd, 2019
Variation: March 31st, 2005
Gene Model: February 13th, 2014
5 months agoccp1 cysteine protease1: seed cDNA sequence
5.04
   Zaidi, PH et al. 2015. PLoS One 10:e0124350     Reference: April 18th, 2015
Gene Product: May 23rd, 2019
Variation: May 20th, 2015
5 months agothp*-MCP10A thiol protease MCP10A: cDNA sequence similar to barley cysteine protease; copy number less than 5
 
   Pechan, T et al. 1999. Plant Mol Biol 40:111-119     Reference: September 1st, 2003
Gene Product: May 23rd, 2019
5 months agoamt8 ammonium transporter8: similar to Arabidopsis ammonium transporter 2
1.11
GRMZM5G883969
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: July 8th, 2013
Gene Model: October 19th, 2017
5 months agoumc1991  : Similar to Arabidopsis MATE efflux family protein (multidrug and toxic compound extrusion (MATE) family)NCBI: transparent testa 12 protein
1.08
GRMZM5G842695
Dong, L et al. 2019. Int J Mol Sci 20:2472     Reference: May 21st, 2019
Variation: December 27th, 2016
Gene Model: December 27th, 2016
5 months agoumc1995  :
10.04
GRMZM2G343291
Dong, L et al. 2019. Int J Mol Sci 20:2472     Reference: May 21st, 2019
Variation: September 1st, 2003
Gene Model: December 15th, 2017
5 months agonrt2 nitrate transport2:
4.11
GRMZM2G010280
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Variation: May 9th, 2018
Gene Model: May 9th, 2018
5 months agocsu221  :
4.00
GRMZM2G131409
Dong, L et al. 2019. Int J Mol Sci 20:2472     Reference: May 21st, 2019
Variation: September 1st, 2003
Gene Model: April 17th, 2018
5 months agoAI676903  :
5.00
GRMZM5G862317
Dong, L et al. 2019. Int J Mol Sci 20:2472     Reference: May 21st, 2019
Variation: July 29th, 2004
Gene Model: June 13th, 2018
5 months agoamt5 ammonium transporter5:
10.04
GRMZM2G164743
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: July 8th, 2013
Gene Model: December 29th, 2017
5 months agoamt1 ammonium transporter1:
 
GRMZM2G175140
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
5 months agoamt2 ammonium transporter2:
 
GRMZM2G028736
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
5 months agoamt3 ammonium transporter3:
 
GRMZM2G118950
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
5 months agonrt1 nitrate transport1:
 
GRMZM2G010251
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: September 10th, 2014
5 months agonrt4 nitrate transport4:
 
GRMZM2G163494
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: September 10th, 2014
5 months agonrt3 nitrate transport3:
 
GRMZM2G163866
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: September 10th, 2014
5 months agonpf2 nitrate transporter/peptide transporter family2: encodes a a pH dependent non-biphasic high-affinity nitrate-specific transport protein
 
GRMZM2G161459
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0   AT1G12110 (TAIR) Reference: May 21st, 2019
Gene Product: September 1st, 2003
Variation: September 11th, 2017
Gene Model: September 11th, 2017
5 months agonpf3 nitrate transporter/peptide transporter family3:
 
GRMZM2G112154
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: May 10th, 2018
5 months agonpf4 nitrate transporter/peptide transporter family4:
 
GRMZM2G161483
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: May 10th, 2018
5 months agonpf5 nitrate transporter/peptide transporter family5:
 
GRMZM2G161483
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: May 10th, 2018
5 months agoamt4 ammonium transporter4:
 
GRMZM2G062024
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: July 8th, 2013
Gene Model: May 10th, 2018
5 months agogpat6 glycerol-3-phosphate acyltransferase6:
 
GRMZM2G033767
Dong, L et al. 2019. Int J Mol Sci 20:2472     Reference: May 21st, 2019
Gene Product: March 25th, 2019
Gene Model: March 25th, 2019
5 months agonpf6 nitrate transporter/peptide transporter family6:
 
GRMZM2G137421
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: May 21st, 2019
5 months agonpf7 nitrate transporter/peptide transporter family7:
 
GRMZM2G064091
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: May 21st, 2019
5 months agonpf8 nitrate transporter/peptide transporter family8:
 
GRMZM2G476069
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: May 21st, 2019
5 months agonpf9 nitrate transporter/peptide transporter family9:
 
GRMZM2G176253
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: May 21st, 2019
5 months agonpf10 nitrate transporter/peptide transporter family10:
 
GRMZM2G044851
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: May 21st, 2019
5 months agonpf11 nitrate transporter/peptide transporter family11:
 
GRMZM2G061303
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: May 21st, 2019
5 months agonrt5 nitrate transport5:
 
GRMZM2G455124
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: September 1st, 2003
Gene Model: May 21st, 2019
5 months agoamt6 ammonium transporter6:
 
GRMZM2G080045
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: July 8th, 2013
Gene Model: May 21st, 2019
5 months agoamt7 ammonium transporter7:
 
GRMZM2G335218
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: July 8th, 2013
Gene Model: May 21st, 2019
5 months agoamt9 ammonium transporter9:
 
GRMZM2G043193
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: July 8th, 2013
Gene Model: May 21st, 2019
5 months agoamt10 ammonium transporter10:
 
GRMZM2G473697
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0     Reference: May 21st, 2019
Gene Product: July 8th, 2013
Gene Model: May 21st, 2019
5 months agonpf1 nitrate transporter/peptide transporter family1: encodes a low-affinity nitrate transporter with efflux activity; switches to a high-affinity chloride selective transporter, when supplied chloride.
10.03
GRMZM2G086496
Dechorgnat, J et al. 2019. BMC Plant Biology pp.doi: 10.1186/s12870-019-1768-0   AT1G12110 (TAIR) Reference: May 21st, 2019
Gene Product: September 1st, 2003
Variation: September 11th, 2017
Gene Model: September 11th, 2017
5 months agocpd33 carbohydrate partitioning defective33: mutants accumulate excess starch and soluble sugars in mature leaves
 
GRMZM5G852378
Tran, TM et al. 2019. Molecular Plant pp.doi: 10.1016/j.molp.2019.05.001     Reference: May 17th, 2019
Gene Product: May 20th, 2019
Variation: May 17th, 2019
Gene Model: May 17th, 2019
5 months agovp15 viviparous15: Viviparous with yellow endosperm; Vp15 encodes a plant MPT synthase small subunit (ZmCNX7)
5.05
   Wang, YJ et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-09977-y     Reference: May 15th, 2019
Gene Product: February 22nd, 2007
Variation: July 27th, 2009
Recommended by Marty Sachs:
March 7th, 2007
5 months agomus2 MutS homolog2: NCBI: DNA mismatch repair protein MSH7
3.02 - 3.03
GRMZM2G110212
Wang, YJ et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-09977-y     Reference: May 15th, 2019
Gene Product: August 15th, 2005
Variation: January 28th, 2013
Gene Model: August 5th, 2015
5 months agoumc1350  :
6.07
GRMZM2G038284
Wang, YJ et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-09977-y     Reference: May 15th, 2019
Variation: September 1st, 2003
Gene Model: August 29th, 2018
5 months agodof25 C2C2-Dof-transcription factor 25: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, YJ et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-09977-y     Reference: May 15th, 2019
Gene Product: May 15th, 2019
5 months agozfl1 zea floricaula/leafy1: zfl1 and zfl2 double mutants exhibit a disruption of floral organ identity and patterning, as well as defects in inflorescence architecture and in the vegetative to reproductive phase transition.
10.06
   Wang, YJ et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-09977-y     Reference: May 15th, 2019
Variation: February 20th, 2007
5 months agocyp8 cytochrome P-450 8: developing inflorescence, cDNA clone, assayed in transgenic yeast microsomes
1.08
   Wang, YJ et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-09977-y   LOC_Os10g26340 (MSU/TIGR) Reference: May 15th, 2019
Gene Product: September 1st, 2003
Variation: October 24th, 2012
5 months agoifa1 indeterminate floral apex1: mutants have perturbed floral and inflorescence meristems as well as droopy leaves with increased angle
 
GRMZM2G088309
Wang, YJ et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-09977-y   AT1G69180 (TAIR)
LOC_Os03g11600 (MSU/TIGR)
Reference: May 15th, 2019
Gene Product: October 16th, 2015
Variation: July 13th, 2017
Gene Model: October 16th, 2015
5 months agoIDP727  : similar to xyloglucan:xyloglucosyl transferase of A. thaliana
7.03
GRMZM2G413044
Wang, YJ et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-09977-y     Reference: May 15th, 2019
Variation: March 31st, 2005
Gene Model: February 5th, 2019
5 months agonldr2 NBS-LRR disease resistance protein2: appears to be involved in the response to Sporisorium reilianum infection
 
GRMZM2G047152
Qi, FK et al. 2019. Plant Dis pp.doi: 10.1094/PDIS-09-18-1687-RE     Reference: May 14th, 2019
Gene Product: May 14th, 2019
Gene Model: May 14th, 2019
5 months agonldr1 NBS-LRR disease resistance protein1: appears to be involved in the response to Sporisorium reilianum infection
 
GRMZM2G078013
Qi, FK et al. 2019. Plant Dis pp.doi: 10.1094/PDIS-09-18-1687-RE     Reference: May 14th, 2019
Gene Product: May 14th, 2019
Gene Model: May 14th, 2019
5 months agoemp602 empty pericarp602: mutants have an empty pericarp; loss of mature Nad4 transcripts
 
GRMZM2G464510
Ren, ZJ et al. 2019. Plant Cell Physiol pp.doi: 10.1093/pcp/pcz083   AT1G02420 (TAIR)
LOC_Os03g11020 (MSU/TIGR)
Reference: May 13th, 2019
Gene Product: December 27th, 2016
Variation: May 13th, 2019
Gene Model: May 13th, 2019
6 months agohmg13 HMG-transcription factor 13: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: May 8th, 2019
6 months agobhlh172 bHLH-transcription factor 172: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Kurt, F et al. 2019. BioMetals doi: 10.1007/s10534-019-00199-z   AT1G51070 (TAIR) Reference: May 8th, 2019
Gene Product: September 14th, 2016
6 months agoaasr3 abscisic acid stress ripening3:
2.04
GRMZM5G806182
Liang, YN et al. 2019. Int J Mol Sci 20:2278     Reference: May 8th, 2019
Gene Product: December 1st, 2011
Gene Model: January 2nd, 2019
6 months agoereb160 AP2-EREBP-transcription factor 160: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
9.01
GRMZM2G171179
Yu, F et al. 2019. Plant Biotechnol J pp.doi: 10.1111/pbi.13140     Reference: May 4th, 2019
Variation: September 1st, 2003
Gene Model: September 25th, 2015
6 months agokn1 knotted1: dominant Kn1 plants have localized proliferation of tissue at vascular bundles on leaf
1.10
   Strable, J; Vollbrecht, E. 2019. Development. 0:doi: 10.1242/dev.171181     Reference: May 1st, 2019
Variation: December 6th, 2013
6 months agoufo1 unstable factor for orange1: dominant Ufo1 plants have orange color in anthers, silks, and most other plant parts in presence of P1-wr or P1-rr; growth retarded
10.03
GRMZM2G053177
Wittmeyer, KT, et al. 2018. Plant Cell. 0:doi: 10.1105/tpc.18.00546     Reference: May 1st, 2019
Variation: December 19th, 2018
Gene Model: December 19th, 2018
6 months agomyb31 MYB31 transcription factor31: R2R3-MYB factor, regulates lignin genes
 
GRMZM2G050305
Li, M et al. 2019. Mol Biol Rep pp.doi: 10.1007/s11033-019-04840-5   LOC_Os09g36730 (MSU/TIGR) Reference: May 1st, 2019
Gene Product: February 16th, 2011
Variation: May 6th, 2011
Gene Model: November 30th, 2015
6 months agoubi1 ubiquitin1: genomic sequence, 7 contiguous direct ubiquitin repeats; transcript specific probe; promoter active in monocots, not in tobacco
 
GRMZM2G409726
Strable, J; Vollbrecht, E. 2019. Development. 0:doi: 10.1242/dev.171181     Reference: May 1st, 2019
Gene Product: September 1st, 2003
Variation: November 20th, 2014
Gene Model: November 18th, 2014
6 months agodof36 C2C2-Dof-transcription factor 36: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wu, JD et al. 2019. Frontiers Plant Sci 10:465     Reference: May 1st, 2019
Variation: October 7th, 2016
6 months agorbm48 RNA binding motif protein 48: Encodes a U12 splicing factor; mutants have a rough endosperm phenotype
 
GRMZM2G163247
Bai, F, et al. 2019. Plant Cell. 0:doi: 10.1105/tpc.18.00754     Reference: May 1st, 2019
Gene Product: March 7th, 2019
Variation: March 7th, 2019
Gene Model: February 15th, 2019
6 months agosi1 silky1: (aka ts8, ms-si) multiple silks in ear; sterile tassel with silks
6.01
   Strable, J; Vollbrecht, E. 2019. Development. 0:doi: 10.1242/dev.171181     Reference: May 1st, 2019
Variation: November 2nd, 2015
6 months agokrp11 kinesin-related protein11: Mutants exhibit a varied-kernel-size phenotype - segregated small seeds of varying sizes (Huang et al., 2019)
7.00
GRMZM2G436981
Huang, YC, et al. 2019. Plant Cell. 0:doi: 10.1105/tpc.18.00966     Reference: May 1st, 2019
Gene Product: November 10th, 2017
Variation: April 9th, 2019
Gene Model: July 30th, 2015
6 months agodrl2 drooping leaf2: mutant enhances the phenotype of ifa1 mutants (a.k.a. drl1)
9.06
GRMZM2G102218
Strable, J; Vollbrecht, E. 2019. Development. 0:doi: 10.1242/dev.171181   AT1G69180 (TAIR)
LOC_Os03g11600 (MSU/TIGR)
Reference: May 1st, 2019
Gene Product: October 16th, 2015
Variation: July 12th, 2017
Gene Model: October 16th, 2015
6 months agorgh3 rough endosperm3: Mature rgh3 seeds show a rough, etched, or pitted endosperm surface as well as a reduced seed size
 
GRMZM2G128228
Bai, F, et al. 2019. Plant Cell. 0:doi: 10.1105/tpc.18.00754     Reference: May 1st, 2019
Gene Product: December 29th, 2011
Variation: December 29th, 2011
Gene Model: April 29th, 2013
6 months agoyab15 yabby15:
5.05
   Strable, J; Vollbrecht, E. 2019. Development. 0:doi: 10.1242/dev.171181     Reference: May 1st, 2019
Gene Product: October 16th, 2015
Variation: December 30th, 2014
6 months agol15 luteus15: like l4; lethal yellow seedling; chloroplast mRNA processing.Chloroplast PPR protein. Activates atpH translation. Stabilizes atpH and psaJ RNA termini. Binds atpI-atpH and psaJ-rpl33 intergenic regions. (A. Barkan, 2015)
6.02 - 6.03
GRMZM2G177169
Rojas, M et al. 2019. Nature Plants pp.doi: 10.1038/s41477-019-0412-1   AT2G18940 (TAIR)
LOC_Os05g19380 (MSU/TIGR)
Os05g0275000 (Gramene)
Reference: April 29th, 2019
Gene Product: December 30th, 2015
Variation: November 7th, 2012
Gene Model: November 6th, 2012
6 months agoatpH (cp) ATPaseH:
 
