Newly Characterized Genes

CHECK HERE FOR DESCRIPTIONS OF NEWLY CHARACTERIZED MAIZE GENES!

With the overwhelming number of genes that are being discovered by phenotypic and sequence analyses, the MaizeGDB staff is missing some that should be included in MaizeGDB. We need your help! Please let us know about new genes that you're working on or have recently read about.

MaizeGDB prefers not to assign formal gene names to gene models based purely on orthology. Known difficulties include inclusivity (there are over 10,000 functionally characterized Arabidopsis genes)* and some likelihood of errors in inferred functions. Unlike gene models, gene names are generally conserved unless differently named genes are found to be allelic. Of particular note, naming priveleges are customarily held by researchers who first confirm function.

We encourage researchers to use the annotation tool on the MaizeGDB gene model pages to add their insights about putative function, especially when not currently part of the Phytozome or Gramene pipelines.

Below is a list of newly reported or newly characterized genes (new reference, new gene product, and/or new variation) with which you may not yet be familiar. The genes are sorted by the last time the gene has been updated. To suggest genes for inclusion in this list, email us and include the gene name, full name, chromosome or bin, and a recent reference.

If you cannot find the gene you would like to recommend in the database, send us an email so that we can add it to the database!

This page is based on our monthly release. The updates are made around 4:00am CST.


         Recommended Genes


Most recent data | Six months | One year | All time

New or updated genes since six months ago. The cutoff date is February 12th, 2020.

Last UpdateGeneFull Name : DescriptionChromosome
or Bin
Gene
Model
Recent ReferenceOrthologsUpdate information
yesterdaynut1 necrotic upper tips1: Ac-tagged mutation, necrotic upper leaf tips and blasted tassel.
 
GRMZM2G041668
Dong, ZB et al. 2020. Proc Natl Acad Sci, USA pp.doi: 10.1073/pnas.2005014117   AT1G12260 (TAIR)
LOC_Os06g01480 (MSU/TIGR)
Reference: August 11th, 2020
Gene Product: July 8th, 2019
Variation: August 11th, 2020
Gene Model: November 15th, 2017
5 days agomha2 plasma-membrane H+ATPase2: cDNA sequence similar to plant plasma-membrane [H+]-ATPase and distinct from mha1
2.02
   Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Variation: May 13th, 2009
5 days agomyb75 MYB-transcription factor 75: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also
1.04
   Wang, D, et al. 2020. Genetics. 0:doi: 10.1534/genetics.120.303264     Reference: August 7th, 2020
Variation: September 25th, 2007
5 days agorap2 rap2.7 orthologue: negative regulator of flowering time; vgt1 acts as an enhancer (Salvi et al. 2007)
8.06
GRMZM2G700665
Sun, YH, et al. 2020. Genome Biol. 21:143     Reference: August 7th, 2020
Gene Product: July 5th, 2019
Variation: July 24th, 2019
Gene Model: November 20th, 2012
5 days agolox3 lipoxygenase3:
3.06
   Sun, YH, et al. 2020. Genome Biol. 21:143     Reference: August 7th, 2020
Gene Product: January 3rd, 2018
Variation: November 14th, 2014
5 days agomha8 membrane H(+)-ATPase8:
9.02
GRMZM2G455557
Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Gene Model: June 15th, 2020
5 days agomha13 membrane H(+)-ATPase13:
1.09
   Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: September 1st, 2003
5 days agoan1 anther ear1: andromonoecious dwarf, intermediate stature; few tassel branches; responds to gibberellins; an1-6923 includes deletion of Bz2+
1.08
GRMZM2G081554
Sun, YH, et al. 2020. Genome Biol. 21:143     Reference: August 7th, 2020
Gene Product: August 16th, 2012
Variation: May 13th, 2020
Gene Model: November 7th, 2011
5 days agobx1 benzoxazinless1: plastid localized, committed step in cyclic hydroxamates/DIMBOA synthesis; insect resistance in young seedlings; SSR umc1022
4.00
GRMZM2G085381
Sun, YH, et al. 2020. Genome Biol. 21:143     Reference: August 7th, 2020
Gene Product: October 14th, 2011
Variation: April 12th, 2019
Gene Model: October 14th, 2011
5 days agogt1 grassy tillers1: numerous basal branches; vegetatively totipotent in combination with id1 and factors for perennialismputative transcription factor that reduces branching, and is induced by shade
1.04
GRMZM2G005624
Sun, YH, et al. 2020. Genome Biol. 21:143     Reference: August 7th, 2020
Gene Product: March 5th, 2012
Variation: August 18th, 2011
Gene Model: March 5th, 2012
5 days agokn1 knotted1: dominant Kn1 plants have localized proliferation of tissue at vascular bundles on leaf
1.10
   Sun, YH, et al. 2020. Genome Biol. 21:143     Reference: August 7th, 2020
Variation: December 6th, 2013
5 days agodhn2 dehydrin2: polymorphic protein in embryos of some inbredssimilar to Arabidopsis dehydrin Rab18
9.03
GRMZM2G098750
Castorina, G, et al. 2020. Plant Physiol. 0:doi: 10.1104/pp.20.00322     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Gene Model: October 12th, 2018
5 days agop1 pericarp color1: dominant P1 regulates red pigment (phlobaphenes) in cob and pericarp (ex. P1-wr red cob; P1-rr red pericarp and cob) and in tassel glumes and husks; tissue-specific allele variations; SSR phi095; myb homologue
1.03
   Wang, D, et al. 2020. Genetics. 0:doi: 10.1534/genetics.120.303264     Reference: August 7th, 2020
Gene Product: October 13th, 2010
Variation: April 23rd, 2020
5 days agosk1 silkless ears1: pistils abort, no silks
2.03 - 2.04
GRMZM2G021786
Sun, YH, et al. 2020. Genome Biol. 21:143   AT3G22250 (TAIR)
LOC_Os04g44354 (MSU/TIGR)
Reference: August 7th, 2020
Gene Product: September 24th, 2018
Variation: August 21st, 2018
Gene Model: October 31st, 2016
5 days agotb1 teosinte branched1: many tillers; ear branches tassel-like; affects apical dominanceGRASSIUS: TCP transcription factor (TCP1)
1.09
   Sun, YH, et al. 2020. Genome Biol. 21:143     Reference: August 7th, 2020
Gene Product: September 14th, 2016
Variation: February 2nd, 2017
5 days agote1 terminal ear1: stalked ear appendages at tip; varying to infolded ears
3.05
   Sun, YH, et al. 2020. Genome Biol. 21:143     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Variation: July 24th, 2017
5 days agots1 tassel seed1: tassel pistillate and pendant; if removed, small ear with irregular kernel placement develops
2.04 - 2.05
   Sun, YH, et al. 2020. Genome Biol. 21:143     Reference: August 7th, 2020
Gene Product: January 3rd, 2018
Variation: September 5th, 2019
5 days agots2 tassel seed2: like ts1, but tassel branches variably pistillate and staminate; sequence homologous to short chain alcohol dehydrogenases; SSR phi001
1.03
   Sun, YH, et al. 2020. Genome Biol. 21:143     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
5 days agotu1 tunicate1: dominant Tu1 ears develop long glumes enclosing individual kernels; tassels develop large, coarse glumes and sex reversal; both inflorescences become grossly vegetative and sterile in homozygotes
4.08 - 4.08
GRMZM2G370777
Sun, YH, et al. 2020. Genome Biol. 21:143     Reference: August 7th, 2020
Gene Product: June 12th, 2012
Variation: February 3rd, 2011
Gene Model: May 9th, 2012
5 days agozim28 ZIM-transcription factor 28: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.02
GRMZM2G116614
Sun, YH, et al. 2020. Genome Biol. 21:143     Reference: August 7th, 2020
Variation: September 1st, 2003
Gene Model: December 6th, 2016
5 days agoub3 unbranched3: double mutant shows decrease in tassel branch number
 
   Sun, YH, et al. 2020. Genome Biol. 21:143     Reference: August 7th, 2020
Gene Product: July 5th, 2019
Variation: December 17th, 2014
5 days agofea4 fasciated ear4: Mutants are semidwarfed with fasciated ears and tassels as well as greatly enlarged vegetative and inflorescence meristems.
 
   Sun, YH, et al. 2020. Genome Biol. 21:143     Reference: August 7th, 2020
Gene Product: August 21st, 2018
Variation: July 7th, 2017
5 days agomha4 proton-exporting ATPase4:
10.07
GRMZM2G006894
Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Variation: December 14th, 2017
Gene Model: December 14th, 2017
5 days agotga1 teosinte glume architecture1: glumes indurated, erect, long, boat-shaped; factor transferred from teosinte
4.05
GRMZM2G101511
Sun, YH, et al. 2020. Genome Biol. 21:143     Reference: August 7th, 2020
Gene Product: July 5th, 2019
Variation: May 7th, 2015
Gene Model: October 28th, 2011
5 days agotip1 tonoplast intrinsic protein1: tip1 cDNA is 1097 bp long, including the 93 bp leader sequence. Its derived amino acid sequence has 76% identity with the tonoplast aquaporin from Arabidopsis.
10.04
GRMZM2G168439
Devi, MJ; Reddy, VR. 2020. Plant Physiol Biochem 154:714-722     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: February 5th, 2015
5 days agoelfa9 elongation factor 1-alpha9: shares 89-99% nucleotide sequence identity with genes elf1a to alf1g (aka clones eEF1Aa to eEF1Ag).
9.03
GRMZM2G153541
Castorina, G, et al. 2020. Plant Physiol. 0:doi: 10.1104/pp.20.00322     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Variation: April 14th, 2014
Gene Model: April 15th, 2014
5 days agopip2g plasma membrane intrinsic protein2:
 
   Devi, MJ; Reddy, VR. 2020. Plant Physiol Biochem 154:714-722     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
5 days agomha1 membrane H(+)-ATPase1: cDNA and genomic sequences similar to plant plasma membrane proton-translocating ATPase, major band in Southerns; partly contained in Bs-1 retroelement; SSR umc1207
2.09
GRMZM2G144821
Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Variation: February 20th, 2007
Gene Model: January 22nd, 2016
5 days agofdl1 fused leaves1: coleoptile-first or first-second leaves fused at epidermis, curly
7.04
GRMZM2G056407
Castorina, G, et al. 2020. Plant Physiol. 0:doi: 10.1104/pp.20.00322     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Variation: February 13th, 2020
Gene Model: September 12th, 2018
5 days agoaos1 allene oxide synthase1: expression induction by herbivory and methyl jasmonate
9.06
GRMZM2G067225
Sun, YH, et al. 2020. Genome Biol. 21:143     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Variation: September 24th, 2010
Gene Model: October 29th, 2015
5 days agomha3 membrane H(+)-ATPase3:
 
GRMZM2G104325
Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Variation: January 22nd, 2016
Gene Model: January 22nd, 2016
5 days agocct2 CO CO-LIKE TIMING OF CAB1 protein domain2: photoperiod response locus; confers later flowering in teosintes under longer day lengths; knockout mutant causes early flowering under long days
 
GRMZM2G004483
Sun, YH, et al. 2020. Genome Biol. 21:143     Reference: August 7th, 2020
Gene Product: June 18th, 2018
Variation: December 27th, 2017
Gene Model: December 27th, 2017
5 days agonsa1 Na+ content under saline-alkaline conditions1: involved in Na+ homeostasis; mutants promote root Na+ efflux
 
GRMZM2G000397
Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: January 10th, 2020
Variation: January 10th, 2020
Gene Model: January 10th, 2020
5 days agomha5 membrane H(+)-ATPase5:
 
GRMZM2G341058
Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2020
5 days agomha6 membrane H(+)-ATPase6:
 
GRMZM2G008122
Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2020
5 days agomha7 membrane H(+)-ATPase7:
 
GRMZM2G148374
Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2020
5 days agomha10 membrane H(+)-ATPase10:
 
GRMZM2G131309
Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2020
5 days agomha11 membrane H(+)-ATPase11:
 
GRMZM2G172183
Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2020
5 days agomha12 membrane H(+)-ATPase12:
 
GRMZM2G035520
Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2020
5 days agomha9 membrane H(+)-ATPase9:
 
AC209050.3_FG001
Cao, YB, et al. 2020. Nature communications. 11:186     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Gene Model: January 10th, 2020
5 days agoaos5 allene oxide synthesis5:
 
GRMZM2G033098
Sun, YH, et al. 2020. Genome Biol. 21:143     Reference: August 7th, 2020
Gene Product: September 1st, 2003
Gene Model: March 19th, 2020
6 days agolw1 lemon white1: white seedling, pale yellow endosperm; some alleles have zebra or luteus phenotypes
1.10
GRMZM2G027059
Mlotshwa, S et al. 2020. Plant Direct. doi: 10.1002/pld3.224     Reference: August 6th, 2020
Gene Product: June 20th, 2012
Variation: March 10th, 2016
Gene Model: January 8th, 2014
6 days agovp5 viviparous5: like vp2cDNA, strongest hybridization to this site; other sites are near o2, bnl17.25 and dup103; encodes a 2-step phytoene desaturase; SSR umc1070
1.02 - 1.02
   Mlotshwa, S et al. 2020. Plant Direct. doi: 10.1002/pld3.224     Reference: August 6th, 2020
Gene Product: December 13th, 2011
Variation: March 4th, 2014
6 days agoccha1 chloroplast-localized potential Ca2+/H+ antiporter1: encodes a chloroplast-localized Mn2+ or Ca2+ transporter
 
GRMZM2G464891
Wang, CJ et al. 2020. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2020.08.002   At1g64150 (TAIR) Reference: August 6th, 2020
Gene Product: August 6th, 2020
Variation: August 6th, 2020
Gene Model: August 6th, 2020
7 days agofat2 fatty acyl-ACP thioesterase2:
9.02
GRMZM5G829544
Li, L, et al. 2011. PLoS One. 6:e24699   AT1G08510 (TAIR) Reference: August 5th, 2020
Gene Product: May 23rd, 2012
Variation: May 23rd, 2012
Gene Model: May 23rd, 2012
Recommended by Lin Li:
May 24th, 2012
7 days agogst2 glutathione S-transferase2: safener-induced; heterodimer; 2 map sites have been reported on chr 8 and 10
10.03
GRMZM2G132093
Li, YS, et al. 2020. 11:881     Reference: August 5th, 2020
Gene Product: September 1st, 2003
Variation: July 7th, 2010
Gene Model: October 29th, 2015
7 days agoo10 opaque endosperm10: like o1
 