   Rojas, M et al. 2019. Nature Plants pp.doi: 10.1038/s41477-019-0412-1     Reference: April 29th, 2019
Gene Product: October 21st, 2003
6 months agomatl1 matrilineal1: encodes a pollen-specific phospholipase; novel edits lead to a 6.7% haploid induction rate
 
GRMZM2G471240
Wang, S et al. 2019. Plant Methods 15:42     Reference: April 27th, 2019
Gene Product: March 14th, 2017
Variation: February 10th, 2017
Gene Model: January 25th, 2017
6 months agocenH3 centromeric histone H3:
6.06
GRMZM2G158526
Wang, S et al. 2019. Plant Methods 15:42     Reference: April 27th, 2019
Gene Product: December 24th, 2015
Variation: November 7th, 2012
Gene Model: October 24th, 2011
6 months agoms33 male sterile33:
2.09
GRMZM2G070304
Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y   LOC_Os11g45400 (MSU/TIGR) Reference: April 25th, 2019
Gene Product: March 25th, 2019
Variation: December 4th, 2018
Gene Model: March 17th, 2018
6 months agogpat1 glycerol-3-phosphate acyltransferase1:
3.06
GRMZM2G083195
Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y     Reference: April 25th, 2019
Gene Product: March 25th, 2019
Variation: March 23rd, 2015
Gene Model: March 24th, 2015
6 months agogpat15 glycerol-3-phosphate acyltransferase15:
 
GRMZM2G159890
Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y     Reference: April 25th, 2019
Gene Product: March 25th, 2019
Gene Model: March 25th, 2019
6 months agogpat7 glycerol-3-phosphate acyltransferase7:
 
GRMZM2G064590
Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y     Reference: April 25th, 2019
Gene Product: March 25th, 2019
Gene Model: March 25th, 2019
6 months agogpat2 glycerol-3-phosphate acyltransferase2:
 
GRMZM2G147917
Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y     Reference: April 25th, 2019
Gene Product: March 25th, 2019
Gene Model: March 25th, 2019
6 months agogpat3 glycerol-3-phosphate acyltransferase3:
 
GRMZM2G156729
Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y     Reference: April 25th, 2019
Gene Product: March 25th, 2019
Gene Model: March 25th, 2019
6 months agogpat5 glycerol-3-phosphate acyltransferase5:
 
GRMZM2G072298
Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y     Reference: April 25th, 2019
Gene Product: March 25th, 2019
Gene Model: March 25th, 2019
6 months agogpat8 glycerol-3-phosphate acyltransferase8:
 
GRMZM2G065203
Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y     Reference: April 25th, 2019
Gene Product: March 25th, 2019
Gene Model: March 25th, 2019
6 months agogpat9 glycerol-3-phosphate acyltransferase9:
 
GRMZM2G131378
Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y     Reference: April 25th, 2019
Gene Product: March 25th, 2019
Gene Model: March 25th, 2019
6 months agogpat10 glycerol-3-phosphate acyltransferase10:
 
GRMZM2G020320
Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y     Reference: April 25th, 2019
Gene Product: March 25th, 2019
Gene Model: March 25th, 2019
6 months agogpat11 glycerol-3-phosphate acyltransferase11:
 
GRMZM2G059637
Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y     Reference: April 25th, 2019
Gene Product: March 25th, 2019
Gene Model: March 25th, 2019
6 months agogpat12 glycerol-3-phosphate acyltransferase12:
 
GRMZM2G166176
Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y     Reference: April 25th, 2019
Gene Product: March 25th, 2019
Gene Model: March 25th, 2019
6 months agogpat13 glycerol-3-phosphate acyltransferase13:
 
GRMZM2G177150
Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y     Reference: April 25th, 2019
Gene Product: March 25th, 2019
Gene Model: March 25th, 2019
6 months agogpat14 glycerol-3-phosphate acyltransferase14:
 
GRMZM2G123987
Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y     Reference: April 25th, 2019
Gene Product: March 25th, 2019
Gene Model: March 25th, 2019
6 months agogpat16 glycerol-3-phosphate acyltransferase16:
 
GRMZM2G124042
Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y     Reference: April 25th, 2019
Gene Product: March 25th, 2019
Gene Model: April 25th, 2019
6 months agogpat17 glycerol-3-phosphate acyltransferase17:
 
   Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y     Reference: April 25th, 2019
Gene Product: March 25th, 2019
6 months agogpat18 glycerol-3-phosphate acyltransferase18:
 
   Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y     Reference: April 25th, 2019
Gene Product: March 25th, 2019
6 months agogpat19 glycerol-3-phosphate acyltransferase19:
 
GRMZM2G165681
Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y     Reference: April 25th, 2019
Gene Product: March 25th, 2019
Gene Model: April 25th, 2019
6 months agogpat20 glycerol-3-phosphate acyltransferase20:
 
GRMZM2G075295
Zhu, TT et al. 2019. Theor Appl Genet pp.doi: 10.1007/s00122-019-03343-y     Reference: April 25th, 2019
Gene Product: March 25th, 2019
Gene Model: April 25th, 2019
6 months agodxs3 deoxy xylulose synthase3:
 
GRMZM2G173641
Owens, BF et al. 2019. G3 pp.doi: 10.1534/g3.119.400040     Reference: April 24th, 2019
Gene Product: August 17th, 2004
Variation: February 15th, 2012
Gene Model: December 9th, 2011
6 months agodmes1 diphosphocytidyl methyl erythritol synthase1: encodes 4-Diphosphocytidyl-2C-methyl-D-erythritol synthase
6.01
GRMZM5G856881
Owens, BF et al. 2019. G3 pp.doi: 10.1534/g3.119.400040     Reference: April 24th, 2019
Gene Product: March 7th, 2014
Gene Model: October 4th, 2014
6 months agobz1 bronze1: modifies purple aleurone and plant color to pale or reddish brown; anthers yellow-fluorescent; allele bz1-m4 = sh1-bz1-m4; SSR phi017NCBI: UDPG-flavonoid 3-oxy glucosyl transferase
9.02
   Dooner, HK et al. 2019. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.1903809116     Reference: April 16th, 2019
Gene Product: July 4th, 2018
Variation: November 20th, 2018
6 months agoremo3 remorin3: mutants are more susceptible to to Southern corn rust
 
GRMZM2G122937
Wang, SX et al. 2019. Plant Biotechnol J pp.doi: 10.1111/pbi.13129     Reference: April 16th, 2019
Gene Product: September 24th, 2018
Variation: April 16th, 2019
Gene Model: April 16th, 2019
6 months agocle7 clavata3/esr-related7: mutants have fasciated ears
 
GRMZM2G372364
Rodriguez-Leal, D et al. 2019. Nature Genetics pp.DOI: 10.1038/s41588-019-0389-8     Reference: April 15th, 2019
Variation: April 15th, 2019
Gene Model: September 15th, 2016
6 months agobx1 benzoxazinless1: plastid localized, committed step in cyclic hydroxamates/DIMBOA synthesis; insect resistance in young seedlings; SSR umc1022
4.00
GRMZM2G085381
Kudjordjie, EN et al. 2019. Microbiome 7:59     Reference: April 12th, 2019
Gene Product: October 14th, 2011
Variation: April 12th, 2019
Gene Model: October 14th, 2011
6 months agobx2 benzoxazinone synthesis2: endoplasmic reticulum P450 monoxygenase; synthesis cyclic hyroxamates/DIMBOA; insect resistance in young seedlings; SSR umc1164, umc1682
4.01
GRMZM2G085661
Kudjordjie, EN et al. 2019. Microbiome 7:59     Reference: April 12th, 2019
Gene Product: April 8th, 2013
Variation: April 12th, 2019
Gene Model: October 24th, 2011
6 months agobx6 benzoxazinone synthesis6: cytosolic 2-oxoglutarate-dependent dioxygenase; synthesis of cyclohydroxamates/DIMBOA; insect resistance in young seedlings; SSR umc1232
4.01
   Kudjordjie, EN et al. 2019. Microbiome 7:59     Reference: April 12th, 2019
Gene Product: June 20th, 2016
Variation: April 12th, 2019
6 months agorlsb1 rbcl rna s1-binding domain protein1: Chloroplast RNA binding protein. (A. Barkan, 2015)encodes RLSB mRNA binding proteinplastid RNA-chaperone-like protein (Jiang et al., 2019)
 
GRMZM2G087628
Jiang, JJ et al. 2019. Plant Cell pp.doi: 10.1105/tpc.18.00946   AT1G71720 (TAIR) Reference: April 10th, 2019
Gene Product: July 1st, 2016
Variation: April 10th, 2019
Gene Model: October 19th, 2013
6 months agobm5 brown midrib5: bm5 encodes 4-coumarate-CoA ligase (Xiong et al., 2019)
5.04
GRMZM2G075333
Xiong, WD et al. 2019. Biotechnology for Biofuels. 12:82     Reference: April 10th, 2019
Gene Product: April 1st, 2017
Variation: April 10th, 2019
Gene Model: June 23rd, 2016
7 months agofl1 floury endosperm1: (was o4) endosperm opaque, soft; dosage effect with fl1-ref allele, but o4 allele is recessive
2.04
GRMZM2G094532
Vanous, A et al. 2019. Plant Genome 12:170114     Reference: April 6th, 2019
Gene Product: July 8th, 2013
Variation: September 16th, 2010
Gene Model: July 8th, 2013
7 months agoo10 opaque endosperm10: like o1
 
GRMZM2G346263
Vanous, A et al. 2019. Plant Genome 12:170114     Reference: April 6th, 2019
Gene Product: August 20th, 2016
Variation: August 20th, 2016
Gene Model: August 20th, 2016
7 months agoemp16 empty pericarp16: mutant homozyous kernels have empty pericarp and are non-viable.
 
GRMZM2G060516
Vanous, A et al. 2019. Plant Genome 12:170114     Reference: April 6th, 2019
Gene Product: December 27th, 2016
Variation: January 16th, 2016
Gene Model: January 16th, 2016
7 months agolhca1 light harvesting complex A1: leaf cDNA csu800 similar to photosystem I antenna protein
2.08
GRMZM2G038519
Septiani, P et al. 2019. Sci. Rep. 9:5665     Reference: April 5th, 2019
Gene Product: September 1st, 2003
Variation: February 18th, 2015
Gene Model: February 18th, 2015
7 months agoaco5 aconitase5:
2.07
   Septiani, P et al. 2019. Sci. Rep. 9:5665     Reference: April 5th, 2019
Gene Product: September 1st, 2003
Variation: April 5th, 2019
7 months agotua5 alpha tubulin5: alpha tubulin subfamily II with tua6; gene specific cDNA probe
2.08
   Septiani, P et al. 2019. Sci. Rep. 9:5665     Reference: April 5th, 2019
Gene Product: September 1st, 2003
Variation: August 16th, 2013
7 months agoaprl2 adenosine 5'-phosphosulfate reductase-like2:
2.07
GRMZM2G087254
Septiani, P et al. 2019. Sci. Rep. 9:5665     Reference: April 5th, 2019
Gene Product: October 10th, 2017
Variation: December 23rd, 2015
Gene Model: December 18th, 2015
7 months agoarid7 ARID-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Qian, YX et al. 2019. BMC Genomics 20:256     Reference: April 3rd, 2019
Gene Product: April 3rd, 2019
7 months agojmj1 JUMONJI-transcription factor 1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: April 3rd, 2019
7 months agojmj10 JUMONJI-transcription factor 10: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Qian, YX et al. 2019. BMC Genomics 20:256     Reference: April 3rd, 2019
Gene Product: April 3rd, 2019
7 months agojmj11 JUMONJI-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Qian, YX et al. 2019. BMC Genomics 20:256     Reference: April 3rd, 2019
Gene Product: April 3rd, 2019
7 months agojmj12 JUMONJI-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Qian, YX et al. 2019. BMC Genomics 20:256     Reference: April 3rd, 2019
Gene Product: April 3rd, 2019
7 months agojmj13 JUMONJI-transcription factor 13: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: April 3rd, 2019
7 months agojmj14 JUMONJI-transcription factor 14: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Qian, YX et al. 2019. BMC Genomics 20:256     Reference: April 3rd, 2019
Gene Product: April 3rd, 2019
7 months agojmj16 JUMONJI-transcription factor 16: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Qian, YX et al. 2019. BMC Genomics 20:256     Reference: April 3rd, 2019
Gene Product: April 3rd, 2019
7 months agojmj17 JUMONJI-transcription factor 17: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: April 3rd, 2019
7 months agojmj18 JUMONJI-transcription factor 18: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Qian, YX et al. 2019. BMC Genomics 20:256     Reference: April 3rd, 2019
Gene Product: April 3rd, 2019
7 months agojmj19 JUMONJI-transcription factor 19: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Qian, YX et al. 2019. BMC Genomics 20:256     Reference: April 3rd, 2019
Gene Product: April 3rd, 2019
7 months agojmj2 JUMONJI-transcription factor 2: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: April 3rd, 2019
7 months agojmj20 JUMONJI-transcription factor 20: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Qian, YX et al. 2019. BMC Genomics 20:256     Reference: April 3rd, 2019
Gene Product: April 3rd, 2019
7 months agojmj21 JUMONJI-transcription factor 21: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Qian, YX et al. 2019. BMC Genomics 20:256     Reference: April 3rd, 2019
Gene Product: April 3rd, 2019
7 months agojmj22 JUMONJI-transcription factor 22: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Qian, YX et al. 2019. BMC Genomics 20:256     Reference: April 3rd, 2019
Gene Product: April 3rd, 2019
7 months agojmj3 JUMONJI-transcription factor 3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: April 3rd, 2019
7 months agojmj4 JUMONJI-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to JUMONJI 14 protein of A. thaliana
 
   Qian, YX et al. 2019. BMC Genomics 20:256     Reference: April 3rd, 2019
Gene Product: April 3rd, 2019
7 months agojmj5 JUMONJI-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: April 3rd, 2019
7 months agojmj6 JUMONJI-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Qian, YX et al. 2019. BMC Genomics 20:256     Reference: April 3rd, 2019
Gene Product: April 3rd, 2019
7 months agojmj7 JUMONJI-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to transcription factor jumonji and C5HC2 type zinc finger domain-containing protein of A. thaliana
 
   Qian, YX et al. 2019. BMC Genomics 20:256     Reference: April 3rd, 2019
Gene Product: April 3rd, 2019
7 months agojmj8 JUMONJI-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Qian, YX et al. 2019. BMC Genomics 20:256     Reference: April 3rd, 2019
Gene Product: April 3rd, 2019
7 months agojmj9 JUMONJI-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Qian, YX et al. 2019. BMC Genomics 20:256     Reference: April 3rd, 2019
Gene Product: April 3rd, 2019
7 months agojmj15 JUMONJI-transcription factor 15: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
5.06
   Qian, YX et al. 2019. BMC Genomics 20:256     Reference: April 3rd, 2019
Gene Product: April 3rd, 2019
7 months agozag4 zea agamous4: genomic clone: distinct leaf and endosperm transcripts attributed to alternative splicing; contains zag1-like MADS box; SSR umc1183
3.03
GRMZM2G471089
Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: April 1st, 2019
7 months agocrs4 chloroplast RNA splicing4: pale yellow green seedling lethal; splicing of ndhA and ndhB transcprits (uncertain if in crs4 or crs4a)
 
GRMZM2G481231
Wei, KF; Han, P. 2016. Mol Breed 36:170     Reference: December 26th, 2016
Gene Product: September 15th, 2012
Variation: December 27th, 2016
Gene Model: March 30th, 2019
7 months agomab31 math-btb31:
 
GRMZM2G091251
Juranic, M et al. 2012. Plant Cell 24:4974-4991     Reference: February 14th, 2017
Gene Product: June 6th, 2014
Gene Model: March 30th, 2019
7 months agobzip1 bZIP transcription factor1:
3.08
GRMZM2G117851
Zhang, YM et al. 2019. J Agric Food Chem pp.doi: 10.1021/acs.jafc.9b00322     Reference: March 28th, 2019
Gene Model: September 30th, 2015
Recommended by Ed Coe:
January 8th, 2008
7 months agogl6 glossy6: like gl1, but seedling leaf surface bright green instead of bluish
3.05 - 3.05
GRMZM2G139786
Li, L et al. 2019. J Exp Bot pp.doi: 10.1093/jxb/erz131     Reference: March 28th, 2019
Gene Product: March 28th, 2019
Variation: July 28th, 2018
Gene Model: July 28th, 2018
7 months agolg2 liguleless2: like lg1, less extreme
3.06
   Zhang, YM et al. 2019. J Agric Food Chem pp.doi: 10.1021/acs.jafc.9b00322     Reference: March 28th, 2019
Gene Product: August 22nd, 2014
Variation: August 20th, 2014
7 months agogols3 galactinol synthase3: Expressed late in seed developmentExpressed during post-imbibition dehydration stress
9.04
GRMZM5G872256
Zhang, YM et al. 2019. J Agric Food Chem pp.doi: 10.1021/acs.jafc.9b00322     Reference: March 28th, 2019
Gene Product: March 1st, 2018
Variation: January 26th, 2010
Gene Model: December 24th, 2015
7 months agogpm46  : ubiquitous expression; putative adenylate translocase
9.03
GRMZM2G174738
Bahaji, A et al. 2019. Frontiers Plant Sci pp.doi: 10.3389/fpls.2019.00242     Reference: March 28th, 2019
Gene Product: February 24th, 2015
Gene Model: February 24th, 2015
7 months agopep1 phosphoenolpyruvate carboxylase1: cytosolic C4 isozyme; single copy, similar to C3-PEPCase genes; cDNA complements E. coli mutant; genomic and partial amino acid sequences compare; SSR phi065
9.03
   Gorska, A et al. 2019. Plant J pp.doi: 10.1111/tpj.14323     Reference: March 25th, 2019
Gene Product: September 1st, 2003
Variation: May 11th, 2018
7 months agoben1 bentazon resistance1: recessive susceptibility to nicosulfuron (Accent) and mesotrione herbicidesDominant Ben1 resistant, with Ben2
5.01
GRMZM2G090432
Liu, XM et al. 2019. Theor Appl Genet pp.doi:10.1007/s00122-019-03282-8     Reference: January 17th, 2019
Gene Product: March 25th, 2019
Variation: February 12th, 2010
Gene Model: July 27th, 2016
7 months agocyp22 cytochrome P-450 22:
 
GRMZM2G067591
Block, AK et al. 2018. Planta pp.doi: 10.1007/s00425-018-2999-2     Reference: September 7th, 2018
Gene Product: March 25th, 2019
Gene Model: February 26th, 2018
7 months agocyp23 cytochrome P-450 23:
 
GRMZM2G018612
Yoneyama, K et al. 2018. New Phytol pp.doi: 10.1111/nph.15055     Reference: February 27th, 2018
Gene Product: March 25th, 2019
Gene Model: February 27th, 2018
7 months agocyp24 cytochrome P-450 24:
 
GRMZM2G023952
Yoneyama, K et al. 2018. New Phytol pp.doi: 10.1111/nph.15055     Reference: February 27th, 2018
Gene Product: March 25th, 2019
Gene Model: February 27th, 2018
7 months agocyp26 cytochrome P-450 26:
 
GRMZM2G087875
Panozzo, A et al. 2019. Frontiers Plant Sci 10:62     Reference: February 20th, 2019
Gene Product: March 25th, 2019
Gene Model: November 30th, 2018
7 months agockx7 cytokinin oxidase7:
 
GRMZM2G114427
Gu, R et al. 2010. J Plant Growth Reg 29:428-440     Reference: March 28th, 2014
Gene Product: April 4th, 2014
Gene Model: March 23rd, 2019
7 months agocol9 C2C2-CO-like-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to zinc finger protein CONSTANS-LIKE 9 of A. thaliana
 
GRMZM2G042198
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
Gene Model: March 22nd, 2019
7 months agockx8 cytokinin oxidase8:
 
GRMZM2G114427
Gu, R et al. 2010. J Plant Growth Reg 29:428-440     Reference: March 28th, 2014
Gene Product: April 4th, 2014
Gene Model: March 22nd, 2019
7 months agoms20 male sterile20: mutants are male sterile and exhibit a glossy outer anther surface, abnormal Ubish bodies, and defective pollen exinedegeneration obvious by mid-vacuolated microspore stage
1.00 - 1.05
GRMZM2G434500
Wang, YB et al. 2019. Int J Mol Sci 20:1411   AT1G12570 (TAIR) Reference: March 20th, 2019
Gene Product: November 16th, 2016
Variation: March 20th, 2019
Gene Model: November 16th, 2016
7 months agotrps12 trehalose-6-phosphate synthase12: similar to alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 of A. thaliana
 
GRMZM2G133966
Zhou, ML et al. 2014. J Plant Growth Reg 33:256-271     Reference: June 26th, 2014
Gene Product: September 15th, 2013
Gene Model: March 19th, 2019
7 months agogl8b 3-ketoacyl reductase GL8B: encodes fatty acid elongase, paralogous to gl8, maps in syntenous region, expression distinct but similar, double mutant embryos are non-viable
4.05
GRMZM2G087323
Campbell, AA et al. 2019. PLoS One 14:e0213620     Reference: March 12th, 2019
Gene Product: March 6th, 2007
Variation: December 6th, 2012
Gene Model: February 20th, 2015
Recommended by Marty Sachs:
March 7th, 2007
7 months agogl8 glossy8: (was gl10) like gl1; cuticle wax in rice-grain-type particles; cDNA probesimilar to Arabidopsis beta-ketoacyl reductase 1
5.05
   Campbell, AA et al. 2019. PLoS One 14:e0213620     Reference: March 12th, 2019
Gene Product: September 1st, 2003
Variation: June 14th, 2012
7 months agogl26 glossy26: like gl1similar to Arabidopsis enoyl reductase
8.02
GRMZM2G481843
Campbell, AA et al. 2019. PLoS One 14:e0213620     Reference: March 12th, 2019
Gene Product: October 31st, 2018
Variation: October 31st, 2018
Gene Model: September 17th, 2018
7 months agoggt1 geranylgeranyl transferase1: when expressed in maize callus, it as more resistant to maize insect pests and ear rot fungi
 
GRMZM2G151087
Campbell, AA et al. 2019. PLoS One 14:e0213620     Reference: March 12th, 2019
Gene Product: January 9th, 2018
Gene Model: January 8th, 2018
7 months agoelo1 elongation defective-like1:
 
GRMZM2G037152
Campbell, AA et al. 2019. PLoS One 14:e0213620     Reference: March 12th, 2019
Gene Product: November 1st, 2018
Gene Model: March 12th, 2019
7 months agokcs1 3-ketoacyl-CoA synthase1:
8.03
GRMZM2G393897
Campbell, AA et al. 2019. PLoS One 14:e0213620     Reference: March 12th, 2019
Gene Product: November 1st, 2018
Gene Model: March 12th, 2019
8 months agoaasr1 abscisic acid stress ripening1: protects the major ARS protein in maize; protects kernel yield under water deficit; SSR pio059, IDP9044
10.02
GRMZM2G136910
Yao, CT et al. 2019. J Plant Growth Reg pp.doi: 10.1007/s00344-019-09934-9     Reference: March 8th, 2019
Gene Product: January 2nd, 2019
Variation: December 30th, 2011
Gene Model: November 1st, 2011
8 months agotpj1 translation of psbJ1: encodes a chloroplast-localized PPR protein that is required for the translation of the chloroplast psbJ ORF
 
GRMZM2G056116
Williams-Carrier, R et al. 2019. Plant J pp.doi: 10.1111/tpj.14308   AT3G46610 (TAIR) Reference: March 8th, 2019
Gene Product: December 27th, 2016
Variation: March 8th, 2019
Gene Model: March 14th, 2018
8 months agotpl1 topless-related1:
 
GRMZM2G316967
Liu, X; Galli, M; Camehl, I; Gallavotti, A. 2018. Plant Physiol. 0:doi: 10.1104/pp.18.00913     Reference: March 5th, 2019
Gene Product: October 23rd, 2018
Gene Model: December 12th, 2016
8 months agotpl2 topless-related2:
 
GRMZM2G030422
Liu, X; Galli, M; Camehl, I; Gallavotti, A. 2018. Plant Physiol. 0:doi: 10.1104/pp.18.00913     Reference: March 5th, 2019
Gene Product: October 23rd, 2018
Gene Model: December 12th, 2016
8 months agorelk3 rel2-like3:
9.06
GRMZM2G550865
Liu, X; Galli, M; Camehl, I; Gallavotti, A. 2018. Plant Physiol. 0:doi: 10.1104/pp.18.00913     Reference: March 5th, 2019
Gene Product: October 23rd, 2018
Gene Model: October 23rd, 2018
8 months agoatg12 autophagy12: Mutants are phenotypically normal and fertile when grown under nutrient-rich conditions. However, when nitrogen-starved, seedling growth is severely arrested, and as the plants mature, they show enhanced leaf senescence and stunted ear development.
 
GRMZM5G842517
McLoughlin, F, et al. 2018. Nature Plants. 0:doi: 10.1038/s41477-018-0299-2     Reference: March 4th, 2019
Variation: August 15th, 2017
Gene Model: August 15th, 2017
8 months agowgs1 white green sectors1: white seedling with green sectors
5.07 - 5.08
   Neuffer, MG and England, DJ. 1995. MNL 69:43-46     Reference: September 1st, 2003
Variation: March 1st, 2019
8 months agozag2 Zea AGAMOUS homolog2: amino acid sequence, deduced from cDNA sequence, has 49% identity to Arabidopsis, floral homeotic gene product; expression restricted to female inflorescence; near ts4
3.05 - 3.05
   Dong, Q et al. 2019. Sci. Rep. 9:3253     Reference: March 1st, 2019
Gene Product: April 1st, 2011
Variation: October 22nd, 2014
8 months agocah6 carbonic anhydrase6: predicted beta carbonic anhydrase
8.06
GRMZM2G094165
Kolbe, AR et al. 2019. BMC Genomics 20:138     Reference: February 26th, 2019
Gene Product: February 26th, 2019
Gene Model: July 31st, 2014
8 months agocah2 carbonic anhydrase2: with cah1 promotes leaf CO2 availability for photosynthesis (Studer et al 2014)
 
GRMZM2G348512
Kolbe, AR et al. 2019. BMC Genomics 20:138     Reference: February 26th, 2019
Gene Product: February 26th, 2019
Variation: May 25th, 2018
Gene Model: July 31st, 2014
8 months agocah3 carbonic anhydrase3:
 
GRMZM2G348512
Kolbe, AR et al. 2019. BMC Genomics 20:138     Reference: February 26th, 2019
Gene Product: February 26th, 2019
Gene Model: August 5th, 2014
8 months agocah1 carbonic anhydrase1: C4 carbonic anhydrase; higher transcripts in mesophyll cells (Tausta 2014); double mutants with cah2 virutally remove this activity from leaf (Studer et al 2014).
 
GRMZM2G121878
Kolbe, AR et al. 2019. BMC Genomics 20:138     Reference: February 26th, 2019
Gene Product: February 26th, 2019
Variation: May 25th, 2018
Gene Model: July 31st, 2014
8 months agocah4 carbonic anhydrase4: putative mitochondrial carbonic anhydrase (Studer et al 2014)
 
GRMZM2G414528
Kolbe, AR et al. 2019. BMC Genomics 20:138     Reference: February 26th, 2019
Gene Product: February 26th, 2019
Gene Model: July 31st, 2014
8 months agocah5 carbonic anhydrase5: predicted mitochondrial carbonic anhydrase
 
GRMZM2G145101
Kolbe, AR et al. 2019. BMC Genomics 20:138     Reference: February 26th, 2019
Gene Product: February 26th, 2019
Gene Model: July 31st, 2014
8 months agodef4 defensin-like protein4:
 