GRMZM2G346263
Yao, DS, et al. 2016. PLoS Genetics. 12:e1006270     Reference: August 5th, 2020
Gene Product: August 20th, 2016
Variation: August 20th, 2016
Gene Model: August 20th, 2016
7 days agopx3 peroxidase3: electrophoretic mobility, anodal; monomeric; widely distributed in tissues
7.05 - 7.06
GRMZM2G427815
Li, YS, et al. 2020. 11:881     Reference: August 5th, 2020
Gene Product: September 18th, 2015
Variation: August 11th, 2015
Gene Model: August 11th, 2015
7 days agotan1 tangled1: (was py1) leaves short, pointed, fine white streaks; displays abnormally oriented cell divisions and altered growth and development throughout the plant
6.05
   Martinez, P, et al. 2020. J Cell Biol. 219:e201907184     Reference: August 5th, 2020
Variation: June 29th, 2005
7 days agogst6 glutathione transferase6: cDNA, functionally expressed in E. coli
7.01
GRMZM2G129357
Li, YS, et al. 2020. 11:881     Reference: August 5th, 2020
Gene Product: September 1st, 2003
Variation: July 22nd, 2010
Gene Model: July 27th, 2016
7 days agogst7 glutathione transferase7: cDNA, functionally expressed in E. coli
3.05
GRMZM2G028556
Li, YS, et al. 2020. 11:881     Reference: August 5th, 2020
Gene Product: September 1st, 2003
Variation: August 9th, 2010
Gene Model: July 27th, 2016
7 days agoiaa11 Aux/IAA-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.04
GRMZM2G167794
Li, YS, et al. 2020. 11:881     Reference: August 5th, 2020
Variation: September 1st, 2003
Gene Model: April 2nd, 2018
7 days agomlks2 Maize LINC KASH AtSINE-like2: required for normal male meiosis and pollen development and normal stomatal complex development
 
GRMZM2G000608
Gumber, HK, et al. 2019. Nucleus. 10:144-166     Reference: August 5th, 2020
Gene Product: December 7th, 2019
Variation: June 22nd, 2019
Gene Model: June 7th, 2018
7 days agogst8 glutathione transferase8:
 
GRMZM2G156877
Li, YS, et al. 2020. 11:881     Reference: August 5th, 2020
Gene Product: September 1st, 2003
Gene Model: July 27th, 2016
7 days agogst24 glutathione transferase24:
5.07
GRMZM2G032856
Li, YS, et al. 2020. 11:881     Reference: August 5th, 2020
Gene Product: September 1st, 2003
Variation: August 20th, 2010
Gene Model: July 27th, 2016
7 days agogst25 glutathione transferase25:
9.08
GRMZM2G161905
Li, YS, et al. 2020. 11:881     Reference: August 5th, 2020
Gene Product: September 1st, 2003
Gene Model: July 27th, 2016
7 days agogst34 glutathione transferase34:
 
GRMZM2G145069
Li, YS, et al. 2020. 11:881     Reference: August 5th, 2020
Gene Product: September 1st, 2003
Gene Model: April 18th, 2017
7 days agohsftf11 HSF-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.11
GRMZM2G132971
Li, YS, et al. 2020. 11:881   AT2G26150 (TAIR) Reference: August 5th, 2020
Gene Product: May 15th, 2020
Gene Model: October 13th, 2017
7 days agoemb14 embryo defective 14: mutant has defective embryo; unlinked suppressor(s) give an albino seedling phenotype
 
GRMZM2G384293
Li, C-L; Shen, Y; Meeley, RB; McCarty, DR; Tan, BC. 2015. Plant J. 84:785-799   AT3G47450 (TAIR)
LOC_Os02g01440 (MSU/TIGR)
Reference: August 5th, 2020
Gene Product: July 5th, 2013
Variation: October 13th, 2015
Gene Model: July 1st, 2013
7 days agoga2ox3 gibberellin 2-oxidase3:
 
GRMZM2G022679
Li, YS, et al. 2020. 11:881     Reference: August 5th, 2020
Gene Product: October 27th, 2014
Gene Model: October 27th, 2014
7 days agoga20ox6 gibberellin 20-oxidase6:
 
GRMZM2G127232
Li, YS, et al. 2020. 11:881     Reference: August 5th, 2020
Gene Product: October 28th, 2014
Gene Model: July 6th, 2020
8 days agoder1 derlin1: endoplasmic reticulum-associated degradation protein
8.04
GRMZM2G117388
Kanodia, P et al. 2020. Plant Direct. doi: 10.1002/pld3.241     Reference: August 4th, 2020
Variation: June 11th, 2012
Gene Model: December 22nd, 2015
Recommended by Ed Coe:
May 1st, 2007
8 days agobip1 Binding protein homolog1: cDNA clone, protein body, putative molecular chaperone of hsp70 family
5.03
   Kanodia, P et al. 2020. Plant Direct. doi: 10.1002/pld3.241     Reference: August 4th, 2020
Gene Product: September 1st, 2003
Variation: October 30th, 2012
8 days agopdi1 protein disulfide isomerase1: single copy cDNA, SSR umc1550
4.03
GRMZM2G091481
Kanodia, P et al. 2020. Plant Direct. doi: 10.1002/pld3.241     Reference: August 4th, 2020
Gene Product: September 1st, 2003
Variation: December 23rd, 2015
Gene Model: October 23rd, 2013
8 days agopab2 polyA binding protein2:
 
GRMZM2G102829
Kanodia, P et al. 2020. Plant Direct. doi: 10.1002/pld3.241     Reference: August 4th, 2020
Gene Product: August 4th, 2020
Gene Model: August 4th, 2020
8 days agopdi13 protein disulfide isomerase13:
 
GRMZM2G376542
Kanodia, P et al. 2020. Plant Direct. doi: 10.1002/pld3.241     Reference: August 4th, 2020
Gene Product: September 1st, 2003
Gene Model: August 4th, 2020
8 days agoconr1 concentric ring1: mutants have a 'concentric ring' leaf lesion phenotype
2.04
GRMZM2G014695
Kim, SB et al. 2020. Plant J pp.doi: 10.1111/tpj.14945     Reference: August 4th, 2020
Variation: August 4th, 2020
Gene Model: March 15th, 2020
9 days agoad1 adherent1: seedling leaves, tassel branches, and occasionally top leaves adhere
1.08
GRMZM2G167438
Liu, X et al. 2020. New Phytol pp.doi: 10.1111/nph.16837     Reference: August 3rd, 2020
Gene Product: November 1st, 2018
Variation: February 13th, 2020
Gene Model: February 13th, 2020
9 days agogi2 gigantea2: homologous to Arabidopsis photoperiod gene gigantea.
3.03
GRMZM5G844173
Du, XM et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12849     Reference: August 3rd, 2020
Gene Product: September 19th, 2012
Variation: September 18th, 2012
Gene Model: September 18th, 2012
9 days agolfy1 leafy1: dominant Lfy1 plants have increased number of leaves above ear
 
   Du, XM et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12849     Reference: August 3rd, 2020
Variation: September 24th, 2015
9 days agossu2 ribulose bisphosphate carboxylase small subunit2: probed locus
2.05
GRMZM2G113033
Long, L et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa366     Reference: August 3rd, 2020
Gene Product: September 1st, 2003
Variation: October 14th, 2014
Gene Model: August 7th, 2014
9 days agolhcb6 light harvesting chlorophyll a/b binding protein6:
 
GRMZM2G092427
Long, L et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa366     Reference: August 3rd, 2020
Gene Product: January 8th, 2005
Variation: October 8th, 2010
Gene Model: October 9th, 2015
9 days agopsb3 photosystem II3:
4.04
GRMZM2G174984
Long, L et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa366     Reference: August 3rd, 2020
Variation: April 14th, 2015
Gene Model: April 14th, 2015
9 days agokcs15 3-ketoacyl-CoA synthase15: NCBI: fatty acid elongase
1.08
GRMZM2G162508
Liu, X et al. 2020. New Phytol pp.doi: 10.1111/nph.16837     Reference: August 3rd, 2020
Gene Product: November 1st, 2018
Variation: November 4th, 2016
Gene Model: November 4th, 2016
9 days agozmm15 Zea mays MADS-box 15:
5.01
GRMZM2G553379
Du, XM et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12849     Reference: August 3rd, 2020
Variation: June 15th, 2018
Gene Model: June 15th, 2018
9 days agopsbB (cp)  :
 
GRMZM5G808939
Long, L et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa366     Reference: August 3rd, 2020
Gene Product: September 1st, 2003
Gene Model: June 16th, 2020
9 days agodlf1 delayed flowering1: tall late plant with additional nodes and leaves at flowering; no apparent response to day length
 
   Du, XM et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12849     Reference: August 3rd, 2020
Gene Product: August 21st, 2018
Variation: June 25th, 2020
9 days agopsa6 photosystem I reaction center6: leaf cDNA csu67, similar to barley photosystem I subunit
7.01
GRMZM2G012397
Long, L et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa366     Reference: August 3rd, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: January 8th, 2015
9 days agoploc1 plastocyanin homolog1: leaf cDNA csu257, similar to plastocyanin
6.01
GRMZM2G071450
Long, L et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa366     Reference: August 3rd, 2020
Gene Product: September 1st, 2003
Variation: August 18th, 2018
Gene Model: August 19th, 2018
9 days agooec17 oxygen evolving complex, 17kDa homolog: leaf cDNA csu229 similar to plant oxygen evolving complex polypeptide
7.03
GRMZM2G058070
Long, L et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa366     Reference: August 3rd, 2020
Gene Product: September 1st, 2003
Variation: July 18th, 2012
Gene Model: September 11th, 2018
9 days agofkf2 flavin-binding kelch repeat f-box2: Involved in regulating the circadian clock and photoperiodic flowering
 
GRMZM2G106363
Du, XM et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12849     Reference: August 3rd, 2020
Gene Product: July 25th, 2017
Gene Model: December 12th, 2017
9 days agokcs16 3-ketoacyl-CoA synthase16:
 
GRMZM2G160417
Liu, X et al. 2020. New Phytol pp.doi: 10.1111/nph.16837     Reference: August 3rd, 2020
Gene Product: November 1st, 2018
Gene Model: February 13th, 2020
9 days agopspb2 photosystem II oxygen evolving polypeptide2: sequence highly similar to OEC23 oxygen evolving complex protein of photosystem II; located peripheral to lumenal side of thylakoid (Huang et al 2013)
7.01
GRMZM2G047954
Long, L et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa366     Reference: August 3rd, 2020
Gene Product: September 1st, 2003
Variation: March 31st, 2005
Gene Model: January 30th, 2019
9 days agolhcb5 light harvesting chlorophyll a/b binding protein5:
2.08
GRMZM2G149428
Long, L et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa366     Reference: August 3rd, 2020
Variation: February 19th, 2015
Gene Model: February 19th, 2015
11 days agoczog2 cis-zeatin O-glucosyltransferase2: enzymatic activity like that of czog1 but high in roots and low in kernels; 97.8% identity at amino acid level
8.07
GRMZM2G110511
Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: March 20th, 2014
Variation: March 25th, 2009
Gene Model: March 21st, 2014
Recommended by Marty Sachs:
March 7th, 2007
11 days agorrb3 retinoblastoma family3:
 
GRMZM2G033828
Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Variation: January 26th, 2011
Gene Model: April 17th, 2015
11 days agodek1 defective kernel1: germless; colorless (mosaic) aleurone; floury white endosperm; anthocyanins and carotenoids absent; cultured embryos not obtained (aka clf1, gay1)
1.03
   Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: September 1st, 2003
Variation: September 8th, 2018
11 days agodhn1 dehydrin1: protein induced by abscisic acid; cDNA sequence agrees with amino acid sequence (aka dhn3, rab17, rny1)
6.05
   Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: September 1st, 2003
Variation: November 20th, 2012
11 days agohb75 Homeobox-transcription factor 75: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.02
GRMZM2G001289
Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Variation: September 1st, 2003
Gene Model: February 6th, 2018
11 days agodof3 DNA binding with one finger3: cDNA sequence distinct from dof1, dof2
6.01
GRMZM2G179069
Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: September 1st, 2003
Variation: April 18th, 2008
Gene Model: August 29th, 2013
11 days agocr4 crinkly4: crinkly seedling leaves; plants short with rough, sometimes knot-bearing, extremely crinkly leaves and club tassel; aleurone mosaic
10.02
   Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: September 1st, 2003
Variation: July 17th, 2006
11 days agothk1 thick aleurone1: Mutants have a thick aleurone phenotype; encodes a NOT1 subunit of the CCR4-NOT complex
 
   Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: August 1st, 2020
Variation: August 1st, 2020
11 days agotubtf8 TUB-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: September 29th, 2015
11 days agoocl4 outer cell layer4:
1.05 - 1.06
   Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: September 1st, 2003
Variation: December 6th, 2019
11 days agoczog1 cis-zeatin O-glucosyltransferase1: gene intronless, genomic and cDNA sequences identical (Martin et al., 2001 PNAS 98:5922); expression high in roots and kernels (compare czog2).
2.03
GRMZM2G168474
Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: March 20th, 2014
Variation: October 25th, 2012
Gene Model: March 20th, 2014
11 days agonkd2 naked endosperm2: double mutants have multiple (2-5) layers of peripheral endosperm cells that lack starch granules or other features of starchy endosperm
10.06
GRMZM5G884137
Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: January 3rd, 2015
Variation: December 21st, 2017
Gene Model: December 21st, 2017
11 days agosal1 supernumerary aleurone1: Mutant allele contains up to seven layers of aleurone cells
9.03
   Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Variation: April 3rd, 2007
11 days agomkkk16 MAP kinase kinase kinase16: Function inferred from sequence similarity (Kong 2013)
2.06
GRMZM2G098828
Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: July 10th, 2013
Gene Model: July 11th, 2013
11 days agode18 defective18: Defective kernel: seed weight less than half of normal (B37) (Torti et al. 1984)
10.03
GRMZM2G091819
Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: June 18th, 2018
Variation: January 21st, 2016
Gene Model: September 11th, 2012
11 days agonkd1 naked endosperm1: double mutants have multiple (2-5) layers of peripheral endosperm cells that lack starch granules or other features of starchy endosperm
 
GRMZM2G129261
Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: January 3rd, 2015
Variation: January 3rd, 2015
Gene Model: January 2nd, 2015
11 days agocsld1 cellulose synthase-like D1: participates in cell wall polysaccharides formation during cell division; mutants have narrow leaves
 
GRMZM2G015886
Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: October 7th, 2016
Variation: October 18th, 2018
Gene Model: October 18th, 2018
11 days agothkl1 thick aleurone-like1: likely accounts for the ability of thk1 mutants to form viable cells
 
GRMZM5G827026
Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: August 1st, 2020
Gene Model: August 1st, 2020
11 days agocadtfr12 CCAAT-DR1-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
9.03
GRMZM2G167576
Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Gene Product: August 9th, 2016
Gene Model: August 8th, 2016
11 days agocdc201 cell division cycle201:
4.06
GRMZM2G063192
Wu, H et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00703     Reference: August 1st, 2020
Variation: March 31st, 2005
Gene Model: November 18th, 2016
13 days agosmr5 siamese-related5:
9.08 - 9.08
GRMZM2G413337
Zhang, ZQ et al. 2020. BMC Evolutionary Biology 20:91     Reference: July 30th, 2020
Gene Product: March 8th, 2017
Variation: September 1st, 2003
Gene Model: June 27th, 2020
13 days agoumc1671  :
7.05
GRMZM2G041328
    Variation: September 1st, 2003
Gene Model: July 30th, 2020
13 days agosmr4 siamese-related4:
 