GRMZM2G153488
Vi, TXT et al. 2019. Mol Biol Rep pp.doi: 10.1007/s11033-019-04670-5     Reference: February 25th, 2019
Gene Product: July 25th, 2018
Gene Model: September 16th, 2017
8 months agoIDP137  :
3.07
GRMZM2G176912
    Variation: March 31st, 2005
Gene Model: February 25th, 2019
8 months agoIDP1480  : simiar to DEAD-box ATP-dependent RNA helicase 14 of A. thaliana
3.09
GRMZM2G078826
    Variation: March 31st, 2005
Gene Model: February 25th, 2019
8 months agoIDP149  : similar to proteasome subunit alpha type-3 A. thaliana
3.06
GRMZM2G445100
    Variation: March 31st, 2005
Gene Model: February 25th, 2019
8 months agoIDP158  :
3.09
GRMZM2G175076
    Variation: March 31st, 2005
Gene Model: February 25th, 2019
8 months agoIDP1617  : similar to 3-hydroxyisobutyrate dehydrogenase of A. thaliana
3.07
GRMZM5G818186
    Variation: March 31st, 2005
Gene Model: February 25th, 2019
8 months agoIDP2348  : similar to pinoid-binding protein 1 of A. thaliana
3.06
GRMZM2G062283
    Variation: March 31st, 2005
Gene Model: February 25th, 2019
8 months agoIDP2368  :
3.07
GRMZM2G042548
    Variation: March 31st, 2005
Gene Model: February 25th, 2019
8 months agoIDP253  :
3.09
GRMZM2G094428
    Variation: March 31st, 2005
Gene Model: February 25th, 2019
8 months agoIDP264  :
3.06
GRMZM2G096920
    Variation: March 31st, 2005
Gene Model: February 25th, 2019
8 months agoIDP284  :
3.09
GRMZM2G463032
    Variation: March 31st, 2005
Gene Model: February 25th, 2019
8 months agoIDP366  :
3.07
GRMZM2G042099
    Variation: March 31st, 2005
Gene Model: February 25th, 2019
8 months agoIDP427  :
3.09
GRMZM2G034943
    Variation: March 31st, 2005
Gene Model: February 25th, 2019
8 months agoIDP494  :
3.09
GRMZM2G049866
    Variation: March 31st, 2005
Gene Model: February 25th, 2019
8 months agoIDP518  :
3.09
GRMZM2G120619
    Variation: March 31st, 2005
Gene Model: February 25th, 2019
8 months agoIDP546  : similar to glyoxalase II 3 of A. thaliana
3.08
GRMZM5G816356
    Variation: March 31st, 2005
Gene Model: February 25th, 2019
8 months agoIDP624  :
3.09
GRMZM2G019386
    Variation: March 31st, 2005
Gene Model: February 25th, 2019
8 months agoIDP748  :
3.08
GRMZM2G092152
    Variation: March 31st, 2005
Gene Model: February 25th, 2019
8 months agoIDP783  : similar to lavodoxin-like protein of A. thaliana
3.07
GRMZM2G069865
    Variation: March 31st, 2005
Gene Model: February 25th, 2019
8 months agoIDP798  :
3.09
GRMZM2G036050
    Variation: March 31st, 2005
Gene Model: February 25th, 2019
8 months agopco139502b  :
3.08
GRMZM2G152686
Basse, C. 2005. Plant Physiol. 138:1774-1784     Reference: November 23rd, 2011
Gene Product: April 8th, 2011
Variation: April 17th, 2008
Gene Model: February 25th, 2019
8 months agoumc2269  :
3.06
GRMZM2G145753
    Variation: February 24th, 2019
Gene Model: April 3rd, 2018
8 months agoIDP138  :
3.05
GRMZM2G439884
    Variation: March 31st, 2005
Gene Model: February 24th, 2019
8 months agoIDP1433  :
3.05
GRMZM2G155096
    Variation: March 31st, 2005
Gene Model: February 24th, 2019
8 months agoIDP1696  : similar to vacuolar protein sorting 55 domain-containing protein of A. thaliana
3.05
GRMZM2G174221
    Variation: March 31st, 2005
Gene Model: February 24th, 2019
8 months agoIDP1698  :
3.05
GRMZM2G099496
    Variation: March 31st, 2005
Gene Model: February 24th, 2019
8 months agoIDP227  :
3.05
AC209377.3_FG003
    Variation: March 31st, 2005
Gene Model: February 24th, 2019
8 months agoIDP351  :
3.09
GRMZM2G057853
    Variation: March 31st, 2005
Gene Model: February 24th, 2019
8 months agoIDP49  :
3.05
GRMZM2G136262
    Variation: March 31st, 2005
Gene Model: February 24th, 2019
8 months agoIDP583  :
3.08
GRMZM2G178244
    Variation: March 31st, 2005
Gene Model: February 24th, 2019
8 months agoIDP667  :
3.05
GRMZM2G006277
    Variation: March 31st, 2005
Gene Model: February 24th, 2019
8 months agoIDP692  :
3.05
GRMZM2G349187
    Variation: March 31st, 2005
Gene Model: February 24th, 2019
8 months agoIDP73  : similar to beta-galactosidase 10 of A. thaliana
3.06
GRMZM2G038281
    Variation: March 31st, 2005
Gene Model: February 24th, 2019
8 months agoIDP813  : similar to 50S ribosomal protein L13 of A. thaliana
3.07
GRMZM2G043212
    Variation: March 31st, 2005
Gene Model: February 24th, 2019
8 months agomkk3 MAP kinase kinase3: stress response; induced by abscisic acid
 
GRMZM2G004468
Zhang, M; et al. 2012. J Plant Physiol. 169:1501-10     Reference: July 10th, 2013
Gene Product: July 10th, 2013
Gene Model: February 23rd, 2019
8 months agosweet17a sugars will eventually be exported transporter17a:
 
GRMZM2G106462
Sosso, D et al. 2015. Nature Genetics 47:1489-1493     Reference: February 17th, 2017
Gene Product: November 4th, 2015
Variation: February 23rd, 2019
Gene Model: November 3rd, 2015
8 months agoIDP125  : similar to Optic atrophy 3 protein (OPA3) of A. thaliana
3.00
GRMZM2G047509
    Variation: March 31st, 2005
Gene Model: February 23rd, 2019
8 months agoIDP1475  :
3.04
GRMZM2G326465
    Variation: March 31st, 2005
Gene Model: February 23rd, 2019
8 months agoIDP1634  :
3.04
GRMZM2G119778
    Variation: March 31st, 2005
Gene Model: February 23rd, 2019
8 months agoIDP2429  :
3.00
GRMZM2G093104
    Variation: March 31st, 2005
Gene Model: February 23rd, 2019
8 months agoIDP2443  : similar to syntaxin-22 of A. thaliana
3.04
GRMZM2G120115
    Variation: March 31st, 2005
Gene Model: February 23rd, 2019
8 months agoIDP319  :
3.04
GRMZM2G135322
    Variation: March 31st, 2005
Gene Model: February 23rd, 2019
8 months agoIDP370  :
3.04
GRMZM2G108847
    Variation: March 31st, 2005
Gene Model: February 23rd, 2019
8 months agoIDP428  :
3.04
GRMZM2G033626
    Variation: March 31st, 2005
Gene Model: February 23rd, 2019
8 months agoIDP491  :
3.04
GRMZM2G034896
    Variation: March 31st, 2005
Gene Model: February 23rd, 2019
8 months agoIDP506  :
3.05
GRMZM2G301172
    Variation: March 31st, 2005
Gene Model: February 23rd, 2019
8 months agoIDP664  : similar to Enolase-phosphatase E1 of A. thaliana
3.04
GRMZM2G111164
    Variation: March 31st, 2005
Gene Model: February 23rd, 2019
8 months agoIDP703  :
3.01
GRMZM2G153181
    Variation: March 31st, 2005
Gene Model: February 23rd, 2019
8 months agoIDP876  :
3.04
GRMZM2G035305
    Variation: March 31st, 2005
Gene Model: February 23rd, 2019
8 months agoIDP94  :
3.04
GRMZM2G083111
    Variation: March 31st, 2005
Gene Model: February 23rd, 2019
8 months agoadh1 alcohol dehydrogenase1: electrophoretic mobility; null alleles are known; dimeric; intra/interlocus hybrid bands occur); SSR umc1726
1.10
   Panozzo, A et al. 2019. Frontiers Plant Sci 10:62     Reference: February 20th, 2019
Gene Product: July 8th, 2009
Variation: March 22nd, 2006
8 months agoumc1049  :
2.08
GRMZM2G144180
    Variation: February 20th, 2019
Gene Model: February 15th, 2018
8 months agopdc3 pyruvate decarboxylase3: cDNA sequence, gene-specific probe
1.03
   Panozzo, A et al. 2019. Frontiers Plant Sci 10:62     Reference: February 20th, 2019
Gene Product: September 1st, 2003
Variation: September 1st, 2003
8 months agoaox2 alternative oxidase2: primers give PCR product closely similar to alternative oxidase in other species
 
GRMZM2G125669
Panozzo, A et al. 2019. Frontiers Plant Sci 10:62     Reference: February 20th, 2019
Gene Product: February 22nd, 2012
Variation: March 1st, 2012
Gene Model: February 17th, 2012
8 months agoalt10 alanine aminotransferase10: putative alanine aminotransferase weakly expressed in seedling leaf (Tausta et al 2014)
 
GRMZM2G124963
Tausta, SL et al. 2014. J Exp Bot 65:3543-3555     Reference: November 20th, 2014
Gene Product: August 22nd, 2014
Variation: February 20th, 2019
Gene Model: August 1st, 2014
8 months agoIDP114  :
2.09
GRMZM2G134559
    Variation: March 31st, 2005
Gene Model: February 20th, 2019
8 months agoIDP117  : similar to SNARE-like protein of A. thaliana
2.08
GRMZM2G097568
    Variation: March 31st, 2005
Gene Model: February 20th, 2019
8 months agoIDP1450  :
2.08
GRMZM5G837251
    Variation: March 31st, 2005
Gene Model: February 20th, 2019
8 months agogbptf6 GeBP-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.08
GRMZM2G075122
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: March 31st, 2005
Gene Model: February 20th, 2019
8 months agoIDP1674  :
2.08
GRMZM2G327635
    Variation: March 31st, 2005
Gene Model: February 20th, 2019
8 months agoIDP171  :
2.09
GRMZM2G444533
    Variation: March 31st, 2005
Gene Model: February 20th, 2019
8 months agoIDP176  :
2.08
GRMZM2G010551
    Variation: March 31st, 2005
Gene Model: February 20th, 2019
8 months agomagi86137  :
2.09
GRMZM2G169095
    Variation: March 31st, 2005
Gene Model: February 20th, 2019
8 months agoIDP1944  :
2.09
GRMZM2G340130
    Variation: March 31st, 2005
Gene Model: February 20th, 2019
8 months agoIDP2141  :
2.06
GRMZM2G078959
    Variation: March 31st, 2005
Gene Model: February 20th, 2019
8 months agoIDP2589  :
2.07
GRMZM2G102878
    Variation: March 31st, 2005
Gene Model: February 20th, 2019
8 months agoIDP456  :
2.07
GRMZM2G409722
    Variation: March 31st, 2005
Gene Model: February 20th, 2019
8 months agoIDP469  :
2.08
GRMZM2G010991
    Variation: March 31st, 2005
Gene Model: February 20th, 2019
8 months agoIDP502  :
2.07
GRMZM2G087662
    Variation: March 31st, 2005
Gene Model: February 20th, 2019
8 months agoIDP504  :
2.07
GRMZM2G031837
    Variation: March 31st, 2005
Gene Model: February 20th, 2019
8 months agoIDP610  :
2.09
GRMZM2G152258
    Variation: March 31st, 2005
Gene Model: February 20th, 2019
8 months agoIDP616  :
2.07
GRMZM2G081676
    Variation: March 31st, 2005
Gene Model: February 20th, 2019
8 months agoIDP661  :
2.09
GRMZM2G111172
    Variation: March 31st, 2005
Gene Model: February 20th, 2019
8 months agoIDP785  : similar to rhomboid protein-like protein of A. thaliana
2.08
GRMZM2G172138
    Variation: March 31st, 2005
Gene Model: February 20th, 2019
8 months agoIDP79  :
2.07
GRMZM2G080466
    Variation: March 31st, 2005
Gene Model: February 20th, 2019
8 months agoIDP866  :
2.06
GRMZM2G176977
    Variation: March 31st, 2005
Gene Model: February 20th, 2019
8 months agoras11A1 ras related protein11A1:
 
GRMZM2G029486
    Variation: January 21st, 2011
Gene Model: February 19th, 2019
8 months agoIDP1439  :
2.04
GRMZM2G083888
    Variation: March 31st, 2005
Gene Model: February 19th, 2019
8 months agoIDP147  : similar to small nuclear ribonucleoprotein D2 of A. thaliana
2.04
GRMZM2G171372
    Variation: March 31st, 2005
Gene Model: February 19th, 2019
8 months agoIDP1496  :
2.04
GRMZM2G391511
    Variation: March 31st, 2005
Gene Model: February 19th, 2019
8 months agoIDP183  :
2.05
GRMZM2G152089
    Variation: March 31st, 2005
Gene Model: February 19th, 2019
8 months agoIDP1954  :
2.03
GRMZM2G114276
    Variation: March 31st, 2005
Gene Model: February 19th, 2019
8 months agoIDP1971  :
2.02
GRMZM2G162230
    Variation: March 31st, 2005
Gene Model: February 19th, 2019
8 months agoIDP2407  :
2.04
GRMZM2G022255
    Variation: March 31st, 2005
Gene Model: February 19th, 2019
8 months agoIDP2449  :
2.04
GRMZM2G065073
    Variation: March 31st, 2005
Gene Model: February 19th, 2019
8 months agoIDP2455  : similar to bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like protein of A. thaliana
2.04
GRMZM2G136364
    Variation: March 31st, 2005
Gene Model: February 19th, 2019
8 months agorpl12 ribosomal protein L12: endosperm cDNA 5C05D11 similar to mammalian and yeast ribosomal protein
2.04
AC196489.3_FG002
Helentjaris, T. 1994. Nucleotide sequence submission to dbEST/GenBank     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: March 31st, 2005
Gene Model: February 19th, 2019
8 months agoIDP267  : similar to elongator complex protein 1 of A. thaliana
2.04
GRMZM2G018223
    Variation: March 31st, 2005
Gene Model: February 19th, 2019
8 months agoIDP445  :
2.02
GRMZM2G463280
    Variation: March 31st, 2005
Gene Model: February 19th, 2019
8 months agoIDP496  :
2.04
GRMZM2G022347
    Variation: March 31st, 2005
Gene Model: February 19th, 2019
8 months agoIDP592  :
2.05
GRMZM2G319454
    Variation: March 31st, 2005
Gene Model: February 19th, 2019
8 months agoIDP712  : similar to copper chaperone for SOD1 to A. thaliana
2.03
GRMZM2G175728
    Variation: March 31st, 2005
Gene Model: February 19th, 2019
8 months agoIDP723  :
2.05
GRMZM2G008864
    Variation: March 31st, 2005
Gene Model: February 19th, 2019
8 months agoIDP750  :
2.05
GRMZM2G116812
    Variation: March 31st, 2005
Gene Model: February 19th, 2019
8 months agorth2 roothair defective2: root hairs elongate 1/5-1/4 of normal; plants are vigorous and show little nutritional deficiency
5.04 - 5.09
   Klamer, F et al. 2019. Ann Bot pp.doi: 10.1093/aob/mcz011     Reference: February 18th, 2019
Variation: September 1st, 2003
8 months agoIDP232  :
2.02
GRMZM5G876898
    Variation: March 31st, 2005
Gene Model: February 18th, 2019
8 months agoIDP2388  :
2.02
GRMZM2G007914
    Variation: March 31st, 2005
Gene Model: February 18th, 2019
8 months agoIDP53  :
2.01
GRMZM2G407347
    Gene Product: March 25th, 2010
Gene Model: February 18th, 2019
8 months agoIDP776  :
2.01
GRMZM2G065012
    Variation: March 31st, 2005
Gene Model: February 18th, 2019
8 months agorad51b recombination protein51 gene b: one of two loci producing cDNA homologous to yeast protein required with Dmc1 protein for meiotic homologous recombination
3.05
GRMZM2G084762
Liu, F et al. 2019. Int J Mol Sci 20:807     Reference: February 18th, 2019
Gene Product: August 12th, 2016
Variation: May 13th, 2012
Gene Model: June 19th, 2014
8 months agorad51a recombination protein51 gene a: one of two loci producing cDNA homologous to yeast protein required with Dmc1 protein for meiotic homologous recombination
7.04
GRMZM2G121543
Liu, F et al. 2019. Int J Mol Sci 20:807     Reference: February 18th, 2019
Gene Product: August 12th, 2016
Variation: April 19th, 2012
Gene Model: June 19th, 2014
8 months agozim32 ZIM-transcription factor 32: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: February 17th, 2019
8 months agoIDP1478  :
1.11
GRMZM2G001661
    Variation: March 31st, 2005
Gene Model: February 16th, 2019
8 months agoIDP1633  :
1.11
GRMZM2G004459
    Variation: March 31st, 2005
Gene Model: February 16th, 2019
8 months agomagi24643  :
1.10
GRMZM2G120596
    Variation: March 31st, 2005
Gene Model: February 16th, 2019
8 months agoIDP2395  :
1.10
GRMZM2G031870
    Variation: March 31st, 2005
Gene Model: February 16th, 2019
8 months agoIDP2400  :
1.12
GRMZM2G021642
    Variation: March 31st, 2005
Gene Model: February 16th, 2019
8 months agoIDP340  :
1.09
GRMZM2G042040
    Variation: March 31st, 2005
Gene Model: February 16th, 2019
8 months agoIDP538  :
1.11
GRMZM2G062289
    Variation: March 31st, 2005
Gene Model: February 16th, 2019
8 months agoIDP603  :
1.11
GRMZM2G024267
    Variation: March 31st, 2005
Gene Model: February 16th, 2019
8 months agomagi62468  :
1.12
GRMZM2G023242
    Variation: March 31st, 2005
Gene Model: February 16th, 2019
8 months agoIDP72  :
1.11
GRMZM5G878153
    Variation: March 31st, 2005
Gene Model: February 16th, 2019
8 months agoIDP738  :
1.10
GRMZM2G443453
    Variation: March 31st, 2005
Gene Model: February 16th, 2019
8 months agoIDP772  :
1.11
GRMZM2G477609
    Variation: March 31st, 2005
Gene Model: February 16th, 2019
8 months agomagi7806  :
1.10
GRMZM2G165619
    Variation: March 31st, 2005
Gene Model: February 16th, 2019
8 months agoplt5 phospholipid transfer protein homolog5:
 
GRMZM2G005991
Wei, KF; Zhong, XJ. 2014. BMC Plant Biology 4:281     Reference: January 6th, 2017
Gene Product: September 1st, 2003
Variation: February 15th, 2019
Gene Model: January 6th, 2017
8 months agoIDP2450  : similar to P-loop containing nucleoside triphosphate hydrolase-like protein of A. thaliana
1.10
GRMZM5G837018
    Variation: March 31st, 2005
Gene Model: February 15th, 2019
8 months agoIDP352  :
1.08
GRMZM2G015005
    Variation: March 31st, 2005
Gene Model: February 15th, 2019
8 months agoIDP437  :
1.09
GRMZM2G038217
    Variation: May 12th, 2006
Gene Model: February 15th, 2019
8 months agoIDP630  :
1.08
GRMZM2G092391
    Variation: February 15th, 2007
Gene Model: February 15th, 2019
8 months agorgh*-N802 roughN802: speckled kernel; floury pitted etched rough surface
3.05 - 3.09
   Neuffer, MG and England, DJ. 1995. MNL 69:43-46     Reference: September 1st, 2003
Variation: February 14th, 2019
8 months agoagal1 alpha-galactosidase1: Entrez Gene relates to alpha-galactosidase 1 (AGAL) of Arabidopsis
1.07
GRMZM2G095126
Beaumont, VH et al. 1996. Theor Appl Genet 93:606-612     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: February 14th, 2019
Gene Model: April 19th, 2016
8 months agoIDP1437a  : similar to protein PIR of A. thaliana (1S site)similar to small subunit ribosomal protein S19 of A. thaliana (1L site)
1.01
GRMZM2G103599
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
8 months agoIDP1468  : similar to RNA polymerase Rpb6 of A. thaliana
1.08
GRMZM2G013600
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
8 months agoIDP156  :
1.06
GRMZM2G056056
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
8 months agoIDP174  :
1.07
GRMZM5G842970
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
8 months agoIDP190  :
1.08
GRMZM2G144782
    Variation: May 12th, 2006
Gene Model: February 14th, 2019
8 months agomagi32402  :
1.07
GRMZM2G057608
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
8 months agoIDP1982  :
1.07
GRMZM5G832380
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
8 months agoIDP243  :
1.07
GRMZM2G152552
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
8 months agoIDP2492  :
1.07
GRMZM2G135866
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
8 months agoIDP295  : similar to chitin elicitor receptor kinase 1 of A. thaliana
1.06
GRMZM2G317770
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
8 months agoIDP512  :
1.08
GRMZM2G124434
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
8 months agoIDP640  : similar to methionine aminopeptidase 1A of A. thaliana
1.07
GRMZM2G113062
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
8 months agoIDP641  : similar to UDP-glucosyl transferase 85A2 of A. thaliana
1.07
GRMZM2G373124
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
8 months agoIDP644  :
1.07
GRMZM2G025855
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
8 months agoIDP669  :
1.08
GRMZM2G064605
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
8 months agoIDP707  :
1.08
GRMZM2G164018
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
8 months agoIDP716  : similar to thioredoxin family protein of A. thaliana
1.07
GRMZM5G804772
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
8 months agoIDP790  :
1.06
GRMZM2G068657
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
8 months agoIDP820  :
1.07
GRMZM2G153208
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
8 months agoIDP856  :
1.07
AC217910.3_FG004
    Variation: March 31st, 2005
Gene Model: February 14th, 2019
8 months agosro2 similar to RCD one2:
 
GRMZM5G866843
Jiang, HH et al. 2018. Acta Physiol Plant 40:176     Reference: September 7th, 2018
Gene Product: September 7th, 2018
Variation: February 13th, 2019
Gene Model: August 10th, 2018
8 months agoIDP1407  :
1.05
GRMZM2G114356
    Variation: March 31st, 2005
Gene Model: February 13th, 2019
8 months agomagi23951  :
1.04
GRMZM2G330650
    Variation: September 25th, 2007
Gene Model: February 13th, 2019
8 months agoIDP1473  :
1.04
GRMZM2G074138
    Variation: March 31st, 2005
Gene Model: February 13th, 2019
8 months agoIDP1675  :
1.05
GRMZM2G424181
    Variation: March 31st, 2005
Gene Model: February 13th, 2019
8 months agoIDP182  :
1.04
GRMZM2G115975
    Variation: March 31st, 2005
Gene Model: February 13th, 2019
8 months agoIDP194  :
1.05
GRMZM2G034372
    Variation: March 31st, 2005
Gene Model: February 13th, 2019
8 months agoIDP1953  :
1.04
GRMZM2G074946
    Variation: March 31st, 2005
Gene Model: February 13th, 2019
8 months agoIDP1986  :
1.04
GRMZM2G028302
    Variation: March 31st, 2005
Gene Model: February 13th, 2019
8 months agoIDP2367  :
1.05
GRMZM5G868757
    Variation: March 31st, 2005
Gene Model: February 13th, 2019
8 months agoIDP2553  :
1.04
GRMZM2G107473
    Variation: March 31st, 2005
Gene Model: February 13th, 2019
8 months agoIDP34  :
1.05
GRMZM2G167728
    Variation: March 31st, 2005
Gene Model: February 13th, 2019
8 months agoIDP511  :
1.04
GRMZM5G862467
    Variation: March 31st, 2005
Gene Model: February 13th, 2019
8 months agoIDP739  :
1.04
GRMZM2G009232
    Variation: March 31st, 2005
Gene Model: February 13th, 2019
8 months agoIDP741  : similar to Lactoylglutathione lyase / glyoxalase I family protein of A. thaliana
1.06
GRMZM2G067028
    Variation: March 31st, 2005
Gene Model: February 13th, 2019
8 months agoIDP751  :
1.05
GRMZM2G033478
    Variation: March 31st, 2005
Gene Model: February 13th, 2019
8 months agoIDP752  : similar to putative protein phosphatase 2C 6 of A. thaliana
1.06
GRMZM2G170299
    Variation: March 31st, 2005
Gene Model: February 13th, 2019
8 months agoIDP839  :
1.04
GRMZM2G039880
    Variation: March 31st, 2005
Gene Model: February 13th, 2019
8 months agoIDP875  :
1.03
GRMZM5G851485
    Variation: March 31st, 2005
Gene Model: February 13th, 2019
8 months agomagi107220  :
1.04
GRMZM2G172244
    Variation: March 31st, 2005
Gene Model: February 13th, 2019
8 months agopdi9 protein disulfide isomerase9:
1.03
GRMZM2G073628
Jia, SG et al. 2019. pp.doi: 10.1016/j.gpb.2018.02.003     Reference: February 12th, 2019
Gene Product: September 1st, 2003
Variation: December 23rd, 2015
Gene Model: December 18th, 2015
8 months agoAY106592  : similar to protein sodium-and lithium-tolerant 1 of A. thaliana
1.03
GRMZM2G048482
    Variation: February 12th, 2019
Gene Model: February 12th, 2019
8 months agoAY110240  :
1.03
GRMZM2G013957
    Variation: July 29th, 2004
Gene Model: February 12th, 2019
8 months agoIDP112  :
1.03
GRMZM2G319781
    Variation: March 31st, 2005
Gene Model: February 12th, 2019
8 months agolimtf1 LIM-transcription factor 1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.03
GRMZM2G128206
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: March 31st, 2005
Gene Model: February 12th, 2019
8 months agoIDP180  :
1.03
GRMZM2G341309
    Variation: March 31st, 2005
Gene Model: February 12th, 2019
8 months agoIDP329  :
1.03
GRMZM2G049190
    Variation: March 31st, 2005
Gene Model: February 12th, 2019
8 months agoIDP643  : similar to gamma-interferon-inducible lysosomal thiol reductase family protein of A. thaliana
1.03
GRMZM2G307992
    Variation: March 31st, 2005
Gene Model: February 12th, 2019
8 months agoIDP701  :
1.03
GRMZM2G048703
    Variation: March 31st, 2005
Gene Model: February 12th, 2019
8 months agoIDP92  :
1.03
GRMZM2G049041
    Variation: March 31st, 2005
Gene Model: February 12th, 2019
8 months agotrps2 trehalose-6-phosphate synthase2:
1.03
GRMZM2G099860
Zhou, ML et al. 2014. J Plant Growth Reg 33:256-271     Reference: June 26th, 2014
Gene Product: September 15th, 2013
Gene Model: February 11th, 2019
8 months agolw2 lemon white2: like lw1
5.05
GRMZM2G137409
Zhang, LL et al. 2019. Plant Physiol pp.doi: 10.1104/pp.18.01148     Reference: February 8th, 2019
Gene Product: February 8th, 2019
Variation: February 11th, 2019
Gene Model: February 8th, 2019
8 months agooy1 oil yellow1: seedling oily greenish-yellow; viable; fails to convert protoporphyrin IX to Mg-protoporphyrin; oy1-t tinged green; oy1-1039, oy1-1040 lethal; Oy1-700 dominant yellow-green; gene product confirmed by transgenic expression and genetic mapping.
10.02
   Khangura, RS et al. 2019. G3 9:375-390     Reference: February 11th, 2019
Gene Product: June 8th, 2007
Variation: March 17th, 2011
8 months agobnlg1429  :
1.02
       Variation: February 11th, 2019
8 months agoIDP1425  :
1.02
GRMZM2G136081
    Variation: March 31st, 2005
Gene Model: February 11th, 2019
8 months agoIDP2385  :
1.03
GRMZM2G012501
    Variation: March 31st, 2005
Gene Model: February 11th, 2019
8 months agomagi2762  :
1.02
GRMZM2G172410
    Variation: March 31st, 2005
Gene Model: February 11th, 2019
8 months agoIDP29  :
1.02
GRMZM2G080586
    Variation: March 31st, 2005
Gene Model: February 11th, 2019
8 months agoIDP343  : similar to vacuolar protein-sorting-associated protein 37-1 of A. thaliana
1.02
GRMZM2G023575
    Variation: March 31st, 2005
Gene Model: February 11th, 2019
8 months agoIDP622  :
1.02
GRMZM2G009326
    Variation: March 12th, 2007
Gene Model: February 11th, 2019
8 months agoIDP810  :
1.02
GRMZM2G164965
    Variation: March 31st, 2005
Gene Model: February 11th, 2019
8 months agoIDP847  :
1.01
GRMZM2G038485
    Variation: March 31st, 2005
Gene Model: February 11th, 2019
8 months agoIDP871  : similar to RAB GTPase H1E of A. thaliana
1.02
AC166636.1_FG008
    Variation: March 31st, 2005
Gene Model: February 11th, 2019
8 months agoIDP1464  :
1.01
GRMZM2G013634
    Variation: March 31st, 2005
Gene Model: February 10th, 2019
8 months agoIDP2420  :
1.01
GRMZM2G176820
    Variation: March 31st, 2005
Gene Model: February 10th, 2019
8 months agoIDP553  :
1.01
GRMZM2G176397
    Variation: March 31st, 2005
Gene Model: February 10th, 2019
8 months agoIDP658  :
1.02
GRMZM2G070259
    Variation: May 13th, 2006
Gene Model: February 10th, 2019
8 months agoIDP755  : similar to D111/G-patch domain-containing protein of A. thaliana
1.01
GRMZM2G089976
    Variation: March 31st, 2005
Gene Model: February 10th, 2019
8 months agopx14 peroxidase14:
2.03
GRMZM2G108219
Jin, B et al. 2019. PLoS One 14:e0211941     Reference: February 9th, 2019
Gene Product: September 18th, 2015
Variation: February 22nd, 2015
Gene Model: February 23rd, 2015
9 months agopza01089  : candidate modifier of Ga1-s expression (Hurst et al. 2019)
10.04
   Hurst, P et al. 2019. bioRxiv preprint pp.doi: 10.1101/543264     Reference: February 8th, 2019
Variation: January 26th, 2019
9 months agoumc1454  : candidate modifier of Ga1-s expression (Hurst et al. 2019)
2.04
AC235541.1_FG002
Hurst, P et al. 2019. bioRxiv preprint pp.doi: 10.1101/543264     Reference: February 8th, 2019
Variation: September 1st, 2003
Gene Model: February 21st, 2018
9 months agopebp1 phosphatidylethanolamine-binding protein1:
 
   Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: November 17th, 2010
9 months agopebp3 phosphatidylethanolamine-binding protein3:
 
   Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: December 15th, 2010
9 months agopebp7 phosphatidylethanolamine-binding protein7:
 
   Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: June 19th, 2015
9 months agopebp12 phosphatidylethanolamine-binding protein12:
 
   Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: December 10th, 2010
9 months agopebp14 phosphatidylethanolamine-binding protein:
 
   Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: December 15th, 2010
9 months agopebp15 phosphatidylethanolamine-binding protein15:
 
   Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: December 15th, 2010
9 months agopebp18 phosphatidylethanolamine-binding protein18:
 
   Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: December 13th, 2010
9 months agopebp26 phosphatidylethanolamine-binding protein26:
 