GRMZM2G019353
Zhang, ZQ et al. 2020. BMC Evolutionary Biology 20:91     Reference: July 30th, 2020
Gene Product: March 8th, 2017
Gene Model: March 14th, 2018
13 days agosmr1 siamese-related1:
 
GRMZM2G013463
Zhang, ZQ et al. 2020. BMC Evolutionary Biology 20:91     Reference: July 30th, 2020
Gene Product: March 8th, 2017
Gene Model: July 30th, 2020
13 days agosmr2 siamese-related2: may have been primarily responsible for the endoreplication regulation of outer endosperm or aleurone cells
 
GRMZM2G144024
Zhang, ZQ et al. 2020. BMC Evolutionary Biology 20:91     Reference: July 30th, 2020
Gene Product: March 8th, 2017
Gene Model: July 30th, 2020
13 days agosmr3 siamese-related3:
 
GRMZM2G331766
Zhang, ZQ et al. 2020. BMC Evolutionary Biology 20:91     Reference: July 30th, 2020
Gene Product: March 8th, 2017
Gene Model: July 30th, 2020
13 days agosmr6 siamese-related6:
 
GRMZM2G090029
Zhang, ZQ et al. 2020. BMC Evolutionary Biology 20:91     Reference: July 30th, 2020
Gene Product: March 8th, 2017
Gene Model: July 30th, 2020
13 days agosmr7 siamese-related7:
 
GRMZM2G004898
Zhang, ZQ et al. 2020. BMC Evolutionary Biology 20:91     Reference: July 30th, 2020
Gene Product: March 8th, 2017
Gene Model: July 30th, 2020
13 days agosmr9 siamese-related9: may have regulated the initiation of endoreplication in endosperm central cells
 
GRMZM2G337190
Zhang, ZQ et al. 2020. BMC Evolutionary Biology 20:91     Reference: July 30th, 2020
Gene Product: March 8th, 2017
Gene Model: July 30th, 2020
13 days agosmr10 siamese-related10: may have been primarily responsible for the endoreplication regulation of outer endosperm or aleurone cells
 
GRMZM2G493549
Zhang, ZQ et al. 2020. BMC Evolutionary Biology 20:91     Reference: July 30th, 2020
Gene Product: March 8th, 2017
Gene Model: July 30th, 2020
13 days agosmr11 siamese-related11: may have regulated the initiation of endoreplication in endosperm central cells
 
GRMZM2G140032
Zhang, ZQ et al. 2020. BMC Evolutionary Biology 20:91     Reference: July 30th, 2020
Gene Product: March 8th, 2017
Gene Model: July 30th, 2020
13 days agosmr12 siamese-related12: may have regulated the initiation of endoreplication in endosperm central cells
 
GRMZM2G388297
Zhang, ZQ et al. 2020. BMC Evolutionary Biology 20:91     Reference: July 30th, 2020
Gene Product: March 8th, 2017
Gene Model: July 30th, 2020
13 days agopco129709  :
7.06
GRMZM2G140758
    Variation: September 25th, 2007
Gene Model: July 30th, 2020
13 days agosmr8 siamese-related8:
6.02
GRMZM5G897944
Zhang, ZQ et al. 2020. BMC Evolutionary Biology 20:91     Reference: July 30th, 2020
Gene Product: March 8th, 2017
Variation: March 31st, 2005
Gene Model: January 17th, 2020
14 days agothx43 Trihelix-transcription factor 43:
10.03
GRMZM2G110145
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 29th, 2020
Variation: September 1st, 2003
Gene Model: December 9th, 2017
14 days agothx21 Trihelix-transcription factor 21: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
14 days agothx1 Trihelix-transcription factor 1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
14 days agothx10 Trihelix-transcription factor 10: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
14 days agothx12 Trihelix-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
14 days agothx13 Trihelix-transcription factor 13: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.NCBI 103626744 is similar to RNA-metabolising metallo-beta-lactamase family protein of A. thaliana
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
14 days agothx14 Trihelix-transcription factor 14: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
14 days agothx15 Trihelix-transcription factor 15: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
14 days agothx16 Trihelix-transcription factor 16: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
14 days agothx17 Trihelix-transcription factor 17: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
14 days agothx18 Trihelix-transcription factor 18: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
14 days agothx19 Trihelix-transcription factor 19: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
14 days agothx2 Trihelix-transcription factor 2: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
14 days agothx20 Trihelix-transcription factor 20: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to protein GT-2-like 1 of A. thaliana
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
14 days agothx22 Trihelix-transcription factor 22: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
14 days agothx23 Trihelix-transcription factor 23: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
14 days agothx24 Trihelix-transcription factor 24: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
14 days agothx25 Trihelix-transcription factor 25: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
14 days agothx26 Trihelix-transcription factor 26: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. This locus shares some 40% sequence similarity to aspartate/glutamate/uridylate kinase-like protein of A. thaliana, and where the function of the A. thaliana protein was assigned based on sequence similarity to another species. (Dec 2019 Updated)
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
14 days agothx27 Trihelix-transcription factor 27: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
14 days agothx28 Trihelix-transcription factor 28: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
14 days agothx29 Trihelix-transcription factor 29: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
14 days agothx3 Trihelix-transcription factor 3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
14 days agothx4 Trihelix-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
14 days agothx5 Trihelix-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 29th, 2020
14 days agothx6 Trihelix-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 29th, 2020
14 days agothx7 Trihelix-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to sequence-specific DNA binding transcription factor of A. thaliana
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 29th, 2020
14 days agothx8 Trihelix-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 29th, 2020
14 days agothx9 Trihelix-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 29th, 2020
14 days agothx11 Trihelix-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models (in this case GRMZM2G103315).
4.09
GRMZM2G091258
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 29th, 2020
Gene Model: August 7th, 2019
14 days agothx30 Trihelix-transcription factor 30:
 
GRMZM2G031493
Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
Gene Model: August 7th, 2019
14 days agothx31 Trihelix-transcription factor 31: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G427087
Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
Gene Model: August 7th, 2019
14 days agothx32 Trihelix-transcription factor 32: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G320827
Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
Gene Model: August 7th, 2019
14 days agothx33 Trihelix-transcription factor 33: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G149590
Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
Gene Model: August 7th, 2019
14 days agothx34 Trihelix-transcription factor 34: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G162840
Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
Gene Model: August 7th, 2019
14 days agothx35 Trihelix-transcription factor 35: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G081445
Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
Gene Model: August 7th, 2019
14 days agothx36 Trihelix-transcription factor 36: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G476752
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 29th, 2020
Gene Model: August 7th, 2019
14 days agothx37 Trihelix-transcription factor 37: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G334722
Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
Gene Model: August 7th, 2019
14 days agothx38 Trihelix-transcription factor 38: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G126148
Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
Gene Model: August 7th, 2019
14 days agothx39 Trihelix-transcription factor 39: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G301122
Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
Gene Model: August 7th, 2019
14 days agothx40 Trihelix-transcription factor 40: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G469873
Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
Gene Model: August 7th, 2019
14 days agothx41 Trihelix-transcription factor 41: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM5G818655
Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
Gene Model: August 7th, 2019
14 days agothx42 Trihelix-transcription factor 42: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G037823
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 29th, 2020
Gene Model: August 7th, 2019
14 days agothx44 Trihelix-transcription factor 44: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G122277
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 29th, 2020
Gene Model: August 7th, 2019
14 days agothx45 Trihelix-transcription factor 45:
 
GRMZM2G084684
Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
Gene Model: July 29th, 2020
14 days agothx46 Trihelix-transcription factor 46:
 
GRMZM2G153575
Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
Gene Model: July 29th, 2020
14 days agothx47 Trihelix-transcription factor 47:
 
GRMZM2G305362
Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
Gene Model: July 29th, 2020
14 days agothx48 Trihelix-transcription factor 48:
 
GRMZM2G375307
Jiang, L et al. 2020. Int J Agric Biol 23:863-868     Reference: July 29th, 2020
Gene Product: July 29th, 2020
Gene Model: July 29th, 2020
14 days agopco077498  :
7.04
GRMZM2G577405
    Variation: September 25th, 2007
Gene Model: July 29th, 2020
15 days agod1 dwarf plant1: andromonoecious, short, compact plants; responds to gibberellins; d1-t intermediate in height
3.03
GRMZM2G036340
Lin, JW et al. 2020. Euphytica 216:132     Reference: July 28th, 2020
Gene Product: October 25th, 2014
Variation: October 30th, 2014
Gene Model: October 2nd, 2012
15 days agoumc1543  :
7.04
GRMZM5G898305
    Variation: September 1st, 2003
Gene Model: July 28th, 2020
15 days agobhlh88 bHLH-transcription factor 88: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Lin, JW et al. 2020. Euphytica 216:132     Reference: July 28th, 2020
Gene Product: September 14th, 2016
15 days agocaf2 crs2 associated factor2: CRS2-associated factor 2; CRM domain chloroplast RNA binding protein. Interacts with CRS2, promotes splicing of several chloroplast group II introns and binds to those introns in vivo. (A. Barkan, 2015)ivory colored leaf, seedling lethal; RNA splicing
3.04
AC199526.5_FG003
Lin, JW et al. 2020. Euphytica 216:132   AT1G23400 (TAIR)
LOC_Os01g21990 (MSU/TIGR)
Os01g0323300 (Gramene)
Reference: July 28th, 2020
Gene Product: July 23rd, 2009
Variation: July 22nd, 2009
Gene Model: July 14th, 2011
16 days agodek10 defective kernel10: collapsed endosperm; lethal; cultured embryos green, curled, stubby; encodes a E-subgroup PPR protein
4.06 - 4.11
GRMZM2G087226
Dai, DW et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa348     Reference: July 27th, 2020
Gene Product: December 27th, 2016
Variation: February 20th, 2017
Gene Model: February 20th, 2017
16 days agodek19 defective kernel19: collapsed opaque endosperm; lethal; cultured embryos green
6.01 - 6.08
GRMZM2G111984
Dai, DW et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa348     Reference: July 27th, 2020
Gene Product: December 27th, 2016
Variation: November 13th, 2018
Gene Model: November 13th, 2018
16 days agopep1 phosphoenolpyruvate carboxylase1: cytosolic C4 isozyme; single copy, similar to C3-PEPCase genes; cDNA complements E. coli mutant; genomic and partial amino acid sequences compare; SSR phi065
9.03
   Zamani-Nour, S et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa343     Reference: July 27th, 2020
Gene Product: September 1st, 2003
Variation: May 27th, 2020
16 days agogrp2 glycine-rich protein2:
10.03
GRMZM2G009448
Dai, DW et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa348     Reference: July 27th, 2020
Gene Product: September 1st, 2003
Variation: June 5th, 2014
Gene Model: May 27th, 2015
16 days agonactf108 NAC-transcription factor 108: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.functions as a negative regulator of the stay‐green trait
 
   Shan, T et al. 2020. Russ J Genet 56:835-842     Reference: July 27th, 2020
Gene Product: July 8th, 2019
Variation: May 4th, 2019
16 days agoaox1 alternative oxidase1 : primers give PCR product closely similar to alternative oxidase in other species
2.02
AC233960.1_FG002
Dai, DW et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa348     Reference: July 27th, 2020
Gene Product: February 22nd, 2012
Variation: February 22nd, 2012
Gene Model: February 17th, 2012
16 days agotor1 target of rapamycin1: similar to Arabidpsis FKBP12-rapamycin complex-associated proteinexpression is highly regulated during germination
6.05
GRMZM2G049342
Diaz-Granados, VH et al. 2020. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2020.07.041     Reference: July 27th, 2020
Gene Product: November 21st, 2017
Gene Model: August 27th, 2018
16 days agocyc14 cyclin14: NCBI: cyclin-D4-2-like
1.07
GRMZM2G133413
Diaz-Granados, VH et al. 2020. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2020.07.041     Reference: July 27th, 2020
Gene Product: June 26th, 2009
Variation: January 19th, 2017
Gene Model: January 19th, 2017
16 days agocdc2 cell division control protein homolog2: cDNA sequence homologous to cdc2/cdc28 subfamily of serine/threonine protein kinases, complements yeast cdc28
1.01
GRMZM2G008327
Diaz-Granados, VH et al. 2020. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2020.07.041     Reference: July 27th, 2020
Gene Product: December 29th, 2016
Variation: April 23rd, 2010
Gene Model: March 30th, 2015
16 days agoaox2 alternative oxidase2: primers give PCR product closely similar to alternative oxidase in other species
 
GRMZM2G125669
Dai, DW et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa348     Reference: July 27th, 2020
Gene Product: February 22nd, 2012
Variation: March 1st, 2012
Gene Model: February 17th, 2012
16 days agoaox3 alternative oxidase3:
 
GRMZM2G074743
Dai, DW et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa348     Reference: July 27th, 2020
Gene Product: February 22nd, 2012
Gene Model: February 17th, 2012
16 days agodct1 dicarboxylic acid transporter1: plastid transporter, specific to mesophyll cells (Taniguchi et al 2004)
 
GRMZM2G040933
Zamani-Nour, S et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa343     Reference: July 27th, 2020
Gene Product: August 18th, 2014
Gene Model: August 18th, 2014
16 days agocyc11 cyclin11: Associates to cyclin dependent kinase proteins during germination and the complexes formed develop kinase activity.
 