GRMZM2G400167
Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: December 14th, 2010
Gene Model: July 28th, 2016
9 months agogi1 gigantea1: homologous to Arabidopsis photoperiod gene gigantea
8.03
GRMZM2G107101
Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: September 19th, 2012
Variation: April 23rd, 2013
Gene Model: September 18th, 2012
9 months agogi2 gigantea2: homologous to Arabidopsis photoperiod gene gigantea.
3.03
GRMZM5G844173
Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: September 19th, 2012
Variation: September 18th, 2012
Gene Model: September 18th, 2012
9 months agoba1 barren stalk1: ear shoots and most tassel branches and spikelets absent
3.06
   Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: July 19th, 2012
Variation: March 18th, 2015
9 months agobif1 barren inflorescence1: dominant Bif1 plants have ear and tassel with many fewer spikelets, bare rachis appendages
8.03 - 8.03
GRMZM2G130953
Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: October 16th, 2015
Variation: October 16th, 2015
Gene Model: October 16th, 2015
9 months agoct2 compact plant2: semi-dwarf plant, 1/3 height; shortened internodes; club tassel, fasciated ear
1.01 - 1.02
GRMZM2G064732
Je, BI, et al. 2018. Elife. 7:doi: 10.7554/eLife.35673.001     Reference: February 7th, 2019
Gene Product: September 16th, 2013
Variation: September 20th, 2013
Gene Model: September 16th, 2013
9 months agogl15 glossy15: glossy leaf surface expressed after 3rd leaf (aka gl4)
9.03
   Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: October 5th, 2012
9 months agora2 ramosa2: tassel many-branched, upright, not conical like ra1; irregular kernel placement
3.03 - 3.03
AC233943.1_FG002
Stephenson, E et al. 2019. PLoS One 14:e0203728   AT5G63090 (TAIR)
LOC_Os01g07480 (MSU/TIGR)
Os01g0169400 (Gramene)
Reference: February 7th, 2019
Gene Product: July 27th, 2009
Variation: September 19th, 2009
Gene Model: July 14th, 2011
9 months agobif4 barren inflorescence4: like Bif1; dominant plants have ear and tassel with many fewer spikelets, bare rachis appendage
 
   Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: October 16th, 2015
Variation: October 16th, 2015
9 months agohb48 Homeobox-transcription factor 48: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Tsuda, K, et al. 2017. Plant Cell. 0:doi: 10.1105/tpc.16.00967     Reference: February 7th, 2019
Variation: April 7th, 2017
9 months agohb76 Homeobox-transcription factor 76: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Tsuda, K, et al. 2017. Plant Cell. 0:doi: 10.1105/tpc.16.00967     Reference: February 7th, 2019
Variation: April 7th, 2017
9 months agozmm15 Zea mays MADS-box 15:
5.01
GRMZM2G553379
Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: June 15th, 2018
Gene Model: June 15th, 2018
9 months agozap1 zea apetala homolog1:
2.10
   Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: February 2nd, 2011
9 months agozmm31 Zea mays MADS31:
5.01
GRMZM2G071620
Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: August 7th, 2008
Gene Model: July 2nd, 2014
9 months agospt*-N1620B spottedN1620B:
4.03 - 4.05
   Neuffer, MG. 1995. Personal communication-mutant collection     Reference: September 1st, 2003
Variation: February 7th, 2019
9 months agozmm24 Zea mays MADS24:
1.10
GRMZM2G087095
Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Variation: February 2nd, 2011
Gene Model: July 2nd, 2014
9 months agogif1 growth-regulating-factor-interacting factor1: mutants are semi-dwarf with narrow leaves and fasciated inflorescence meristems
1.10
GRMZM2G180246
Zhang, D, et al. 2018. Plant Cell. 0:doi: 10.1105/tpc.17.00791   AT5G28640 (TAIR)
LOC_Os03g52320 (MSU/TIGR)
Reference: February 7th, 2019
Gene Product: July 6th, 2015
Variation: February 6th, 2018
Gene Model: July 6th, 2015
9 months agoconz1 constans1: homologous to photoperiod genes constans (co) from Arabidopsis and heading date 1 (hd1) in rice. (Miller 2008)
9.03
   Stephenson, E et al. 2019. PLoS One 14:e0203728     Reference: February 7th, 2019
Gene Product: June 18th, 2018
Variation: July 28th, 2008
9 months agocsu904  :
7.04
GRMZM2G102786
    Variation: September 1st, 2003
Gene Model: February 6th, 2019
9 months agoIDP1466  :
7.06
GRMZM2G133819
    Variation: March 31st, 2005
Gene Model: February 6th, 2019
9 months agoIDP1611  :
7.05
GRMZM2G427937
    Variation: March 31st, 2005
Gene Model: February 6th, 2019
9 months agoIDP1673  :
7.05
GRMZM2G148249
    Variation: March 31st, 2005
Gene Model: February 6th, 2019
9 months agoIDP2594  :
7.04
GRMZM2G382106
    Variation: March 31st, 2005
Gene Model: February 6th, 2019
9 months agoIDP705  : similar to ATP synthase mitochondrial F1 complex assembly factor 2 of A. thaliana
7.05
GRMZM2G003172
    Variation: March 31st, 2005
Gene Model: February 6th, 2019
9 months agoIDP744  :
7.05
GRMZM2G130398
    Variation: March 31st, 2005
Gene Model: February 6th, 2019
9 months agocsu5a  : Was thp1, leaf cDNA csu5 reported similar to Vigna mungo sulfhydryl-endopeptidase; single copy. Not in Entrez neighbors May 1998. similar to cysteine proteinase-like protein of A. thaliana
7.04
GRMZM2G036203
Rixmann, C et al. 1992. in Heller, SR et al. 1992. Abstracts, Plant Genome I, San Diego, CA     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: February 5th, 2019
9 months agoumc1333  : similar to formin-like protein 2 of A. thaliana
7.03
GRMZM2G132486
    Variation: February 5th, 2019
Gene Model: February 5th, 2019
9 months agocdpk11 calcium dependent protein kinase11: encodes a protein that functions in abscisic acid signaling upstream of the MAP kinase encoded by mpk2, aka MPK5 (Ding et al 2012)
 
GRMZM2G047486
Borkiewicz, L et al. 2019. Physiol Plant pp.doi: 10.1111/ppl.12938     Reference: February 5th, 2019
Gene Product: July 9th, 2013
Variation: April 3rd, 2015
Gene Model: July 9th, 2013
9 months agoIDP1704  :
7.03
GRMZM2G052336
    Variation: March 31st, 2005
Gene Model: February 5th, 2019
9 months agoIDP1981  :
7.04
GRMZM2G072054
    Variation: March 31st, 2005
Gene Model: February 5th, 2019
9 months agoIDP2483  :
7.03
GRMZM2G148864
    Variation: March 31st, 2005
Gene Model: February 5th, 2019
9 months agoIDP2590  :
7.04
GRMZM5G886969
    Variation: March 31st, 2005
Gene Model: February 5th, 2019
9 months agoIDP789  :
7.03
GRMZM2G071015
    Variation: March 31st, 2005
Gene Model: February 5th, 2019
9 months agoIDP865  :
7.03
GRMZM2G085670
    Variation: March 31st, 2005
Gene Model: February 5th, 2019
9 months agomagi99589  :
7.03
GRMZM5G870752
    Variation: March 31st, 2005
Gene Model: February 4th, 2019
9 months agoIDP96  :
7.03
GRMZM2G161302
    Variation: March 31st, 2005
Gene Model: February 4th, 2019
9 months agodek15 defective kernel15: collapsed floury endosperm; lethal; cultured embryos green
10.04 - 10.07
GRMZM2G079796
He, YH et al. 2019. Plant Cell pp.doi; 10.1105/tpc.18.00921     Reference: February 1st, 2019
Gene Product: February 1st, 2019
Variation: February 1st, 2019
Gene Model: February 1st, 2019
9 months agohb122 Homeobox-transcription factor 122: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Anand, A et al. 2019. Plant Biotechnol J pp.doi: 10.1111/pbi.13089     Reference: February 1st, 2019
Gene Product: August 25th, 2017
9 months agotlk2 tousled-like protein kinase2:
5.01
   Mazaheri, M et al. 2019. BMC Plant Biology 19:45     Reference: January 31st, 2019
Gene Product: February 15th, 2008
Variation: June 25th, 2015
9 months agoesp1 embryo specific protein1: late embryonic protein, induced by abscisic acid and osmotic stress; cDNA similar to other LEA proteinsortholog of wheat Em; protein and mRNA in embryo from 16 days after pollination
6.05
AC233879.1_FG002
Williams, BA and Tsang, A. 1991. Plant Mol Biol 16:919-923     Reference: September 1st, 2003
Gene Product: January 31st, 2019
Variation: September 1st, 2003
Gene Model: July 27th, 2016
9 months agobnlg1057  :
1.06
   Mazaheri, M et al. 2019. BMC Plant Biology 19:45     Reference: January 31st, 2019
Variation: September 1st, 2003
9 months agolhy1 late hypocotyl elongation protein ortholog1: myb transcription factor - core clock gene (Hayes et al. 2010)
10.03
GRMZM2G474769
Tian, L et al. 2019. PLoS One 14:e0211623     Reference: January 31st, 2019
Gene Product: July 31st, 2016
Variation: December 28th, 2016
Gene Model: December 28th, 2016
9 months agomeg8 maternally expressed gene8:
 
GRMZM2G123153
Xiong, Y et al. 2014. BMC Plant Biology 14:204     Reference: August 29th, 2014
Variation: August 29th, 2014
Gene Model: January 31st, 2019
9 months agolhcb10 light harvesting chlorophyll a/b binding protein10: gene-specific cDNA probe; low expression in bundle sheath cells (aka cab1)unique genomic sequence; promoter is light regulated in tobacco and maize leaf mesophyll protoplasts (Knight et al. 1992)
 
GRMZM2G351977
Mazaheri, M et al. 2019. BMC Plant Biology 19:45     Reference: January 31st, 2019
Gene Product: September 1st, 2003
Gene Model: August 3rd, 2018
9 months agolea14 late embryogenesis abundant protein14: appears to be involved in drought tolerance
 
GRMZM2G050607
Bui, MM et al. 2019. Agronomy 9:62     Reference: January 31st, 2019
Gene Product: January 31st, 2019
Gene Model: January 31st, 2019
9 months agoAY109061  :
7.02
GRMZM2G095562
    Variation: September 25th, 2007
Gene Model: January 31st, 2019
9 months agoAY108844  :
7.04
GRMZM2G121022
    Variation: September 25th, 2007
Gene Model: January 31st, 2019
9 months agoIDP1643  :
7.02
GRMZM2G032944
    Variation: March 31st, 2005
Gene Model: January 31st, 2019
9 months agomagi14814  :
7.02
GRMZM2G160770
    Variation: March 31st, 2005
Gene Model: January 31st, 2019
9 months agoIDP353  :
7.02
GRMZM2G054120
    Variation: March 31st, 2005
Gene Model: January 31st, 2019
9 months agoIDP754  : similar to S-adenosylmethionine decarboxylase 1 beta chain of A. thaliana
7.02
GRMZM2G461159
    Variation: March 31st, 2005
Gene Model: January 31st, 2019
9 months agoIDP767  :
7.02
GRMZM2G053927
    Variation: March 31st, 2005
Gene Model: January 31st, 2019
9 months agoIDP84  :
7.02
GRMZM2G022014
    Variation: March 31st, 2005
Gene Model: January 31st, 2019
9 months agocybc7 cytochrome b-c1 complex subunit 7: encodes an important part of the mitochondrial electron transport chain that can suppress HR mediated by Rp1-D21 in a transient expression assay
 
GRMZM2G318346
He, YJ et al. 2019. Planta pp.doi: 10.1007/s00425-019-03092-8     Reference: January 30th, 2019
Gene Product: January 30th, 2019
Variation: January 30th, 2019
Gene Model: January 30th, 2019
9 months agoIDP1417  :
7.00
GRMZM2G019200
    Variation: March 31st, 2005
Gene Model: January 30th, 2019
9 months agoIDP1688  :
7.00
AC205122.4_FG003
    Variation: March 31st, 2005
Gene Model: January 30th, 2019
9 months agopspb2 photosystem II oxygen evolving polypeptide2: sequence highly similar to OEC23 oxygen evolving complex protein of photosystem II; located peripheral to lumenal side of thylakoid (Huang et al 2013)
7.01
GRMZM2G047954
Huang, M et al. 2013. J Proteome Res 12:491-504     Reference: August 5th, 2014
Gene Product: September 1st, 2003
Variation: March 31st, 2005
Gene Model: January 30th, 2019
9 months agoIDP336  : similar to ankyrin repeat and regulator of chromosome condensation (RCC1) domain-containing protein of A. thaliana
7.01
GRMZM2G443668
    Variation: March 31st, 2005
Gene Model: January 30th, 2019
9 months agoIDP497  :
7.01
GRMZM2G060866
    Variation: March 31st, 2005
Gene Model: January 30th, 2019
9 months agoIDP80  :
7.01
GRMZM2G012324
    Variation: March 31st, 2005
Gene Model: January 30th, 2019
9 months agoba2 barren stalk2: like ba1 except tassel is normal (original description from Emerson, Beadle and Fraser 1935)
2.04 - 2.05
GRMZM2G399641
Yao, H, et al. 2019. Molecular Plant. 0:doi: 10.1016/j.molp.2018.12.024     Reference: January 28th, 2019
Gene Product: January 26th, 2019
Variation: January 26th, 2019
Gene Model: January 26th, 2019
9 months agokwl1 kiwellin1: specifically blocks the catalytic activity of Ustilago maydis secreted fungal chorismate mutase Cmu1, by hindering substrate access to the active site
 
GRMZM2G073114
Han, XW, et al. 2019. Nature. 0:doi: 10.1038/s41586-018-0857-9     Reference: January 28th, 2019
Gene Product: January 22nd, 2019
Gene Model: January 21st, 2019
9 months agocmu3 chorismate mutase3:
 