GRMZM2G161382
Diaz-Granados, VH et al. 2020. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2020.07.041     Reference: July 27th, 2020
Gene Product: June 26th, 2009
Gene Model: December 21st, 2016
16 days agocki3 cyclin-dependent kinase inhibitor3:
 
GRMZM2G157510
Diaz-Granados, VH et al. 2020. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2020.07.041     Reference: July 27th, 2020
Gene Product: March 8th, 2017
Variation: May 4th, 2017
Gene Model: March 7th, 2017
16 days agocki8 cyclin-dependent kinase inhibitor8:
 
GRMZM2G154414
Diaz-Granados, VH et al. 2020. Plant Physiol Biochem pp.doi: 10.1016/j.plaphy.2020.07.041     Reference: July 27th, 2020
Gene Product: March 8th, 2017
Gene Model: March 7th, 2017
16 days agoppr170 pentatricopeptide repeat protein170: mutants have a defective/collapsed kernel phenotype
 
GRMZM2G480380
Dai, DW et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa348     Reference: July 27th, 2020
Gene Product: December 27th, 2016
Variation: July 27th, 2020
Gene Model: July 27th, 2020
16 days agoorrm4 organelle RRM protein4:
 
GRMZM2G131167
Dai, DW et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa348     Reference: July 27th, 2020
Gene Product: April 11th, 2013
Gene Model: July 27th, 2020
16 days agoorrm1 organelle RRM protein1: ORRM-domain protein, involved in chloroplast RNA editing. (A. Barkan, 2015)encodes an essential plastid editing factor
5.06
GRMZM5G899787
Dai, DW et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa348     Reference: July 27th, 2020
Gene Product: April 11th, 2013
Variation: April 12th, 2013
Gene Model: April 11th, 2013
16 days agooxmt1 oxo-glutarate/malate transporter1: single copy, plastid tranporter specific to mesophyll cells (Taniguchi et al 2004)
 
GRMZM2G383088
Zamani-Nour, S et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa343     Reference: July 27th, 2020
Gene Product: August 18th, 2014
Gene Model: August 18th, 2014
16 days agomorf8 multiple organelle RNA editing factor8:
9.07
GRMZM2G169384
Dai, DW et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa348     Reference: July 27th, 2020
Variation: March 31st, 2005
Gene Model: January 24th, 2019
17 days agobrd103  :
7.03
GRMZM2G040079
    Variation: September 1st, 2003
Gene Model: July 26th, 2020
18 days agoumc1456  :
7.03
GRMZM2G004990
    Variation: September 1st, 2003
Gene Model: July 25th, 2020
18 days agopco123006  :
7.02
GRMZM5G843748
    Variation: September 25th, 2007
Gene Model: July 25th, 2020
20 days agomc1 mucronate1: dominant Mc1 kernels have opaque endospermendosperm-specific protein cDNA
2.06
GRMZM2G060429
Li, CB et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00352     Reference: July 23rd, 2020
Gene Product: September 17th, 2010
Variation: September 16th, 2010
Gene Model: August 4th, 2018
20 days agoo2 opaque endosperm2: like o1; high lysine content; regulates b-32 protein (see rip1); reduced lysine degradation (lysine-ketoglutaric reductase); SSRs phi057, 112
7.01
   Li, CB et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00352     Reference: July 23rd, 2020
Gene Product: September 1st, 2003
Variation: June 6th, 2016
20 days agodzs10 delta zein structural10: [was Zps10/(22)]; high (22.5%) methionine 10kDa delta zein; RFLP (probe 10kZ-1)
9.03 - 9.03
   Li, CB et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00352     Reference: July 23rd, 2020
Gene Product: September 1st, 2003
Variation: November 21st, 2012
20 days agoubi1 ubiquitin1: genomic sequence, 7 contiguous direct ubiquitin repeats; transcript specific probe; promoter active in monocots, not in tobacco
 
GRMZM2G409726
Li, CB et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00352     Reference: July 23rd, 2020
Gene Product: September 1st, 2003
Variation: November 20th, 2014
Gene Model: November 18th, 2014
20 days agocptk1 chloroplast thymidine kinase1: Mutants have aberrant chloroplast DNA metabolism. Alice Barkan, 2011
 
GRMZM2G048821
Najera-Martinez, M et al. 2020. Plants 9:930     Reference: July 23rd, 2020
Variation: October 11th, 2018
Gene Model: September 6th, 2011
20 days agozp15 zein protein, 15kDa15: high methionine; genomic blot indicates one or two copies
6.01 - 6.02
GRMZM2G086294
Li, CB et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00352     Reference: July 23rd, 2020
Gene Product: July 8th, 2013
Variation: August 27th, 2013
Gene Model: July 8th, 2013
20 days agozp27 27-kDa zein protein: proline rich; least abundant of zeins in endosperm, not clear if all in zp27 cluster
7.02
   Li, CB et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00352     Reference: July 23rd, 2020
Gene Product: September 17th, 2010
Variation: December 10th, 2019
20 days agode30 defective endosperm B30: dominant De*-B30 has opaque, high lysine endosperm
7.01 - 7.02
AF546188.1_FG007
Li, CB et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00352     Reference: July 23rd, 2020
Gene Product: September 1st, 2003
Variation: September 15th, 2014
Gene Model: September 14th, 2014
20 days agoimp1 importin1: leaf cDNA csu244 similar to importin
8.03
   Li, CB et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00352     Reference: July 23rd, 2020
Gene Product: September 1st, 2003
Variation: July 7th, 2017
20 days agogz50 50kD gamma zein: endosperm-specific protein cDNA
7.02
GRMZM2G138689
Li, CB et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00352     Reference: July 23rd, 2020
Gene Product: September 22nd, 2010
Variation: September 16th, 2010
Gene Model: November 21st, 2014
20 days agoaz22z3 22kD alpha zein3: mRNA for 22kD zein; in z1c(zp22) cluster
4.01
GRMZM2G044625
Li, CB et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00352     Reference: July 23rd, 2020
Gene Product: September 1st, 2003
Variation: May 31st, 2010
Gene Model: November 21st, 2014
20 days agosnrk1a2 SNF1-related kinase alpha1-like2:
 
GRMZM2G180704
Li, CB et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00352     Reference: July 23rd, 2020
Gene Product: December 31st, 2018
Gene Model: February 13th, 2014
20 days agozp2 zein protein2: encodes a 19 kD alpha zein
 
AF546188.1_FG005
Li, CB et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00352     Reference: July 23rd, 2020
Gene Product: September 1st, 2003
Gene Model: August 1st, 2016
20 days agorfwd3 ring finger and WD40 repeat3: mutants decrease zein transcription and seed nutrient reserves
 
GRMZM2G085691
Li, CB et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00352     Reference: July 23rd, 2020
Gene Product: March 26th, 2020
Variation: July 23rd, 2020
Gene Model: July 23rd, 2020
21 days agocko2 cytokinin oxidase 2:
3.05
GRMZM2G050997
Yao, QL; Di, S-Z. 2020. Intl J Agric Biol 23:475-483     Reference: July 22nd, 2020
Gene Product: April 4th, 2014
Variation: February 26th, 2008
Gene Model: March 21st, 2014
Recommended by Ed Coe:
January 8th, 2008
21 days agouaz7c01c10  :
 
GRMZM2G003038
    Variation: September 1st, 2003
Gene Model: July 22nd, 2020
21 days agohsftf19 HSF-transcription factor 19: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Yao, QL; Di, S-Z. 2020. Intl J Agric Biol 23:475-483     Reference: July 22nd, 2020
Gene Product: May 15th, 2020
21 days agolac1 laccase1:
 
GRMZM2G400390
Yao, QL; Di, S-Z. 2020. Intl J Agric Biol 23:475-483     Reference: July 22nd, 2020
Gene Product: March 31st, 2018
Gene Model: March 31st, 2018
21 days agodek46 defective kernel46: mutant kernels are small with shrunken pericarps after maturation
 
GRMZM2G456114
Xu, CH et al. 2020. Plant J pp.doi: 10.1111/tpj.14862     Reference: July 22nd, 2020
Gene Product: December 27th, 2016
Variation: June 22nd, 2020
Gene Model: June 20th, 2020
21 days agoalt12 alanine aminotransferase12: heat responsive gene
 
GRMZM5G828630
Yao, QL; Di, S-Z. 2020. Intl J Agric Biol 23:475-483     Reference: July 22nd, 2020
Gene Product: September 1st, 2003
Gene Model: July 22nd, 2020
22 days agocsu996  :
7.04
GRMZM2G047592
Baysdorfer, C. 1996. Nucleotide sequence submission to dbEST     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: July 21st, 2020
22 days agobt2 brittle endosperm2: like bt1; endosperm ADPG pyrophosphorylase subunit; with sh2 complements E. coli glgC
4.05
   Zang, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa332     Reference: July 21st, 2020
Gene Product: November 4th, 2014
Variation: December 4th, 2018
22 days agofl2 floury2: endosperm opaque, soft; dosage effect; encodes an abnormal 24kDa alpha-zein, blocked in removal of its signal peptide, preventing transfer to lumen of the endoplasmic reticulummRNA for 22kD zein; in z1c(zp22) cluster
4.03
GRMZM2G397687
Zang, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa332     Reference: July 21st, 2020
Gene Product: September 1st, 2003
Variation: October 17th, 2014
Gene Model: December 19th, 2011
22 days agosh1 shrunken1: inflated endosperm collapses on drying, forming smoothly indented kernels; sucrose synthase-sh1 of endosperm (compare sus1 and sus2); homotetramer; SSRs phi028, 044, 033
9.01
   Zang, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa332     Reference: July 21st, 2020
Gene Product: October 25th, 2006
Variation: June 9th, 2020
22 days agowx1 waxy1: amylopectin (stained red by iodine) replaces amylose (blue staining) in endosperm and pollen; extensive allelic series; application: highly branched starch has gelling properties, used for food gels, adhesives, and other industrial purposes; SSRs phi022, 027, 061NCBI: granule-bound starch synthase 1, chloroplastic/amyloplastic
9.03
   Zang, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa332     Reference: July 21st, 2020
Gene Product: June 4th, 2008
Variation: May 27th, 2020
22 days agoys1 yellow stripe1: yellow tissue between leaf veins, reflects iron deficiency symptoms; defect in Fe-phytosiderophore uptake
5.05 - 5.06
   Zang, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa332     Reference: July 21st, 2020
Gene Product: September 1st, 2003
Variation: March 9th, 2018
22 days agozpl2a zein polypeptidesL2a: zein protein characterized by electrophoretic mobility on isoelectric focusing gels. Maps near orp1
4.08
GRMZM2G404459
Zang, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa332     Reference: July 21st, 2020
Gene Product: September 1st, 2003
Variation: January 14th, 2015
Gene Model: January 14th, 2015
22 days agoumc1549a  :
7.02
GRMZM2G375667
    Variation: September 1st, 2003
Gene Model: July 21st, 2020
22 days agozmm14 Zea mays MADS14: during spikelet development zmm4 probably works as a selector gene which is involved in distinguishing the upper and lower floret
1.02
GRMZM2G099522
Li, T et al. 2020. Front Genet doi: 10.3389/fgene.2020.00747     Reference: July 21st, 2020
Variation: August 28th, 2013
Gene Model: August 14th, 2017
22 days agowrky79 WRKY-transcription factor 79: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.regulates phytoalexin biosynthetic gene expression
 
GRMZM2G061408
Fu, JY et al. 2017. J Exp Bot pp.doi; 10.1093/jxb/erx436     Reference: December 22nd, 2017
Gene Product: July 24th, 2017
Gene Model: July 21st, 2020
22 days agozip5 zinc-regulated, iron-regulated transporter-like protein5:
6.04
GRMZM2G064382
Zang, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa332     Reference: July 21st, 2020
Gene Product: June 5th, 2019
Variation: September 1st, 2003
Gene Model: August 25th, 2018
22 days agoaz19D2 alpha zein 19kDa D2: member of a two-gene family, z1D, closely linked
1.05
AF546187.1_FG007
Zang, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa332     Reference: July 21st, 2020
Gene Product: September 1st, 2003
Gene Model: November 21st, 2014
22 days agoifa1 indeterminate floral apex1: mutants have perturbed floral and inflorescence meristems as well as droopy leaves with increased angle
 
GRMZM2G088309
Li, T et al. 2020. Front Genet doi: 10.3389/fgene.2020.00747   AT1G69180 (TAIR)
LOC_Os03g11600 (MSU/TIGR)
Reference: July 21st, 2020
Gene Product: October 16th, 2015
Variation: July 13th, 2017
Gene Model: October 16th, 2015
22 days agozp3 zein protein3: encodes a 22 kD alpha zein
 
GRMZM2G160739
Zang, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa332     Reference: July 21st, 2020
Gene Product: September 1st, 2003
Gene Model: August 1st, 2016
22 days agozip3 zinc-regulated, iron-regulated transporter-like protein3:
 
GRMZM2G045849
Zang, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa332     Reference: July 21st, 2020
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
22 days agozip8 zinc-regulated, iron-regulated transporter-like protein8:
 
GRMZM2G093276
Zang, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa332     Reference: July 21st, 2020
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
22 days agoz1A-3 alpha zein 19kDa A-3:
 
GRMZM2G059620
Zang, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa332     Reference: July 21st, 2020
Gene Product: September 1st, 2003
Gene Model: July 3rd, 2019
22 days agoysl1 yellow stripe-like transporter1:
 
GRMZM2G051179
Zang, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa332     Reference: July 21st, 2020
Gene Product: September 1st, 2003
Gene Model: July 8th, 2020
22 days agoysl3 yellow stripe-like transporter3:
 
GRMZM2G026391
Zang, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa332     Reference: July 21st, 2020
Gene Product: September 1st, 2003
Gene Model: July 8th, 2020
22 days agoysl2 yellow stripe-like transporter2: mutants have small/collapsed kernels
 
GRMZM2G135291
Zang, J et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa332     Reference: July 21st, 2020
Gene Product: September 1st, 2003
Variation: July 21st, 2020
Gene Model: July 9th, 2020
23 days agoccp2 cysteine protease2: mRNA differentially enhanced in late- vs. early-senescing lines; similarity to rice oryzain gamma (cysteine protease) and castor bean vacuolar processing enzyme
7.02
   Liu, N et al. 2020. Mol Breed 40:71     Reference: July 20th, 2020
Gene Product: May 23rd, 2019
Variation: July 30th, 2011
23 days agovp8 viviparous8: embryo fails to become dormant; chlorophyll and carotenoids unaffected; small, pointed-leaf seedlings
1.11
   Luck, K et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01037-4     Reference: July 20th, 2020
Gene Product: November 29th, 2012
Variation: June 4th, 2018
23 days agotps8 terpene synthase8:
1.04 - 1.04
GRMZM2G038153
Luck, K et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01037-4     Reference: July 20th, 2020
Variation: May 29th, 2012
Gene Model: May 28th, 2012
23 days agobrs1 brassinosteroid synthesis1:
1.03
GRMZM2G065635
Liu, N et al. 2020. Mol Breed 40:71   AT3G50660 (TAIR) Reference: July 20th, 2020
Gene Product: September 20th, 2010
Variation: November 7th, 2013
Gene Model: October 3rd, 2012
23 days agotps7 terpene synthase7:
 
AC217050.4_FG007
Luck, K et al. 2020. Plant Mol Biol pp.doi: 10.1007/s11103-020-01037-4     Reference: July 20th, 2020
Gene Product: July 17th, 2016
Variation: May 28th, 2012
Gene Model: June 8th, 2012
23 days agorpl17b ribosomal protein L17b:
 
GRMZM2G702426
Dressano, K et al. 2020. Nature Plants pp.doi: 10.1038/s41477-020-0724-1     Reference: July 20th, 2020
Variation: June 7th, 2013
Gene Model: August 7th, 2014
25 days agobr2 brachytic2: like br1; mi1 is allelic and preceded (1935), but br2 name is retained due to long usagelike Arabidopsis ABC transporter B family member 1
1.06 - 1.07
GRMZM2G315375
Li, X et al. 2020. Int J Mol Sci 21:5052     Reference: July 18th, 2020
Gene Product: May 1st, 2012
Variation: December 30th, 2019
Gene Model: April 28th, 2012
25 days agolg1 liguleless1: In the liguleless1 mutant, ligule and auricle are missing; leaves are upright
2.01
   Li, X et al. 2020. Int J Mol Sci 21:5052     Reference: July 18th, 2020
Gene Product: December 18th, 2014
Variation: November 8th, 2007
25 days agoaps1 ATP sulfurylase1:
1.10
GRMZM2G149952
Li, X et al. 2020. Int J Mol Sci 21:5052     Reference: July 18th, 2020
Gene Product: September 1st, 2003
Variation: September 26th, 2017
Gene Model: September 26th, 2017
25 days agoabi12 ABI3-VP1-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Li, X et al. 2020. Int J Mol Sci 21:5052     Reference: July 18th, 2020
Variation: September 20th, 2019
25 days agoacs7 1-aminocyclopropane-1-carboxylate synthase7: mutations in the 3' end of the 4th Exon result in a semi-drawf phenotype; knockout mutants can give significantly taller plants
10.05
GRMZM5G894619
Li, X et al. 2020. Int J Mol Sci 21:5052     Reference: July 18th, 2020
Gene Product: May 16th, 2016
Variation: April 23rd, 2020
Gene Model: January 21st, 2016
25 days agodwil1 dwarf & irregular leaf1: mutant plants have shorter internodes, shorter, wider and wrinkled leaves, as well as smaller leaf angle
 
GRMZM2G013657
Li, X et al. 2020. Int J Mol Sci 21:5052     Reference: July 18th, 2020
Gene Product: July 5th, 2019
Variation: March 18th, 2013
Gene Model: March 12th, 2013
25 days agobri1a brassinosteroid insensitive1a: Encodes a brassinosteroid receptor
 
GRMZM2G048294
Li, X et al. 2020. Int J Mol Sci 21:5052   AT4G39400 (TAIR)
LOC_Os01g52050 (MSU/TIGR)
Reference: July 18th, 2020
Variation: July 17th, 2015
Gene Model: July 16th, 2015
25 days agobri1b brassinosteroid insensitive1b: Encodes a brassinosteroid receptor
 
GRMZM2G449830
Li, X et al. 2020. Int J Mol Sci 21:5052     Reference: July 18th, 2020
Variation: July 17th, 2015
Gene Model: July 16th, 2015
25 days agoili1 increased leaf inclination1: knockout mutants confer decreased leaf angle
 
GRMZM2G072820
Li, X et al. 2020. Int J Mol Sci 21:5052   LOC_Os04g54900 (MSU/TIGR)
Os04g0641700 (Gramene)
Reference: July 18th, 2020
Gene Product: September 14th, 2016
Variation: September 19th, 2019
Gene Model: September 19th, 2019
25 days agoibh1 increased leaf inclination1-binding bhlh 1:
 
GRMZM2G388823
Li, X et al. 2020. Int J Mol Sci 21:5052   AT2G43060 (TAIR) Reference: July 18th, 2020
Gene Product: September 14th, 2016
Variation: January 28th, 2020
Gene Model: January 28th, 2020
25 days agobbc1 breast basic conserved homolog1: a CK responsive gene tightly correlated with cell division, implying that CK may modulate leaf angle through the control of cell profile
 
GRMZM2G145280
Li, X et al. 2020. Int J Mol Sci 21:5052   AT3G49010 (TAIR) Reference: July 18th, 2020
Gene Product: January 13th, 2020
Gene Model: July 18th, 2020
26 days agozep1 zeaxanthin epoxidase1:
2.04
GRMZM2G127139
Chen, M-X et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13849     Reference: July 17th, 2020
Gene Product: December 10th, 2011
Variation: August 29th, 2011
Gene Model: April 8th, 2013
26 days agobd1 branched silkless1: ear silkless with indeterminate branches at base; tassel proliferated, bushy
7.05
GRMZM2G307119
Hao, LD et al. 2020. PeerJ 8:.e9551   At5g18560 (TAIR)
LOC_Os01g21820 (MSU/TIGR)
Os07g0669500 (Gramene)
Reference: July 17th, 2020
Gene Product: July 27th, 2009
Variation: August 13th, 2011
Gene Model: July 14th, 2011
26 days agoereb102 AP2-EREBP-transcription factor 102: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to ethylene-responsive transcription factor RAP2-12 of A. thaliana
7.02
GRMZM2G052667
Hao, LD et al. 2020. PeerJ 8:.e9551     Reference: July 17th, 2020
Variation: September 1st, 2003
Gene Model: September 6th, 2018
26 days agoesp5 embryo specific protein5: (was Emb5); cDNA clone, embryo specific, ABA responsive, deduced amino acid sequence very hydrophilic and gly/glu-rich (aka emb5)
6.05
GRMZM2G162659
Chen, M-X et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13849     Reference: July 17th, 2020
Variation: September 1st, 2003
Gene Model: July 27th, 2016
26 days agoereb160 AP2-EREBP-transcription factor 160: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
9.01
GRMZM2G171179
Hao, LD et al. 2020. PeerJ 8:.e9551     Reference: July 17th, 2020
Variation: September 1st, 2003
Gene Model: September 25th, 2015
26 days agoereb148 AP2-EREBP-transcription factor 148: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Hao, LD et al. 2020. PeerJ 8:.e9551     Reference: July 17th, 2020
Variation: May 4th, 2016
26 days agoereb94 AP2-EREBP-transcription factor 94: strongly expressed in the maize endosperm; might act as a key regulator of starch synthesis in maize (Li et al., 2017)
 
   Hao, LD et al. 2020. PeerJ 8:.e9551     Reference: July 17th, 2020
Variation: May 9th, 2017
26 days agoereb22 AP2-EREBP-transcription factor 22: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.03
GRMZM2G006745
Han, QH et al. 2020. Plant J pp.doi: 10.1111/tpj.14922     Reference: July 14th, 2020
Variation: July 17th, 2020
Gene Model: September 18th, 2018
27 days agopebp7 phosphatidylethanolamine-binding protein7:
 
   Castelletti, S et al. 2020. PLoS Genetics pp.doi: 10.1371/journal.pgen.1008882     Reference: July 16th, 2020
Variation: June 19th, 2015
27 days agopebp8 phosphatidylethanolamine-binding protein8: florigen activity: complements Arabidopsis FT mutants, promoting flowering at short days. Requires functional id1 gene.(Lazakis et al 2011)
 
GRMZM2G179264
Castelletti, S et al. 2020. PLoS Genetics pp.doi: 10.1371/journal.pgen.1008882     Reference: July 16th, 2020
Gene Product: May 6th, 2011
Variation: June 19th, 2015
Gene Model: May 6th, 2011
27 days agopebp12 phosphatidylethanolamine-binding protein12:
 
   Castelletti, S et al. 2020. PLoS Genetics pp.doi: 10.1371/journal.pgen.1008882     Reference: July 16th, 2020
Variation: December 10th, 2010
27 days agoumc1409  :
7.02
GRMZM2G396540
    Variation: September 1st, 2003
Gene Model: July 16th, 2020
27 days agomads69 MADS-transcription factor 69: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.contributes to natural variation in flowering time in maize
 
   Castelletti, S et al. 2020. PLoS Genetics pp.doi: 10.1371/journal.pgen.1008882     Reference: July 16th, 2020
Variation: October 5th, 2018
27 days agouce4 ubiquitin conjugating enzyme4:
2.01
   Castelletti, S et al. 2020. PLoS Genetics pp.doi: 10.1371/journal.pgen.1008882     Reference: July 16th, 2020
Gene Product: December 19th, 2019
Variation: July 29th, 2004
27 days agoalt5 alanine aminotransferase5: putative alanine aminotransferase; found in embryo (Davidson 2011), not reported in seedling leaf (Tausta et al 2014)
7.02
GRMZM2G117230
Tausta, SL et al. 2014. J Exp Bot 65:3543-3555     Reference: November 20th, 2014
Gene Product: September 1st, 2003
Gene Model: July 16th, 2020
27 days agordm4 RNA-directed DNA methylation4: mutants have an opaque endosperm
 
GRMZM2G098603
Jia, SG et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa325     Reference: July 16th, 2020
Gene Product: July 16th, 2020
Variation: July 16th, 2020
Gene Model: July 16th, 2020
27 days agoalt11 alanine aminotransferase11:
 
GRMZM2G088018
    Gene Product: September 1st, 2003
Gene Model: July 16th, 2020
27 days agoconz1 constans1: homologous to photoperiod genes constans (co) from Arabidopsis and heading date 1 (hd1) in rice. (Miller 2008)
9.03
   Castelletti, S et al. 2020. PLoS Genetics pp.doi: 10.1371/journal.pgen.1008882     Reference: July 16th, 2020
Gene Product: June 18th, 2018
Variation: July 28th, 2008
29 days agogpc1 glyceraldehyde-3-phosphate dehydrogenase1: cytosolic, C subunit, type 3 gene; coding region has sequence homology to gpc2, unique 3' untranslated region, constitutive expression; SSRs phi026, 079
4.05
   Han, QH et al. 2020. Plant J pp.doi: 10.1111/tpj.14922     Reference: July 14th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
29 days agorafs1 raffinose synthase1: mutants have significantly reduced seed vigor
3.03
GRMZM2G150906
Han, QH et al. 2020. Plant J pp.doi: 10.1111/tpj.14922     Reference: July 14th, 2020
Gene Product: October 25th, 2019
Variation: March 23rd, 2018
Gene Model: March 23rd, 2018
29 days agoaas2 auxin amido synthetase2: encodes an auxin-responsive indole-3-acetic acid-amido synthetase (GH3)
 
GRMZM2G378106
Han, QH et al. 2020. Plant J pp.doi: 10.1111/tpj.14922     Reference: July 14th, 2020
Gene Product: October 21st, 2019
Gene Model: October 21st, 2019
29 days agogols1 galactinol synthase1: Similar to water stress-induced protein of rice (per Baysdorfer, C.)
1.03
GRMZM2G165919
Han, QH et al. 2020. Plant J pp.doi: 10.1111/tpj.14922     Reference: July 14th, 2020
Gene Product: March 1st, 2018
Variation: January 26th, 2010
Gene Model: December 24th, 2015
29 days agogols3 galactinol synthase3: Expressed late in seed developmentExpressed during post-imbibition dehydration stress
9.04
GRMZM5G872256
Han, QH et al. 2020. Plant J pp.doi: 10.1111/tpj.14922     Reference: July 14th, 2020
Gene Product: March 1st, 2018
Variation: January 26th, 2010
Gene Model: December 24th, 2015
30 days agobz1 bronze1: modifies purple aleurone and plant color to pale or reddish brown; anthers yellow-fluorescent; allele bz1-m4 = sh1-bz1-m4; SSR phi017NCBI: UDPG-flavonoid 3-oxy glucosyl transferase
9.02
   Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: July 4th, 2018
Variation: July 13th, 2020
30 days agolox10 lipoxygenase10: green leaf volatiles, circadian, herbivore defense; sequence predicts plastidic location; images show location in non-chlorophyll containing organelles
4.09
GRMZM2G015419
Wang, K-D et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1792187     Reference: July 13th, 2020
Gene Product: January 3rd, 2018
Variation: February 28th, 2020
Gene Model: October 29th, 2015
30 days agoopr7 12-oxo-phytodienoic acid reductase7: peroxisomal; jasmonic acid synthesis; opr7 opr8 double mutants are feminized, and have increased susceptibiliy to insect and fungal pests
 
GRMZM2G148281
Wang, K-D et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1792187     Reference: July 13th, 2020
Gene Product: September 3rd, 2010
Variation: December 16th, 2019
Gene Model: November 25th, 2013
30 days agoopr8 12-oxo-phytodienoic acid reductase8: peroxisomal; synthesis of jasmonic acid
4.05
GRMZM2G082087
Wang, K-D et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1792187     Reference: July 13th, 2020
Gene Product: September 3rd, 2010
Variation: December 16th, 2019
Gene Model: November 25th, 2013
30 days agosus6 sucrose synthase6:
 
GRMZM2G045171
Chen, HM et al. 2020. J Southern Agric 51:1098-1107     Reference: July 13th, 2020
Gene Product: October 25th, 2006
Gene Model: July 13th, 2020
30 days agosus7 sucrose synthase7:
 
GRMZM2G060659
Chen, HM et al. 2020. J Southern Agric 51:1098-1107     Reference: July 13th, 2020
Gene Product: October 25th, 2006
Gene Model: July 13th, 2020
30 days agopco086679  :
7.01
GRMZM2G132568
    Variation: September 25th, 2007
Gene Model: July 13th, 2020
32 days agoIDP293  :
6.01
GRMZM2G075408
    Variation: March 31st, 2005
Gene Model: July 11th, 2020
33 days agoesr6 embryo surrounding region6: transcript specific to embryo surrounding region near basal endosperm transfer layer
4.09
GRMZM2G048353
Odintsova, TI et al. 2020. Biomolecules 10:1029     Reference: July 10th, 2020
Gene Product: July 25th, 2018
Variation: January 5th, 2016
Gene Model: January 5th, 2016
33 days agoes4 embryo sac4: one of 4-5 copy gene family; pre-zygotic, embryo sac specific; required for pollen tube growth arrest and burst
 
GRMZM2G009359
Odintsova, TI et al. 2020. Biomolecules 10:1029     Reference: July 10th, 2020
Gene Product: April 22nd, 2011
Variation: April 25th, 2011
Gene Model: April 22nd, 2011
33 days agoes1 embryo sac1: one of 4-5 copy gene family; pre-zygotic embryo sac specific; required for pollen tube growth arrest and burst
 
GRMZM2G012012
Odintsova, TI et al. 2020. Biomolecules 10:1029     Reference: July 10th, 2020
Gene Product: April 22nd, 2011
Variation: April 25th, 2011
Gene Model: April 22nd, 2011
33 days agoes2 embryo sac2: one of 4-5 copy gene family; pre-zygotic embryo sac specific; required for pollen tube growth arrest and burst
 
GRMZM2G009359
Odintsova, TI et al. 2020. Biomolecules 10:1029     Reference: July 10th, 2020
Gene Product: April 22nd, 2011
Gene Model: April 22nd, 2011
33 days agoes3 embryo sac3: one of 4-5 copy gene family; pre-zygotic embyro sac specific; required for pollen tube growth arrest and burst
 
GRMZM2G009359
Odintsova, TI et al. 2020. Biomolecules 10:1029     Reference: July 10th, 2020
Gene Product: April 22nd, 2011
Gene Model: April 22nd, 2011
33 days agoga20ox3 gibberellin 20-oxidase3: mutants have a semidwarf phenotype
 
GRMZM2G368411
Zhang, JJ et al. 2020. Frontiers Plant Sci 11:1048     Reference: July 10th, 2020
Gene Product: October 28th, 2014
Variation: July 10th, 2020
Gene Model: October 29th, 2014
33 days agodef2 defensin-like protein2:
 
GRMZM2G368861
Odintsova, TI et al. 2020. Biomolecules 10:1029     Reference: July 10th, 2020
Gene Product: July 25th, 2018
Gene Model: June 10th, 2016
33 days agodef4 defensin-like protein4:
 
GRMZM2G153488
Odintsova, TI et al. 2020. Biomolecules 10:1029     Reference: July 10th, 2020
Gene Product: July 25th, 2018
Gene Model: September 16th, 2017
33 days agodef1 defensin-like protein1:
10.03
GRMZM2G368890
Odintsova, TI et al. 2020. Biomolecules 10:1029     Reference: July 10th, 2020
Gene Product: July 25th, 2018
Gene Model: June 10th, 2016
33 days agoIDP455  :
6.01
GRMZM2G172664
    Variation: March 31st, 2005
Gene Model: July 10th, 2020
34 days agopsei2 cystatin2: cDNA expressed in E. coli inhibits cysteine proteinases; sequence and gene product activity distinct from psei1
8.08
   Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: April 21st, 2008
Variation: January 15th, 2015
34 days agomir1 maize insect resistance1: single copy cDNA
6.02
   Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: May 23rd, 2019
Variation: November 21st, 2017
34 days agocsu1187  :
6.01
GRMZM2G102737
Baysdorfer, C. 1996. Nucleotide sequence submission to dbEST     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: July 9th, 2020
34 days agocdpk13 calcium dependent protein kinase13: E. coli expressed fusion protein does not appear to require calcium
 