GRMZM2G028369
Han, XW, et al. 2019. Nature. 0:doi: 10.1038/s41586-018-0857-9     Reference: January 28th, 2019
Gene Product: February 12th, 2014
Gene Model: January 21st, 2019
9 months agocmu2 chorismate mutase2: enzyme activity from protein raised in E coli
5.04
GRMZM2G179454
Han, XW, et al. 2019. Nature. 0:doi: 10.1038/s41586-018-0857-9     Reference: January 28th, 2019
Gene Product: February 12th, 2014
Gene Model: February 12th, 2014
9 months agoms30 male sterile30: like ms1
4.08
GRMZM2G174782
An, XL et al. 2019. Molecular Plant pp.doi: 10.1016/j.molp.2019.01.011     Reference: January 25th, 2019
Gene Product: January 25th, 2019
Variation: January 25th, 2019
Gene Model: January 25th, 2019
9 months agomagi104697  :
9.03
GRMZM2G074085
    Variation: March 31st, 2005
Gene Model: January 25th, 2019
9 months agoIDP2364  :
9.02
GRMZM2G008326
    Variation: March 31st, 2005
Gene Model: January 24th, 2019
9 months agoIDP2406  :
9.03
GRMZM2G110993
    Variation: March 31st, 2005
Gene Model: January 24th, 2019
9 months agoIDP534  :
9.04
GRMZM2G124567
    Variation: March 31st, 2005
Gene Model: January 24th, 2019
9 months agoIDP809  :
9.04
GRMZM5G842855
    Variation: March 31st, 2005
Gene Model: January 24th, 2019
9 months agoIDP850  :
9.07
AC149475.2_FG002
    Variation: March 31st, 2005
Gene Model: January 24th, 2019
9 months agonagk1 N-acetylglutamate kinase1: catalyzes the second step of arginine biosynthesis
2.03
GRMZM2G132777
Liu, WJ et al. 2019. Frontiers Plant Sci pp.doi: 10.3389/fpls.2018.01902     Reference: January 23rd, 2019
Gene Product: January 23rd, 2019
Gene Model: January 23rd, 2019
9 months agoIDP1419  :
9.07
GRMZM2G060564
    Variation: March 31st, 2005
Gene Model: January 23rd, 2019
9 months agoumc2558  :
9.04
GRMZM2G020468
    Variation: January 22nd, 2019
Gene Model: January 23rd, 2019
9 months agoIDP2462  :
9.06
GRMZM2G138589
    Variation: March 31st, 2005
Gene Model: January 22nd, 2019
9 months agoIDP248  : similar to homogentisate 1,2-dioxygenase of A. thaliana
9.03
GRMZM2G154093
    Variation: March 31st, 2005
Gene Model: January 22nd, 2019
9 months agoIDP256  :
9.03
GRMZM2G112951
    Variation: March 31st, 2005
Gene Model: January 22nd, 2019
9 months agoIDP2570  :
9.02
GRMZM2G100873
    Variation: March 31st, 2005
Gene Model: January 22nd, 2019
9 months agoIDP300  :
9.04
GRMZM2G005869
    Variation: March 31st, 2005
Gene Model: January 22nd, 2019
9 months agoIDP310  :
9.04
GRMZM2G359070
    Variation: March 31st, 2005
Gene Model: January 22nd, 2019
9 months agoIDP375  :
9.03
GRMZM2G034015
    Variation: March 31st, 2005
Gene Model: January 22nd, 2019
9 months agoIDP65  : similar to 60S ribosomal protein L23 of A. thaliana
9.07
GRMZM2G171181
    Variation: March 31st, 2005
Gene Model: January 22nd, 2019
9 months agoIDP708  :
9.04
GRMZM2G152417
    Variation: March 31st, 2005
Gene Model: January 22nd, 2019
9 months agoIDP717  :
9.03
GRMZM2G097995
    Variation: March 31st, 2005
Gene Model: January 22nd, 2019
9 months agoIDP756  : similar to 40S ribosomal protein S15a-5 of A. thaliana
9.04
GRMZM2G007103
    Variation: September 25th, 2007
Gene Model: January 22nd, 2019
9 months agoIDP760  :
9.01
GRMZM2G152177
    Variation: March 31st, 2005
Gene Model: January 22nd, 2019
9 months agosun3 SUN domain protein3: plant-prevalent mid-SUN 3 transmembrane (PM3) type nuclear envelope protein
 
GRMZM2G120262
Gumber, HK et al. 2019. J Cell Sci pp.doi: 10.1242/jcs.221390     Reference: January 19th, 2019
Gene Model: January 21st, 2019
Recommended by Hank (Henry) Bass:
April 19th, 2011
9 months agosun1 SUN domain protein1: canonical C-terminal SUN-domain (CCSD) type nuclear envelope protein
 
GRMZM2G109818
Gumber, HK et al. 2019. J Cell Sci pp.doi: 10.1242/jcs.221390     Reference: January 19th, 2019
Variation: April 20th, 2011
Gene Model: April 20th, 2011
Recommended by Hank (Henry) Bass:
April 19th, 2011
9 months agosun2 SUN domain protein2:
 
GRMZM2G440614
Gumber, HK et al. 2019. J Cell Sci pp.doi: 10.1242/jcs.221390     Reference: January 19th, 2019
Variation: April 20th, 2011
Gene Model: April 20th, 2011
Recommended by Hank (Henry) Bass:
April 19th, 2011
9 months agosun4 SUN domain protein4:
 
   Gumber, HK et al. 2019. J Cell Sci pp.doi: 10.1242/jcs.221390     Reference: January 19th, 2019
Variation: April 20th, 2011
Recommended by Hank (Henry) Bass:
April 19th, 2011
9 months agosun5 SUN domain protein5: plant-prevalent mid-SUN 3 transmembrane (PM3) type nuclear envelope protein; may be pollen specific
 
AC194341.4_FG003
Gumber, HK et al. 2019. J Cell Sci pp.doi: 10.1242/jcs.221390     Reference: January 19th, 2019
Variation: April 20th, 2011
Gene Model: April 20th, 2011
Recommended by Hank (Henry) Bass:
April 19th, 2011
9 months agohsp10 heat shock protein10: Sequence shows similarity to Arabidopsis HSP18.2
1.03
GRMZM2G481529
Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: January 15th, 2019
Variation: August 8th, 2017
Gene Model: August 8th, 2017
9 months agohex1 hexokinase1: electrophoretic mobility; null allele is known; cytosolic; monomeric
3.02 - 3.03
GRMZM2G104081
Aguilera-Alvarado, GP et al. 2019. BMC Plant Biology 19:27     Reference: January 15th, 2019
Gene Product: September 15th, 2013
Variation: February 15th, 2010
Gene Model: September 15th, 2013
9 months agohex2 hexokinase2: electrophoretic mobility; null allele is known; cytosolic; monomeric
6.04 - 6.05
GRMZM2G432801
Aguilera-Alvarado, GP et al. 2019. BMC Plant Biology 19:27     Reference: January 15th, 2019
Gene Product: September 15th, 2013
Variation: February 15th, 2010
Gene Model: September 15th, 2013
9 months agohex4 hexokinase4:
 
GRMZM2G068913
Aguilera-Alvarado, GP et al. 2019. BMC Plant Biology 19:27     Reference: January 15th, 2019
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
9 months agohex5 hexokinase5:
 
GRMZM5G856653
Aguilera-Alvarado, GP et al. 2019. BMC Plant Biology 19:27     Reference: January 15th, 2019
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
9 months agohex6 hexokinase6:
 
GRMZM2G171373
Aguilera-Alvarado, GP et al. 2019. BMC Plant Biology 19:27     Reference: January 15th, 2019
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
9 months agohex7 hexokinase7:
 
GRMZM2G051806
Aguilera-Alvarado, GP et al. 2019. BMC Plant Biology 19:27     Reference: January 15th, 2019
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
9 months agohex8 hexokinase8:
 
GRMZM2G046686
Aguilera-Alvarado, GP et al. 2019. BMC Plant Biology 19:27     Reference: January 15th, 2019
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
9 months agohex9 hexokinase9:
 
GRMZM2G467069
Aguilera-Alvarado, GP et al. 2019. BMC Plant Biology 19:27     Reference: January 15th, 2019
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
9 months agohsp22 heat shock protein22: mitochondrial protein
4.07
GRMZM2G007729
Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: January 15th, 2019
Gene Model: October 18th, 2013
9 months agohsp8 heat shock protein8:
 
GRMZM2G080724
Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: January 15th, 2019
Gene Model: January 14th, 2019
9 months agohsp9 heat shock protein9:
 
GRMZM2G046382
Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: January 15th, 2019
Gene Model: January 14th, 2019
9 months agohsp11 heat shock protein11:
 
GRMZM2G306679
Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: January 15th, 2019
Gene Model: January 14th, 2019
9 months agohsp12 heat shock protein12:
 
GRMZM2G158232
Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: January 15th, 2019
Gene Model: January 14th, 2019
9 months agohsp17.2 heat shock protein17.2: seedling expressed heat shock protein; cDNA sequence similar to other plant 18 kDa heat shock proteins but distinct in maize
3.04
GRMZM2G422240
Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: March 3rd, 2015
9 months agoles*-A467 lesion*-A467: recessive les* plants have late, large, necrotic lesions
 
   Johal, GS; Hulbert, SH; Briggs, SP. 1995. Disease lesion mimics of maize: A model for cell death in plants. Bioessays 17:685-692     Reference: September 1st, 2003
Variation: January 14th, 2019
9 months agocsu1118  :
9.07
GRMZM5G860976
Baysdorfer, C. 1996. Nucleotide sequence submission to dbEST     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: January 14th, 2019
9 months agohsp1 heat shock protein1: genomic clones, single copy (Southern blots), transcribed (Northern blots), transgenic (petunia) expression
8.01
   Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: September 1st, 2003
Variation: September 1st, 2003
9 months agohsp90 heat shock protein, 90 kDa: heat-induced; encoded protein interacts with HSP101
10.04
GRMZM5G833699
Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: January 14th, 2019
Variation: September 1st, 2003
Gene Model: November 3rd, 2014
9 months agohsp26 heat shock protein26: was umc195; cDNA, single mRNA species induced by heat shock, in vitro HSP26 imported by isolated chloroplasts, cross-reacts with anti-pea-chloroplast-HSP21 antibodies
1.03
GRMZM2G149647
Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: September 1st, 2003
Variation: January 30th, 2015
Gene Model: January 30th, 2015
9 months agocsu43  : gene specific probe, partially sequenced cDNA to leaf mRNA
9.04
GRMZM2G152105
Baysdorfer, C. 1993. Personal communication to MaizeDB     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: January 14th, 2019
9 months agocdj1 chaperone DNA J homolog1: leaf cDNA csu63, deduced amino acid sequence nearly identical to chaperone DNA J, multiple copies
1.11
GRMZM2G134917
Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: September 1st, 2003
Variation: September 29th, 2012
Gene Model: July 27th, 2016
9 months agohsp18f heat shock protein18f: induction by heat shock is developmentally constitutive
3.02
   Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: September 1st, 2003
Variation: July 18th, 2014
9 months agohsp70-4 heat shock protein70-4:
3.05
   Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: September 1st, 2003
Variation: January 2nd, 2013
9 months agocsu193  : single copy, novel leaf cDNA sequence
9.03
GRMZM2G019586
Baysdorfer, C. 1994. cDNA sequence submission to dbEST     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: January 14th, 2019
9 months agohsp6 heat shock protein6:
 
AC209784.3_FG007
Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: September 1st, 2003
Gene Model: January 14th, 2019
9 months agohsp7 heat shock protein7:
 
GRMZM5G802801
Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: September 1st, 2003
Gene Model: January 14th, 2019
9 months agohsp5 heat shock protein5:
9.06
GRMZM2G366532
Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: September 1st, 2003
Gene Model: January 14th, 2019
9 months agoIDP1637  :
9.00
GRMZM5G811223
    Variation: March 31st, 2005
Gene Model: January 14th, 2019
9 months agoc3h6 C3H-transcription factor 36: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
9.04
GRMZM2G086614
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Variation: March 31st, 2005
Gene Model: January 14th, 2019
9 months agoIDP1669  : similar to Arabidopsis LRR receptor-like serine/threonine-protein kinase FEI 2
9.06
GRMZM2G479243
    Variation: March 31st, 2005
Gene Model: January 14th, 2019
9 months agoIDP1681  : similar to protein arginine N-methyltransferase 7 of A. thaliana
9.03
GRMZM2G037624
    Variation: March 31st, 2005
Gene Model: January 14th, 2019
9 months agoIDP1984  :
9.03
GRMZM2G171616
    Variation: March 31st, 2005
Gene Model: January 14th, 2019
9 months agoIDP2142  : similar to alpha-1,4-galacturonosyltransferase of A. thaliana
9.06
GRMZM2G113506
    Variation: March 31st, 2005
Gene Model: January 14th, 2019
9 months agohsp4 heat shock protein4:
7.02
GRMZM2G069651
Qian, YX et al. 2019. Gene pp.doi: 10.1016/j.gene.2018.12.062     Reference: January 14th, 2019
Gene Product: January 14th, 2019
Gene Model: January 14th, 2019
9 months agoIDP1969  : similar to ferredoxin 2 of A. thaliana
9.01
GRMZM2G013607
    Variation: March 31st, 2005
Gene Model: January 13th, 2019
9 months agoAY110782  :
9.04
GRMZM2G431243
    Variation: September 25th, 2007
Gene Model: January 12th, 2019
9 months agoIDP111  : imilar to Arabidopsis CP12 domain-containing protein 1
9.01
GRMZM2G480850
    Variation: March 31st, 2005
Gene Model: January 12th, 2019
9 months agoanx1 annexin1:
 
GRMZM2G064993
He, F et al. 2019. J Exp Bot pp.doi: 10.1093/jxb/ery452     Reference: January 11th, 2019
Variation: October 16th, 2013
Gene Model: July 27th, 2016
9 months agobbx7 b-box7:
 
GRMZM5G813532
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: January 11th, 2019
Gene Model: January 10th, 2019
9 months agobbx11 b-box11:
 
   Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: January 11th, 2019
9 months agobbx12 b-box12:
 
   Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: January 11th, 2019
9 months agobbx13 b-box13:
 
GRMZM2G438979
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: January 11th, 2019
Gene Model: January 10th, 2019
9 months agobbx17 b-box17:
 
GRMZM2G146614
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: January 11th, 2019
Gene Model: January 10th, 2019
9 months agobbx24 b-box24:
 
GRMZM2G354319
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: January 11th, 2019
Gene Model: January 10th, 2019
9 months agobbx26 b-box26:
 
GRMZM2G415711
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: January 11th, 2019
Gene Model: January 10th, 2019
9 months agobbx34 b-box34:
 
GRMZM2G056126
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: January 11th, 2019
Gene Model: January 10th, 2019
9 months agoanx2 annexin2:
5.07
GRMZM2G061950
He, F et al. 2019. J Exp Bot pp.doi: 10.1093/jxb/ery452     Reference: January 11th, 2019
Variation: October 15th, 2013
Gene Model: July 27th, 2016
9 months agocol10 C2C2-CO-like-transcription factor 10: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
9 months agocol13 C2C2-CO-like-transcription factor 13: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
9 months agocol14 C2C2-CO-like-transcription factor 14: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
9 months agocol2 C2C2-CO-like-transcription factor 2: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
9 months agocol3 C2C2-CO-like-transcription factor 3: Functions as a repressor of flowering
 
   Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
9 months agocol4 C2C2-CO-like-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
9 months agocol5 C2C2-CO-like-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
9 months agocol6 C2C2-CO-like-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
9 months agocol7 C2C2-CO-like-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
9 months agocol8 C2C2-CO-like-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
9 months agoprf5 Profilin homolog5: Deduced amino acid sequence shares 95% identity with PRF4 (aka ZmPRO4) and 79-80% identity with other maize profilins PRF1, PRF2 and PRF3.
9.02
GRMZM5G877388
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: September 1st, 2003
Variation: July 14th, 2008
Gene Model: January 15th, 2015
9 months agocol12 2C2-CO-like-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.NCBI: zinc finger protein CONSTANS-LIKE 16
5.07
GRMZM2G041991
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: September 1st, 2003
Variation: March 31st, 2017
Gene Model: March 31st, 2017
9 months agocol11 C2C2-CO-like-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also
2.04
GRMZM2G095598
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
Variation: October 9th, 2018
Gene Model: June 18th, 2018
9 months agodbb2 double B-box zinc finger protein2:
 
GRMZM2G131982
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: May 10th, 2017
Gene Model: May 10th, 2017
9 months agodbb3 double B-box zinc finger protein3: similar to Arabidopsis light-regulated zinc finger protein 1
 
GRMZM5G834596
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: May 10th, 2017
Variation: May 10th, 2017
Gene Model: May 10th, 2017
9 months agodbb5 double B-box zinc finger protein5:
 
GRMZM2G118884
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: May 10th, 2017
Gene Model: May 10th, 2017
9 months agodbb8 double B-box zinc finger protein8:
 
GRMZM2G070446
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: May 10th, 2017
Variation: May 10th, 2017
Gene Model: May 10th, 2017
9 months agodbb9 double B-box zinc finger protein9:
 
GRMZM2G116475
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: May 10th, 2017
Variation: May 10th, 2017
Gene Model: May 10th, 2017
9 months agodbb10 double B-box zinc finger protein10:
 
GRMZM2G143718
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: May 10th, 2017
Variation: May 10th, 2017
Gene Model: May 10th, 2017
9 months agodbb11 double B-box zinc finger protein11:
 
GRMZM2G028594
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: May 10th, 2017
Variation: May 10th, 2017
Gene Model: May 10th, 2017
9 months agodbb12 double B-box zinc finger protein12:
 
GRMZM2G098442
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: May 10th, 2017
Gene Model: May 10th, 2017
9 months agocol17 C2C2-CO-like-transcription factor 17:
 
GRMZM2G176173
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
Gene Model: June 16th, 2018
9 months agocol19 C2C2-CO-like-transcription factor 19:
 
GRMZM2G092363
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
Gene Model: June 16th, 2018
9 months agocol15 C2C2-CO-like-transcription factor 1:
1.04
GRMZM2G134671
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
Gene Model: June 16th, 2018
9 months agodbb4 double B-box zinc finger protein4:
4.05
GRMZM2G019335
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: May 10th, 2017
Variation: May 10th, 2017
Gene Model: May 10th, 2017
10 months agogl3 glossy3: like gl1, but surface wax has all rice-grain-type particles
4.08
GRMZM2G162434
Rallapalli, G et al. 2019. BMC Bioinformatics 20:9     Reference: January 9th, 2019
Gene Product: June 2nd, 2012
Variation: June 2nd, 2012
Gene Model: June 2nd, 2012
10 months agophp20075b(ext)  : similar to Arabidopsis putative gibberellin-regulated protein
9.03
GRMZM2G105364
Noonan, J et al. 2017. Int J Mol Sci 8:E1938     Reference: September 16th, 2017
Variation: September 1st, 2003
Gene Model: January 9th, 2019
10 months agoglpdh1 glycerol-3-phosphate dehydrogenase1: NAD+-dependent type A
 
GRMZM2G155348
Zhao, Y et al. 2019. BMC Plant Biology 19:16     Reference: January 9th, 2019
Gene Product: July 12th, 2018
Gene Model: July 11th, 2018
10 months agomac1 multiple archesporial cells1: (was lar*-487) several archesporial cells undergo normal meiosis; plants partially female sterile but completely male sterileBeware: this locus could accidentally be confused with the act1 (actin 1) locus, which also was called MAc1 in past publications!
10.03
GRMZM2G027522
van der Linde, K; Walbot, V. 2019. Current Topics in Developmental Biology 131:239-256     Reference: January 8th, 2019
Gene Product: August 2nd, 2012
Variation: August 10th, 2012
Gene Model: July 26th, 2012
Recommended by Chung-Ju Rachel Wang:
December 19th, 2013
10 months agoms*-6015  :
 
   van der Linde, K; Walbot, V. 2019. Current Topics in Developmental Biology 131:239-256     Reference: January 8th, 2019
Variation: August 8th, 2014
10 months agoam1 ameiotic1: male and female sterility - anaphase I equatorial; alleles am1-pra1(was pra1), am1-2 (was am2)affects switch to meiotic cell cycle
5.02
   van der Linde, K; Walbot, V. 2019. Current Topics in Developmental Biology 131:239-256     Reference: January 8th, 2019
Variation: August 11th, 2011
10 months agoms13 male sterile13: like ms5; affected at microspore vacuolation
5.00 - 5.01
   van der Linde, K; Walbot, V. 2019. Current Topics in Developmental Biology 131:239-256     Reference: January 8th, 2019
Variation: May 27th, 2004
10 months agoms22 male sterile22: pollen mother cells degenerate
7.02
GRMZM2G442791
van der Linde, K; Walbot, V. 2019. Current Topics in Developmental Biology 131:239-256     Reference: January 8th, 2019
Gene Product: August 12th, 2012
Variation: February 12th, 2013
Gene Model: August 11th, 2012
10 months agoms9 male sterile9: breakdown of pollen mother cellsLocus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.03
GRMZM2G308034
van der Linde, K; Walbot, V. 2019. Current Topics in Developmental Biology 131:239-256     Reference: January 8th, 2019
Gene Product: September 1st, 2003
Variation: July 18th, 2015
Gene Model: July 18th, 2015
10 months agoes4 embryo sac4: one of 4-5 copy gene family; pre-zygotic, embryo sac specific; required for pollen tube growth arrest and burst
 
GRMZM2G009359
Zhou, LZ; Dresselhaus, T. 2019. Current Topics in Developmental Biology 131:453-496     Reference: January 8th, 2019
Gene Product: April 22nd, 2011
Variation: April 25th, 2011
Gene Model: April 22nd, 2011
10 months agoes1 embryo sac1: one of 4-5 copy gene family; pre-zygotic embryo sac specific; required for pollen tube growth arrest and burst
 
GRMZM2G012012
Zhou, LZ; Dresselhaus, T. 2019. Current Topics in Developmental Biology 131:453-496     Reference: January 8th, 2019
Gene Product: April 22nd, 2011
Variation: April 25th, 2011
Gene Model: April 22nd, 2011
10 months agoes2 embryo sac2: one of 4-5 copy gene family; pre-zygotic embryo sac specific; required for pollen tube growth arrest and burst
 
GRMZM2G009359
Zhou, LZ; Dresselhaus, T. 2019. Current Topics in Developmental Biology 131:453-496     Reference: January 8th, 2019
Gene Product: April 22nd, 2011
Gene Model: April 22nd, 2011
10 months agoes3 embryo sac3: one of 4-5 copy gene family; pre-zygotic embyro sac specific; required for pollen tube growth arrest and burst
 
GRMZM2G009359
Zhou, LZ; Dresselhaus, T. 2019. Current Topics in Developmental Biology 131:453-496     Reference: January 8th, 2019
Gene Product: April 22nd, 2011
Gene Model: April 22nd, 2011
10 months agoms32 male sterile32: like ms1
2.00 - 2.10
GRMZM2G163233
van der Linde, K; Walbot, V. 2019. Current Topics in Developmental Biology 131:239-256     Reference: January 8th, 2019
Gene Product: September 2nd, 2013
Variation: December 4th, 2016
Gene Model: September 2nd, 2013
10 months agoocl4 outer cell layer4:
1.05 - 1.06
   van der Linde, K; Walbot, V. 2019. Current Topics in Developmental Biology 131:239-256     Reference: January 8th, 2019
Gene Product: September 1st, 2003
Variation: February 23rd, 2013
10 months agosweet4b sugars will eventually be exported transporter4b:
5.04
GRMZM2G144581
Sosso, D et al. 2018. Plant Physiol. doi: 10.1104/pp.18.01435     Reference: January 8th, 2019
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
10 months agopmei3 pectin methylesterase inhibitor3:
6.05
   Woriedh, M et al. 2013. Plant Reproduction 26:255-266     Reference: January 8th, 2019
Gene Product: January 8th, 2019
Variation: September 25th, 2007
10 months agotcl1 tapetal cell layer1: Mutant fails to form coherent middle and tapetal layers, and there are extra cells between the endothecial and inner sporogenous (AR) cells.
 
   van der Linde, K; Walbot, V. 2019. Current Topics in Developmental Biology 131:239-256     Reference: January 8th, 2019
Variation: February 12th, 2013
10 months agosweet4a sugars will eventually be exported transporter4a:
 
GRMZM2G000812
Sosso, D et al. 2018. Plant Physiol. doi: 10.1104/pp.18.01435     Reference: January 8th, 2019
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
10 months agopmei2 pectin methylesterase inhibitor2:
 
GRMZM2G122230
Woriedh, M et al. 2013. Plant Reproduction 26:255-266     Reference: January 8th, 2019
Gene Product: January 8th, 2019
Gene Model: January 8th, 2019
10 months agopmei4 pectin methylesterase inhibitor4:
 
GRMZM2G457612
Woriedh, M et al. 2013. Plant Reproduction 26:255-266     Reference: January 8th, 2019
Gene Product: January 8th, 2019
Gene Model: January 8th, 2019
10 months agopmei5 pectin methylesterase inhibitor5:
 
GRMZM5G888934
Woriedh, M et al. 2013. Plant Reproduction 26:255-266     Reference: January 8th, 2019
Gene Product: January 8th, 2019
Gene Model: January 8th, 2019
10 months agopmei6 pectin methylesterase inhibitor6:
 
GRMZM2G343236
Woriedh, M et al. 2013. Plant Reproduction 26:255-266     Reference: January 8th, 2019
Gene Product: January 8th, 2019
Gene Model: January 8th, 2019
10 months agopmei1 pectin methylesterase inhibitor1:
6.07
GRMZM2G079661
Woriedh, M et al. 2013. Plant Reproduction 26:255-266     Reference: January 8th, 2019
Gene Product: January 8th, 2019
Gene Model: January 8th, 2019
10 months agortl3 reversion-to-ethylene sensitivity1 like3: Over-expression reduces ethylene responses (Shi et al. 2016)
 
GRMZM2G121208
Zheng, LJ et al. 2019. Mol Genet Genomics pp.doi: 10.1007/s00438-018-1524-4     Reference: January 4th, 2019
Variation: June 10th, 2016
Gene Model: June 10th, 2016
10 months agoexpb14 beta expansin14: may be involved in seed expansion during kernel development
 
GRMZM2G118873
Zheng, LJ et al. 2019. Mol Genet Genomics pp.doi: 10.1007/s00438-018-1524-4     Reference: January 4th, 2019
Gene Product: April 24th, 2008
Gene Model: January 4th, 2019
10 months agoexpb15 beta expansin15: may be involved in seed expansion during kernel development
 
GRMZM2G121308
Zheng, LJ et al. 2019. Mol Genet Genomics pp.doi: 10.1007/s00438-018-1524-4     Reference: January 4th, 2019
Gene Product: April 24th, 2008
Gene Model: January 4th, 2019
10 months agoaasr2 abscisic acid stress ripening2:
2.05
GRMZM5G854138
Zhang, J et al. 2019. Int J Mol Sci 20:133     Reference: January 2nd, 2019
Gene Product: December 1st, 2011
Variation: November 22nd, 2011
Gene Model: November 1st, 2011
10 months agoaasr6 abscisic acid stress ripening6:
5.04
GRMZM2G057841
Zhang, J et al. 2019. Int J Mol Sci 20:133     Reference: January 2nd, 2019
Gene Product: January 2nd, 2019
Variation: November 12th, 2014
Gene Model: November 1st, 2011
10 months agoaasr9 abscisic acid stress ripening9:
3.04
GRMZM2G383699
Zhang, J et al. 2019. Int J Mol Sci 20:133     Reference: January 2nd, 2019
Gene Product: January 2nd, 2019
Gene Model: November 1st, 2011
10 months agobss1 bundle sheath strands specific1: encodes a photosynthesis-related protein with a deduced amino acid sequence with high homology to tomato Asr1 in the C-terminal region; stress-inducilible;
8.06
GRMZM2G168552
Zhang, J et al. 2019. Int J Mol Sci 20:133     Reference: January 2nd, 2019
Gene Product: December 1st, 2011
Variation: November 1st, 2011
Gene Model: November 1st, 2011
10 months agoaasr7 abscisic acid stress ripening7:
 
GRMZM2G014797
Zhang, J et al. 2019. Int J Mol Sci 20:133     Reference: January 2nd, 2019
Gene Product: January 2nd, 2019
Gene Model: November 1st, 2011
10 months agoaasr8 abscisic acid stress ripening8:
 
GRMZM2G314075
Zhang, J et al. 2019. Int J Mol Sci 20:133     Reference: January 2nd, 2019
Gene Product: January 2nd, 2019
Gene Model: November 1st, 2011
10 months agoaasr10 abscisic acid stress ripening10:
 
GRMZM2G009792
Zhang, J et al. 2019. Int J Mol Sci 20:133     Reference: January 2nd, 2019
Gene Product: January 2nd, 2019
Gene Model: January 2nd, 2019
10 months agosnrk1a2 SNF1-related kinase alpha1-like2:
 
GRMZM2G180704
Wang, J et al. 2018. Gene doi: 10.1016/j.gene.2018.     Reference: December 31st, 2018
Gene Product: December 31st, 2018
Gene Model: February 13th, 2014
10 months agosnrk1a1 SNF1-related kinase alpha1-like1:
6.06
GRMZM2G077278
Wang, J et al. 2018. Gene doi: 10.1016/j.gene.2018.     Reference: December 31st, 2018
Gene Product: December 31st, 2018
Gene Model: February 7th, 2018
10 months agoabp1 auxin binding protein1: putative auxin receptor, single band in Southerns, endoplasmic reticulum and plasma membrane locales (aka axr1, aux311)Dominant Scmv1 and Scmv2 confer resistance
3.05 - 3.05
   Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: September 1st, 2003
Variation: August 23rd, 2017
10 months agoabp4 auxin binding protein homolog4: putative auxin receptor, genomic clone, promoter-reporter gene fusion functional in maize leaf protoplasts. cDNA ZmERabp4 probes one band on Southerns
10.03
   Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: September 1st, 2003
Variation: May 26th, 2005
10 months agoaic3 auxin import carrier3: part of gene family that maintains auxin distribution pattern against environmental or developmental influences
1.03
GRMZM2G149481
Yue, R et al. 2015. PLoS One 10:e0118751     Reference: December 28th, 2018
Gene Product: April 19th, 2017
Gene Model: April 19th, 2017
10 months agorum1 rootless with undetectable meristems1: primordia for seminal roots and for laterals on the primary root absent
 
GRMZM2G037368
Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: June 16th, 2014
Variation: June 16th, 2014
Gene Model: June 16th, 2014
10 months agopin5 PIN-formed protein5: similar to Arabidopsis PIN5 (Forestan et al 2012)
 
GRMZM2G025742
Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: April 21st, 2014
Gene Model: January 24th, 2013
10 months agopin7 PIN-formed protein7: simlar to Arabidopsis PIN5 (Forestan et al 2012)
 
GRMZM2G148648
Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: April 21st, 2014
Gene Model: January 24th, 2013
10 months agopin11 PIN-formed protein11: similar to Arabidopsis PIN5 (Forestan et al 2012)
 
GRMZM2G040911
Matthes, MS et al. 2018. Mol Plant. doi: 10.1016/j.molp.2018.12.012     Reference: December 28th, 2018
Gene Product: April 21st, 2014
Gene Model: January 24th, 2013
10 months agoaic2 auxin