GRMZM2G173928
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: December 3rd, 2013
Variation: November 15th, 2013
Gene Model: March 31st, 2015
34 days agobm2 brown midrib2: brown pigmentation in the leaf midrib and tissues accumulate reduced levels of lignin; like bm1cDNA complements yeast met12 met13 mutant; one of two or more loci, second locus may be on chromosome 5 near gln4
1.11
GRMZM2G347056
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: August 28th, 2012
Variation: November 30th, 2013
Gene Model: November 30th, 2013
34 days agocat1 catalase1: electrophoretic mobility; cytosolic/glyoxysomal; tetrameric; intra/interlocus hybrid bands occur
5.03
   Du, HM et al. 2020. Frontiers Plant Sci 11:1016     Reference: July 9th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
34 days agotps4 terpene synthase4: gene product raised in E. coli forms same mixture of sesquiterpene olefins as tsp5 but with quantitative differences.
10.03
GRMZM2G117319
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: September 4th, 2008
Variation: September 4th, 2008
Gene Model: May 28th, 2012
34 days agotps5 terpene synthase5:
10.03
GRMZM2G074309
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: September 4th, 2008
Variation: September 4th, 2008
Gene Model: May 26th, 2012
34 days agotps10 terpene synthase10:
10.03
GRMZM2G179092
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: September 4th, 2008
Variation: September 4th, 2008
Gene Model: May 28th, 2012
34 days agohm1 Helminthosporium carbonum susceptibility1: disease lesions vs. yellowish flecks (Hm1, resistant) on leaves with Cochliobolus carbonum race 1
1.06
   Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: May 23rd, 2014
Variation: September 1st, 2003
34 days agomir2 maize insect resistance2: cDNA; SSR umc1178
6.02
GRMZM2G150256
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: September 1st, 2003
Variation: September 2nd, 2014
Gene Model: September 2nd, 2014
34 days agopme1 pectin methylesterase1: pollen; cDNA and genomic sequences
10.04
GRMZM2G125356
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: September 10th, 2018
Variation: October 8th, 2015
Gene Model: October 8th, 2015
34 days agochn2 chitinase2: acidic chitinase I, based on cDNA sequence similarity; Southern blots suggest multiple copies
6.01
   Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
34 days agobx7 benzoxazinone synthesis7: cytosolic O-methyl transferase; synthesis of cyclohydroxamates/DIMBOA; insect resistance in young seedlings; SSR umc2039, INDEL IDP478.
4.03
GRMZM2G441753
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: October 31st, 2011
Variation: October 26th, 2011
Gene Model: October 19th, 2011
34 days agofps3 farnesyl diphosphate synthase3: terpene based defense (Richter et al 2015)
3.07
GRMZM2G098569
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: August 18th, 2015
Gene Model: August 18th, 2015
34 days agopme31 pectin methylesterase31:
3.09
GRMZM2G004927
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: September 10th, 2018
Gene Model: December 28th, 2019
34 days agobx9 benzoxazinone synthesis9: cytosolic glucosyl transferase; redundant with bx8; synthesis of cyclic hydroxamates/DIMBOA; insect resistance in young seedlings
1.06
GRMZM2G161335
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: October 20th, 2011
Variation: October 27th, 2011
Gene Model: October 20th, 2011
34 days agotps2 terpene synthase2:
 
GRMZM2G046615
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: May 28th, 2012
Variation: May 28th, 2012
Gene Model: May 28th, 2012
34 days agotps3 terpene synthase3:
 
GRMZM2G064406
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: May 28th, 2012
Variation: May 28th, 2012
Gene Model: May 28th, 2012
34 days agotps9 terpene synthase9:
 
GRMZM2G465812
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: September 4th, 2008
Variation: May 28th, 2012
Gene Model: May 28th, 2012
34 days agoscp1 serine carboxypeptidase1: may play a role in the disease resistance response
 
GRMZM2G075676
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: August 5th, 2013
Gene Model: August 5th, 2013
34 days agoaos2 allene oxide synthesis2:
 
GRMZM2G072653
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: September 1st, 2003
Gene Model: October 29th, 2015
34 days agoaos3 allene oxide synthesis3:
 
GRMZM2G376661
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: September 1st, 2003
Gene Model: October 29th, 2015
34 days agoysl8 yellow stripe-like transporter8:
 
GRMZM2G018148
Yordem, BK et al. 2011. Ann Bot 108:821-833     Reference: July 8th, 2020
Gene Product: September 1st, 2003
Gene Model: July 9th, 2020
34 days agoalm3 aluminum tolerance3: Overexpression conferred improved Al tolerance
 
GRMZM5G886177
Du, HM et al. 2020. Frontiers Plant Sci 11:1016     Reference: July 9th, 2020
Gene Product: September 28th, 2005
Gene Model: July 9th, 2020
34 days agosod11 superoxide dismutase11:
 
GRMZM2G042080
Du, HM et al. 2020. Frontiers Plant Sci 11:1016     Reference: July 9th, 2020
Gene Product: September 1st, 2003
Gene Model: July 9th, 2020
34 days agopx16 peroxidase16:
 
GRMZM2G025441
Du, HM et al. 2020. Frontiers Plant Sci 11:1016     Reference: July 9th, 2020
Gene Product: September 18th, 2015
Gene Model: July 9th, 2020
34 days agoccp4 cysteine protease4: apoplastic; pest defense response
7.03
GRMZM2G108849
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: May 23rd, 2019
Gene Model: February 13th, 2014
34 days agommt1 methionine S-methyltransferase1:
8.05
GRMZM2G098031
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: October 25th, 2019
Variation: September 20th, 2018
Gene Model: September 20th, 2018
34 days agosrph1 SGT1 disease resistance protein homolog1: interacts with RACK1 protein involved in disease resistance (Wang et al 2014)
3.09
GRMZM2G105019
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Variation: March 31st, 2005
Gene Model: March 23rd, 2015
34 days agopx5 peroxidase 5: cathodal, presence-absence; expressed in all tissues except pollen; insect resistance
6.05
GRMZM2G450233
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: September 18th, 2015
Gene Model: December 30th, 2015
34 days agompk15 MAP kinase15:
6.01
GRMZM2G306028
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: July 12th, 2013
Gene Model: December 13th, 2019
34 days agopsei4 cystatin4:
8.01
GRMZM2G013461
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: April 21st, 2008
Variation: April 21st, 2008
Gene Model: July 28th, 2016
34 days agopsei9 cystatin9: apoplastic; necessary for Ustilago maydis infection;induced by U. maydis to bypass host immunity provided by apoplostic proteases(van der Linde 2012)
4.03
AC196110.4_FG004
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: April 21st, 2008
Variation: April 21st, 2008
Gene Model: February 12th, 2014
34 days agopsei10 cystatin10:
8.06
GRMZM2G030717
Tamiru, A et al. 2020. Sci. Rep. 10:11205     Reference: July 9th, 2020
Gene Product: April 21st, 2008
Variation: April 21st, 2008
Gene Model: June 1st, 2017
35 days agoms26 male sterile26: tapetal cells abnormal, die early; microspores vacuolate early and abort after the tetrad stage
1.02 - 1.02
   Qi, XT et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.06.003     Reference: July 8th, 2020
Gene Product: September 30th, 2013
Variation: July 8th, 2020
35 days agooy1 oil yellow1: seedling oily greenish-yellow; viable; fails to convert protoporphyrin IX to Mg-protoporphyrin; oy1-t tinged green; oy1-1039, oy1-1040 lethal; Oy1-700 dominant yellow-green; gene product confirmed by transgenic expression and genetic mapping.
10.02
   Khangura, RS et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00306     Reference: July 8th, 2020
Gene Product: June 8th, 2007
Variation: March 17th, 2011
35 days agoysl15 yellow stripe-like transporter15:
4.06
GRMZM2G368398
Yordem, BK et al. 2011. Ann Bot 108:821-833     Reference: July 8th, 2020
Gene Product: September 1st, 2003
Gene Model: April 18th, 2020
35 days agoamya2 alpha amylase2: a male gametophyte inactivation gene (Qi et al., 2020)
 
GRMZM2G070172
Qi, XT et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.06.003     Reference: July 8th, 2020
Gene Product: September 1st, 2003
Gene Model: July 8th, 2020
35 days agoysl6 yellow stripe-like transporter6:
 
GRMZM2G085833
Yordem, BK et al. 2011. Ann Bot 108:821-833     Reference: July 8th, 2020
Gene Product: September 1st, 2003
Gene Model: July 8th, 2020
35 days agoysl11 yellow stripe-like transporter11:
 
GRMZM5G812538
Yordem, BK et al. 2011. Ann Bot 108:821-833     Reference: July 8th, 2020
Gene Product: September 1st, 2003
Gene Model: July 8th, 2020
35 days agoysl9 yellow stripe-like transporter9:
 
GRMZM5G814926
Yordem, BK et al. 2011. Ann Bot 108:821-833     Reference: July 8th, 2020
Gene Product: September 1st, 2003
Gene Model: July 8th, 2020
35 days agoysl12 yellow stripe-like transporter12:
 
GRMZM5G893444
Yordem, BK et al. 2011. Ann Bot 108:821-833     Reference: July 8th, 2020
Gene Product: September 1st, 2003
Gene Model: July 8th, 2020
35 days agoysl17 yellow stripe-like transporter17:
 
GRMZM2G049238
Yordem, BK et al. 2011. Ann Bot 108:821-833     Reference: July 8th, 2020
Gene Product: September 1st, 2003
Gene Model: July 8th, 2020
35 days agoysl10 yellow stripe-like transporter10:
 
GRMZM2G062844
Yordem, BK et al. 2011. Ann Bot 108:821-833     Reference: July 8th, 2020
Gene Product: September 1st, 2003
Gene Model: July 8th, 2020
35 days agoysl13 yellow stripe-like transporter13:
 
GRMZM2G024196
Yordem, BK et al. 2011. Ann Bot 108:821-833     Reference: July 8th, 2020
Gene Product: September 1st, 2003
Gene Model: July 8th, 2020
35 days agoysl14 yellow stripe-like transporter14:
 
GRMZM2G120922
Yordem, BK et al. 2011. Ann Bot 108:821-833     Reference: July 8th, 2020
Gene Product: September 1st, 2003
Gene Model: July 8th, 2020
35 days agoysl18 yellow stripe-like transporter18:
 
GRMZM2G004440
Yordem, BK et al. 2011. Ann Bot 108:821-833     Reference: July 8th, 2020
Gene Product: September 1st, 2003
Gene Model: July 8th, 2020
36 days agophyB1 phytochromeB1: phyB1 mutants have elongated mesocotyl under red light. Double mutant with phyB2 is pale, narrow with elongated leaf blades, elongated internodes, less anthocyanin in sheath tissues, and earlier flowering time.
1.03
   Qiao, P et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1790824     Reference: July 7th, 2020
Gene Product: October 24th, 2007
Variation: May 19th, 2020
36 days agophyB2 phytochromeB2: phyB2 mutant is early flowering. Double mutant with phyB1 is pale, narrow with elongated leaf blades and elongated internodes, and contains less anthocyanin in sheath tissues.
9.05
   Qiao, P et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1790824     Reference: July 7th, 2020
Gene Product: October 24th, 2007
Variation: May 20th, 2020
36 days agopco101731  :
10.04
GRMZM2G414915
    Variation: September 25th, 2007
Gene Model: July 7th, 2020
36 days agoltp2 lipid transfer protein2:
9.03
GRMZM2G040689
Qiao, P et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1790824   AT2G10940 (TAIR) Reference: July 7th, 2020
Gene Product: September 1st, 2003
Gene Model: June 20th, 2020
37 days agoincw1 cell wall invertase1: full-length cDNA, similar to tobacco and carrot cell-wall invertase; Northerns specific to cell suspension and developing endosperm 28-32 DAP; expressed protein cross-reacts with antibodies to carrot cell-wall invertase; low copy number
5.04
   Huang, XJ et al. 2020. Int J Biol Macromol pp.doi: 10.1016/j.ijbiomac.2020.06.254     Reference: July 6th, 2020
Gene Product: June 12th, 2018
Variation: May 27th, 2015
37 days agomn1 miniature seed1: small, somewhat defective kernel, fully viable; invertase reduced
2.04
   Huang, XJ et al. 2020. Int J Biol Macromol pp.doi: 10.1016/j.ijbiomac.2020.06.254     Reference: July 6th, 2020
Gene Product: June 12th, 2018
Variation: April 13th, 2015
37 days agorgd1 ragged seedling1: (aka lbl1) seedling leaves narrow, thread-like, have difficulty in emerging; low temperature enhances expression
6.01 - 6.01
   Lopez-Ruiz, BA et al. 2020. Plants 9:849     Reference: July 6th, 2020
Gene Product: December 18th, 2014
Variation: June 8th, 2015
37 days agoincw3 invertase cell wall3: genomic sequence (GenBank); SSR umc1053
10.04
   Huang, XJ et al. 2020. Int J Biol Macromol pp.doi: 10.1016/j.ijbiomac.2020.06.254     Reference: July 6th, 2020
Gene Product: June 12th, 2018
Variation: October 7th, 2015
37 days agorel2 ramosa1 enhancer locus2: rel2 mutants dramatically increase the formation of long branches in ears of both ra1 and ra2 mutants
10.03
   Parvathaneni, RK et al. 2020. Genome Biol 21:165     Reference: July 6th, 2020
Gene Product: October 23rd, 2018
Variation: September 5th, 2019
37 days agoumc1369  :
 
GRMZM2G049269
Parvathaneni, RK et al. 2020. Genome Biol 21:165     Reference: July 6th, 2020
Variation: September 1st, 2003
Gene Model: September 3rd, 2019
37 days agosbp3 SBP-domain protein3: cDNA sequence with SSR's umc1572, umc1595
6.02
GRMZM2G101499
Parvathaneni, RK et al. 2020. Genome Biol 21:165     Reference: July 6th, 2020
Gene Product: July 5th, 2019
Variation: September 1st, 2003
Gene Model: December 18th, 2014
37 days agoarftf11 ARF-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Lopez-Ruiz, BA et al. 2020. Plants 9:849     Reference: July 6th, 2020
Variation: July 7th, 2017
37 days agoarftf23 ARF-transcription factor 23: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Lopez-Ruiz, BA et al. 2020. Plants 9:849     Reference: July 6th, 2020
Variation: July 7th, 2017
37 days agoarftf26 ARF-transcription factor 26: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Lopez-Ruiz, BA et al. 2020. Plants 9:849     Reference: July 6th, 2020
Variation: July 7th, 2017
37 days agotcptf14 TCP-transcription factor 14: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Parvathaneni, RK et al. 2020. Genome Biol 21:165     Reference: July 6th, 2020
Gene Product: September 27th, 2019
37 days agotcptf21 TCP-transcription factor 21: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Parvathaneni, RK et al. 2020. Genome Biol 21:165     Reference: July 6th, 2020
Gene Product: September 27th, 2019
37 days agotcptf25 TCP-transcription factor 25: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Parvathaneni, RK et al. 2020. Genome Biol 21:165     Reference: July 6th, 2020
Gene Product: September 27th, 2019
37 days agotcptf4 TCP-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Parvathaneni, RK et al. 2020. Genome Biol 21:165     Reference: July 6th, 2020
Gene Product: September 27th, 2019
37 days agotsh1 tassel sheath1: leaves develop at base of tassel branches and spikelet pairstsh1 was positionally cloned by Whipple et al, 2010. It was initially mapped between umc2059 and bnlg1740. The position was narrowed using a larger population, synteny with rice provided two candidate genes, one was selected based on sequencing differences from progenitors for three independent EMS alleles.
6.07
   Jiang, L et al. 2020. Int J Agric Biol 23:637-643     Reference: July 6th, 2020
Gene Product: December 6th, 2019
Variation: October 6th, 2011
37 days agomad2 mitotic arrest deficient homolog2: A CENPC homologue
 
GRMZM2G047143
Yu, HG et al. 1999. J Cell Biol 145:425-435     Reference: September 1st, 2003
Gene Product: July 6th, 2020
Gene Model: July 6th, 2020
37 days agorgd2 ragged seedling2: mutant expression is variable from reduced midrib/moderately narrow leaf to filamentous or even radial leaves
1.04
GRMZM5G852170
Lopez-Ruiz, BA et al. 2020. Plants 9:849     Reference: July 6th, 2020
Gene Product: August 12th, 2016
Variation: July 6th, 2010
Gene Model: August 17th, 2017
37 days agonced3 nine-cis-epoxycarotenoid dioxygenase3:
 
GRMZM5G858784
Parvathaneni, RK et al. 2020. Genome Biol 21:165     Reference: July 6th, 2020
Gene Product: September 20th, 2012
Gene Model: September 20th, 2012
37 days agodbp4 DRE-binding protein4: AP2/ERF transcription factor; confers resistance to drought and cold when transferred to Arabidopsis
 
GRMZM2G380377
Xiao, SL et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.07.002     Reference: July 6th, 2020
Gene Product: April 10th, 2013
Variation: April 10th, 2013
Gene Model: February 16th, 2012
37 days agoga20ox5 gibberellin 20-oxidase5:
 
GRMZM2G049418
Parvathaneni, RK et al. 2020. Genome Biol 21:165     Reference: July 6th, 2020
Gene Product: October 28th, 2014
Variation: July 6th, 2017
Gene Model: October 29th, 2014
37 days agowox4 wuschel-related homeobox4: embryonic WUSCHEL homeobox transcription factor specific to hypocotyl vascular system Nardmann et al 207
 
   Parvathaneni, RK et al. 2020. Genome Biol 21:165     Reference: July 6th, 2020
Gene Product: August 25th, 2017
Variation: May 1st, 2016
37 days agoincw7 invertase cell wall7:
 
GRMZM2G018716
Huang, XJ et al. 2020. Int J Biol Macromol pp.doi: 10.1016/j.ijbiomac.2020.06.254     Reference: July 6th, 2020
Gene Product: June 12th, 2018
Gene Model: June 12th, 2018
37 days agoinvinh4 invertase inhibitor4: inhibits both cell wall and vacuolar invertase activities from maize leaves
 
GRMZM2G368698
Huang, XJ et al. 2020. Int J Biol Macromol pp.doi: 10.1016/j.ijbiomac.2020.06.254     Reference: July 6th, 2020
Gene Product: August 7th, 2019
Gene Model: August 24th, 2019
37 days agopin2 PIN-formed protein2: see pin1
5.06
GRMZM2G074267
Lopez-Ruiz, BA et al. 2020. Plants 9:849     Reference: July 6th, 2020
Gene Product: April 21st, 2014
Variation: June 11th, 2007
Gene Model: June 7th, 2012
37 days agopin1 PIN-formed protein1: gene product cross-reacts with anti-AtPIN1 antibody and in tassel and ear, the PIN proteins are localized to a group of cells in subepidermal meristematic layers.
9.01
GRMZM2G398650
Lopez-Ruiz, BA et al. 2020. Plants 9:849     Reference: July 6th, 2020
Gene Product: April 21st, 2014
Variation: January 20th, 2015
Gene Model: June 7th, 2012
37 days agogata11 C2C2-GATA-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to GATA transcription factor 6 of A. thaliana
2.03
   Jiang, L et al. 2020. Int J Agric Biol 23:637-643     Reference: July 6th, 2020
Variation: September 25th, 2007
37 days agoumc2558  :
9.04
GRMZM2G020468
Lopez-Ruiz, BA et al. 2020. Plants 9:849     Reference: July 6th, 2020
Variation: January 22nd, 2019
Gene Model: January 23rd, 2019
40 days agomas1 malate synthase1: cDNA isolated by antibody screen
2.04
GRMZM2G102183
McLoughlin, F et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00226     Reference: July 3rd, 2020
Gene Product: September 1st, 2003
Variation: January 10th, 2013
Gene Model: November 20th, 2014
40 days agobm4 brown midrib4: mutant looks like bm1; encodes folylpolyglutamate synthetase
9.08
GRMZM2G393334
McLoughlin, F et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00226     Reference: July 3rd, 2020
Gene Product: December 17th, 2014
Variation: December 17th, 2014
Gene Model: December 17th, 2014
40 days agoppt1 plastid phosphate/phosphoenolpyruvate translocator1:
2.06
GRMZM2G047404
Zhang, QB et al. 2020. BMC Plant Biology 20:315     Reference: July 3rd, 2020
Gene Product: September 1st, 2003
Gene Model: October 9th, 2014
40 days agosweet3a sugars will eventually be exported transporter3a:
8.04
GRMZM2G179679
Zhang, QB et al. 2020. BMC Plant Biology 20:315     Reference: July 3rd, 2020
Gene Product: November 4th, 2015
Gene Model: September 19th, 2018
40 days agodhn3 dehydrin3:
4.06
GRMZM2G373522
Zhang, QB et al. 2020. BMC Plant Biology 20:315     Reference: July 3rd, 2020
Gene Product: August 5th, 2017
Variation: June 18th, 2011
Gene Model: October 16th, 2016
40 days agosweet4b sugars will eventually be exported transporter4b:
5.04
GRMZM2G144581
Zhang, QB et al. 2020. BMC Plant Biology 20:315     Reference: July 3rd, 2020
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
40 days agopep2 phosphoenolpyruvate carboxylase2: cDNA sequence, encodes C3 enzyme in roots (Northern blot analysis)
5.04
GRMZM2G069542
Zhang, QB et al. 2020. BMC Plant Biology 20:315     Reference: July 3rd, 2020
Gene Product: September 1st, 2003
Variation: October 1st, 2014
Gene Model: August 13th, 2014
40 days agotpt1 triose phosphate translocator1: cDNA sequence similar to plant triosephospate/phosphate translocators
 
   Zhang, QB et al. 2020. BMC Plant Biology 20:315     Reference: July 3rd, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
40 days agonced5 nine-cis-epoxycarotenoid dioxygenase5:
 
GRMZM2G417954
Zhang, QB et al. 2020. BMC Plant Biology 20:315     Reference: July 3rd, 2020
Gene Product: September 20th, 2012
Variation: September 1st, 2011
Gene Model: September 20th, 2012
40 days agohex7 hexokinase7:
 
GRMZM2G051806
McLoughlin, F et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00226     Reference: July 3rd, 2020
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
40 days agosweet15b sugars will eventually be exported transporter15b: similar to senescence-associated protein 29 of A. thaliana
 
GRMZM5G872392
Zhang, QB et al. 2020. BMC Plant Biology 20:315     Reference: July 3rd, 2020
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
40 days agosweet17a sugars will eventually be exported transporter17a:
 
GRMZM2G106462
Zhang, QB et al. 2020. BMC Plant Biology 20:315     Reference: July 3rd, 2020
Gene Product: November 4th, 2015
Variation: February 23rd, 2019
Gene Model: November 3rd, 2015
40 days agoatg12 autophagy12: Mutants are phenotypically normal and fertile when grown under nutrient-rich conditions. However, when nitrogen-starved, seedling growth is severely arrested, and as the plants mature, they show enhanced leaf senescence and stunted ear development.
 
GRMZM5G842517
McLoughlin, F et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00226     Reference: July 3rd, 2020
Variation: August 15th, 2017
Gene Model: August 15th, 2017
40 days agoxat1 xylan α-1,3-arabinofuranosyl-transferase1:
 
GRMZM2G096946
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 3rd, 2020
Gene Model: July 2nd, 2020
40 days agoxat2 xylan α-1,3-arabinofuranosyl-transferase2:
 
   Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 3rd, 2020
40 days agoxat3 xylan α-1,3-arabinofuranosyl-transferase3:
 
GRMZM2G447347
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 3rd, 2020
Gene Model: July 2nd, 2020
40 days agolug9 leunig-related9:
 
GRMZM2G425377
McLoughlin, F et al. 2020. Plant Cell pp.doi: 10.1105/tpc.20.00226     Reference: July 3rd, 2020
Gene Product: October 23rd, 2018
Gene Model: July 3rd, 2020
40 days agodhn15 dehydrin15:
 
GRMZM2G147014
Zhang, QB et al. 2020. BMC Plant Biology 20:315     Reference: July 3rd, 2020
Gene Product: August 5th, 2017
Gene Model: July 3rd, 2020
40 days agosweet6a sugars will eventually be exported transporter6a: similar to nodulin MtN3-like protein of A. thaliana
3.09
GRMZM2G157675
Zhang, QB et al. 2020. BMC Plant Biology 20:315     Reference: July 3rd, 2020
Gene Product: November 4th, 2015
Variation: March 31st, 2005
Gene Model: November 3rd, 2015
40 days agomagi93696  :
10.04
GRMZM2G476555
    Variation: March 31st, 2005
Gene Model: July 3rd, 2020
40 days agocesa10 cellulose synthase10: gene exhibits coexpression with the genes cesa11 and cesa12.
1.08
GRMZM2G445905
Zhang, QB et al. 2020. BMC Plant Biology 20:315     Reference: July 3rd, 2020
Gene Product: October 7th, 2016
Gene Model: July 22nd, 2015
40 days agocesa11 cellulose synthase 11: coordinately expressed with loci cesa10 and cesa12
3.07
GRMZM2G055795
Zhang, QB et al. 2020. BMC Plant Biology 20:315     Reference: July 3rd, 2020
Gene Product: October 7th, 2016
Gene Model: July 22nd, 2015
40 days agocesa12 cellulose synthase 12: coordinately expressed with cesa10 and cesa11
7.02
GRMZM2G142898
Zhang, QB et al. 2020. BMC Plant Biology 20:315     Reference: July 3rd, 2020
Gene Product: October 7th, 2016
Gene Model: July 22nd, 2015
40 days agosus2 sucrose synthase2: Encodes sucrose synthase-2 (SUS2), one of 3 loci defined for this function; compare sh1 and sus1.
1.04
GRMZM2G318780
Zhang, QB et al. 2020. BMC Plant Biology 20:315     Reference: July 3rd, 2020
Gene Product: October 25th, 2006
Variation: February 1st, 2020
Gene Model: August 3rd, 2013
40 days agopcr1 protochlorophyllide reductase1: leaf cDNA csu349 similar to plant protochlorophyllide reductase
2.01
GRMZM2G084958
Zhang, QB et al. 2020. BMC Plant Biology 20:315     Reference: July 3rd, 2020
Gene Product: June 8th, 2019
Variation: February 25th, 2013
Gene Model: October 8th, 2014
40 days agovp14 viviparous14: viviparous; yellow endosperm; abscisic acid biosynthesis; SSR umc1218
1.08
GRMZM2G014392
Zhang, QB et al. 2020. BMC Plant Biology 20:315     Reference: July 3rd, 2020
Gene Product: September 20th, 2012
Variation: June 25th, 2007
Gene Model: May 13th, 2011
41 days agocesa9 cellulose synthase9: cDNA
2.06
   Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: October 7th, 2016
Variation: January 3rd, 2014
41 days agoxt4 beta-1,4-xylosyltransferase4:
3.05
GRMZM2G056702
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 2nd, 2020
Gene Model: April 4th, 2020
41 days agocesa13 cellulose synthase13: NCBI: cellulose synthase A catalytic subunit 4 [UDP-forming]-like
 
GRMZM2G037413
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: October 7th, 2016
Gene Model: April 1st, 2017
41 days agocesa14 cellulose synthase14:
 
   Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: October 7th, 2016
41 days agocesa15 cellulose synthase15:
 
GRMZM2G339645
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: October 7th, 2016
Gene Model: July 2nd, 2020
41 days agoxt2 beta-1,4-xylosyltransferase2:
 
GRMZM2G448834
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 2nd, 2020
Gene Model: July 2nd, 2020
41 days agoxt3 beta-1,4-xylosyltransferase3:
 
   Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 2nd, 2020
41 days agoxt5 beta-1,4-xylosyltransferase5:
 
GRMZM5G898668
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 2nd, 2020
Gene Model: July 2nd, 2020
41 days agoxt6 beta-1,4-xylosyltransferase6:
 
GRMZM2G000581
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 2nd, 2020
Gene Model: July 2nd, 2020
41 days agoxt7 beta-1,2-xylosyltransferase7:
 
GRMZM2G354610
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: February 10th, 2020
Gene Model: July 2nd, 2020
41 days agoxt8 beta-1,2-xylosyltransferase8:
 
   Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: February 10th, 2020
41 days agoxt9 beta-1,2-xylosyltransferase9:
 
GRMZM2G074896
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: February 10th, 2020
Gene Model: July 2nd, 2020
41 days agoxt10 beta-1,2-xylosyltransferase10:
 
GRMZM2G022442
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: February 10th, 2020
Gene Model: July 2nd, 2020
41 days agoxgt1 xyloglucan glycosyltransferase1:
 
GRMZM2G142685
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 2nd, 2020
Gene Model: July 2nd, 2020
41 days agoxgt2 xyloglucan glycosyltransferase2:
 
GRMZM2G135286
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 2nd, 2020
Gene Model: July 2nd, 2020
41 days agoxgat1 xyloglucan galactosyltransferase1:
 
GRMZM2G075492
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 2nd, 2020
Gene Model: July 2nd, 2020
41 days agofut1 galactoside 2-alpha-L-fucosyltransferase1:
 
GRMZM2G096268
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 2nd, 2020
Gene Model: July 2nd, 2020
41 days agofut2 galactoside 2-alpha-L-fucosyltransferase2:
 
GRMZM2G127184
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 2nd, 2020
Gene Model: July 2nd, 2020
41 days agofut3 galactoside 2-alpha-L-fucosyltransferase3:
 
GRMZM2G080696
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 2nd, 2020
Gene Model: July 2nd, 2020
41 days agofut4 galactoside 2-alpha-L-fucosyltransferase4:
 
GRMZM2G387087
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 2nd, 2020
Gene Model: July 2nd, 2020
41 days agofut5 galactoside 2-alpha-L-fucosyltransferase5:
 
GRMZM2G471594
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 2nd, 2020
Gene Model: July 2nd, 2020
41 days agopmt1 pectin methyltransferase1:
 
GRMZM2G000764
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 2nd, 2020
Gene Model: July 2nd, 2020
41 days agopmt2 pectin methyltransferase2:
 
GRMZM2G140893
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 2nd, 2020
Gene Model: July 2nd, 2020
41 days agofut6 O-fucosyltransferase6:
 
GRMZM2G104511
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 2nd, 2020
Gene Model: July 2nd, 2020
41 days agoarad1 arabinosyltransferase1:
 
GRMZM2G060579
Kozlova, LV et al. 2020. Sci. Rep. 10:10956     Reference: July 2nd, 2020
Gene Product: July 2nd, 2020
Gene Model: July 2nd, 2020
42 days agopza02421  :
4.08
   Zhang, XX et al. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-020-03639-4     Reference: July 1st, 2020
Gene Product: November 11th, 2017
Variation: September 25th, 2007
42 days agorip1 ribosome-inactivating protein1: electrophoretic mobility, seed-specific, abundant 32kD endosperm protein (b32 protein), cytosolic, inactivates rabbit (not maize or wheat) ribosomes; cDNA ZmRIP3, SSR phi014, phi060, umc1202
8.03
GRMZM2G063536
Zhang, XX et al. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-020-03639-4     Reference: July 1st, 2020
Gene Product: September 1st, 2003
Variation: April 19th, 2005
Gene Model: April 18th, 2017
42 days agormr2 required to maintain repression 2:
 
GRMZM2G009208
Zhang, XX et al. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-020-03639-4     Reference: July 1st, 2020
Gene Product: August 28th, 2012
Variation: August 28th, 2012
Gene Model: August 28th, 2012
42 days agohsftf23 HSF-transcription factor 23: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, XX et al. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-020-03639-4     Reference: July 1st, 2020
Gene Product: May 15th, 2020
42 days agosbp7 SBP-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, XX et al. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-020-03639-4     Reference: July 1st, 2020
Gene Product: July 5th, 2019
42 days agotcptf34 TCP-transcription factor 34: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, XX et al. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-020-03639-4     Reference: July 1st, 2020
Gene Product: September 27th, 2019
42 days agoatg13c autophagy13c:
2.03
GRMZM5G825909
Zhang, XX et al. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-020-03639-4     Reference: July 1st, 2020
Variation: July 29th, 2004
Gene Model: August 15th, 2017
42 days agorcc2 regulator of chromosome condensation2:
 
GRMZM2G003565
Fernandez, MB et al. 2020. Plant Growth Regulation pp.doi: 10.1007/s10725-020-00639-8   AT5G63860 (TAIR) Reference: July 1st, 2020
Variation: November 18th, 2016
Gene Model: November 18th, 2016
42 days agodbb2 double B-box zinc finger protein2:
 
GRMZM2G131982
Zhang, XX et al. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-020-03639-4     Reference: July 1st, 2020
Gene Product: May 10th, 2017
Gene Model: May 10th, 2017
42 days agoupl13 ubiquitin-protein ligase13:
 
GRMZM2G104920
Fernandez, MB et al. 2020. Plant Growth Regulation pp.doi: 10.1007/s10725-020-00639-8   AT2G32950 (TAIR) Reference: July 1st, 2020
Gene Product: March 26th, 2020
Gene Model: March 26th, 2020
42 days agorup1 repressor of UV-B photomorphogenesis homolog1:
 
GRMZM2G389155
Fernandez, MB et al. 2020. Plant Growth Regulation pp.doi: 10.1007/s10725-020-00639-8   AT5G23730 (TAIR) Reference: July 1st, 2020
Gene Product: July 1st, 2020
Gene Model: July 1st, 2020
42 days agoAY111254  :
3.09
GRMZM2G089351
Zhang, XX et al. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-020-03639-4     Reference: July 1st, 2020
Variation: September 25th, 2007
Gene Model: April 9th, 2020
42 days agocyp11 cytochrome P450 11: Transcript induced by naphthalic anhydride or triasulfuron herbicide
3.09
GRMZM2G129860
Zhang, XX et al. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-020-03639-4     Reference: July 1st, 2020
Gene Product: September 26th, 2016
Variation: January 22nd, 2010
Gene Model: April 30th, 2013
43 days agoms6021 male sterile6021: mutants are male sterile; encodes a fatty-acyl-CoA reductase
9.04 - 9.06
GRMZM2G120987
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: December 1st, 2017
Variation: December 1st, 2017
Gene Model: December 1st, 2017
43 days agomyb103 MYB-transcription factor 103: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.06
   Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Variation: September 25th, 2007
43 days agocsu861  :
2.03
GRMZM2G001241
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Variation: September 1st, 2003
Gene Model: March 13th, 2020
43 days agosacd11 stearoyl-acyl-carrier-protein desaturase11:
10.04
AC215690.3_FG002
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: October 10th, 2016
Gene Model: October 10th, 2016
43 days agosacd3 stearoyl-acyl-carrier-protein desaturase3:
1.05
   Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: October 10th, 2016
Variation: November 3rd, 2017
43 days agohb2 hemoglobin2: suppression of expression is associated with programmed cell death (Huang et al 2014)
6.06
GRMZM2G168898
Jiang, SQ et al. 2020. Frontiers Plant Sci 11:861     Reference: June 30th, 2020
Gene Product: February 20th, 2018
Gene Model: May 15th, 2014
43 days agoplt2 phospholipid transfer protein homolog2: amino acid sequence, deduced from coleoptile cDNA; SSR locus umc1010
3.09
   Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
43 days agogl1 glossy1: cuticle wax altered; leaf surface bright, water adheres
7.02
   Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: September 1st, 2003
Variation: October 26th, 2006
43 days agogl2 glossy2: like gl1, but surface wax is all rice-grain-type particles
2.02
   Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117   AT4G24510 (TAIR) Reference: June 30th, 2020
Gene Product: February 28th, 2020
Variation: December 7th, 2012
43 days agogl4 glossy4: (was gl16) like gl1, but surface wax has reduced number of star-type particles
4.06
GRMZM2G003501
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: November 1st, 2018
Variation: November 1st, 2018
Gene Model: October 31st, 2018
43 days agogl8 glossy8: (was gl10) like gl1; cuticle wax in rice-grain-type particles; cDNA probesimilar to Arabidopsis beta-ketoacyl reductase 1
5.05
   Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: September 1st, 2003
Variation: June 14th, 2012
43 days agohsf1 hairy sheath frayed1: dominant Hsf1 plants have pubescent sheaths and leaf margins; liguled enations at leaf marginscytokinin receptor; cytokinin responsive histidine protein kinase
5.06 - 5.07
GRMZM2G151223
Muszynski, MG, et al. 2020. Plant Cell. 0:doi; 10.1105/tpc.19.00677     Reference: June 30th, 2020
Gene Product: May 20th, 2016
Variation: August 23rd, 2019
Gene Model: August 23rd, 2019
43 days agoumc1177  : nonspecific lipid-transfer protein identified in CERES sequences
1.01
GRMZM2G137329
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Variation: March 9th, 2016
Gene Model: March 9th, 2016
43 days agoumc1318  :
10.01
GRMZM2G093997
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Variation: September 1st, 2003
Gene Model: September 16th, 2017
43 days agoumc1411a  : NCBI: anther-specific proline-rich protein APGNCBI: similar to Arabidopsis GDSL esterase/lipase
1.09
   Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Variation: September 1st, 2003
43 days agoumc1447  :
5.03
GRMZM2G137694
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Variation: September 1st, 2003
Gene Model: June 23rd, 2018
43 days agoiaa38 Aux/IAA-transcription factor 38: similar to Arabidopsis auxin-responsive protein IAA27Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.04
GRMZM2G035465
Ramos Baez, R, et al. 2020. Plant Physiol. 0:doi: 10.1104/pp.19.01475     Reference: June 30th, 2020
Variation: September 1st, 2003
Gene Model: September 19th, 2018
43 days agogl13 glossy13: necrotic glossy leaf; plants that survive to maturity are sterile (both male and female) and smaller than nonmutant sibs.Ortholog of Poales ATP-binding cassette transporter, PDR-like subfamily G, domain 1
 
GRMZM2G118243
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: December 28th, 2015
Variation: December 19th, 2013
Gene Model: December 9th, 2013
43 days agoiaa4 Aux/IAA-transcription factor4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.10
GRMZM2G159285
Ramos Baez, R, et al. 2020. Plant Physiol. 0:doi: 10.1104/pp.19.01475     Reference: June 30th, 2020
Variation: November 15th, 2016
Gene Model: November 15th, 2016
43 days agoumc1594  :
3.09
GRMZM2G107839
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Variation: September 1st, 2003
Gene Model: September 16th, 2017
43 days agoiaa28 Aux/IAA-transcription factor 28: gene product physically interacts with LA1 (Dong et al 2013)Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Ramos Baez, R, et al. 2020. Plant Physiol. 0:doi: 10.1104/pp.19.01475     Reference: June 30th, 2020
Variation: July 8th, 2017
43 days agomyb151 MYB-transcription factor 151: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117   AT4G37780 (TAIR) Reference: June 30th, 2020
Gene Product: July 25th, 2017
43 days agowrky111 WRKY-transcription factor 111: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: July 24th, 2017
Variation: July 24th, 2017
43 days agoltpg1 glycosylphosphatidylinositol-anchored lipid protein transfer1: NCBI: putative bifunctional inhibitor/LTP/seed storage protein family
1.06
GRMZM2G083725
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: September 1st, 2003
Variation: December 2nd, 2016
Gene Model: December 2nd, 2016
43 days agophyA1 phytochromeA1: red/far red light signal receptor; major phytochrome A transcript in seedling leaf blade, sheath and mesocotyl under dark light conditions; is greatly reduced in white or red light. See also phyA2, phyB1, phyB2, phyC1, phyC2.
1.10
GRMZM2G157727
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: June 30th, 2009
Variation: September 25th, 2007
Gene Model: August 13th, 2014
43 days agophyA2 phytochromeA2: red/far red light signal receptor; minor phytochrome A trancript in dark grown seedling leaf blade, sheath, mesocotyl. See also phyA1, phyB1, phyB2, phyC1, phyC2
5.01
GRMZM2G181028
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: June 30th, 2009
Variation: September 1st, 2003
Gene Model: August 13th, 2014
43 days agogpat1 glycerol-3-phosphate acyltransferase1:
3.06
GRMZM2G083195
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: March 25th, 2019
Variation: March 23rd, 2015
Gene Model: March 24th, 2015
43 days agoplt1 phospholipid transfer protein homolog1: amino acid sequence, deduced from coleoptile cDNA, homologous to phospholipid transfer proteins
3.06
GRMZM2G101958
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: September 1st, 2003
Variation: March 17th, 2015
Gene Model: March 12th, 2015
43 days agokcs13 3-ketoacyl-CoA synthase13:
1.02
GRMZM2G445602
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: November 1st, 2018
Gene Model: September 2nd, 2018
43 days agogl26 glossy26: like gl1similar to Arabidopsis enoyl reductase
8.02
GRMZM2G481843
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: October 31st, 2018
Variation: October 31st, 2018
Gene Model: September 17th, 2018
43 days agocer8 eceriferum8: mutant seedlings displayed a typical glossy phenotype
10.03
GRMZM2G101875
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117   AT2G47240 (TAIR) Reference: June 30th, 2020
Gene Product: October 31st, 2018
Variation: October 31st, 2018
Gene Model: January 23rd, 2018
43 days agoMuk Mu killer: Mu killer methylates mutator TIRs and acts dominantly to silence active Mutator systems.
 
   Burgess, D; Li, H; Zhao, M; Kim, SY; Lisch, D. 2020. Genetics. 215:379-391     Reference: June 30th, 2020
Variation: November 12th, 2004
43 days agorum1 rootless with undetectable meristems1: primordia for seminal roots and for laterals on the primary root absent
 
GRMZM2G037368
Ramos Baez, R, et al. 2020. Plant Physiol. 0:doi: 10.1104/pp.19.01475     Reference: June 30th, 2020
Gene Product: June 16th, 2014
Variation: June 16th, 2014
Gene Model: June 16th, 2014
43 days agolox9 lipoxygenase9:
1.02
GRMZM2G017616
Jiang, SQ et al. 2020. Frontiers Plant Sci 11:861     Reference: June 30th, 2020
Gene Product: January 3rd, 2018
Variation: June 12th, 2014
Gene Model: October 23rd, 2013
43 days agorul1 rum1-like1:
 
GRMZM2G163848
Ramos Baez, R, et al. 2020. Plant Physiol. 0:doi: 10.1104/pp.19.01475     Reference: June 30th, 2020
Variation: November 18th, 2011
Gene Model: November 17th, 2011
43 days agosacd5 stearoyl-acyl-carrier-protein desaturase5:
 
GRMZM2G026793
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: October 10th, 2016
Gene Model: October 10th, 2016
43 days agosacd7 stearoyl-acyl-carrier-protein desaturase7:
 
GRMZM2G073540
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: October 10th, 2016
Gene Model: October 10th, 2016
43 days agogpat7 glycerol-3-phosphate acyltransferase7:
 
GRMZM2G064590
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: March 25th, 2019
Gene Model: March 25th, 2019
43 days agogpat20 glycerol-3-phosphate acyltransferase20:
 
GRMZM2G075295
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: March 25th, 2019
Gene Model: April 25th, 2019
43 days agocyp28 cytochrome P-450 28:
 
GRMZM2G132478
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: March 25th, 2019
Gene Model: January 7th, 2020
43 days agokcs19 3-ketoacyl-CoA synthase19:
 
GRMZM2G062718
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: November 1st, 2018
Gene Model: February 13th, 2020
43 days agokcs9 3-ketoacyl-CoA synthase9:
 
GRMZM2G104626
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: November 1st, 2018
Gene Model: February 13th, 2020
43 days agokcs11 3-ketoacyl-CoA synthase11:
 
GRMZM2G149636
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: November 1st, 2018
Gene Model: February 13th, 2020
43 days agokcs22 3-ketoacyl-CoA synthase22:
 
GRMZM2G168956
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: November 1st, 2018
Gene Model: February 13th, 2020
43 days agokcs24 3-ketoacyl-CoA synthase24:
 
GRMZM5G894016
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: November 1st, 2018
Gene Model: February 13th, 2020
43 days agocer1 eceriferum1:
 
GRMZM2G075255
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: February 13th, 2020
Gene Model: February 13th, 2020
43 days agocer2 eceriferum2:
 
GRMZM2G029912
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: February 13th, 2020
Gene Model: February 13th, 2020
43 days agolacs2 long chain acyl-CoA synthetase2:
 
GRMZM2G104847
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: October 31st, 2018
Gene Model: February 13th, 2020
43 days agohcd1 3-hydroxyacyl-CoA dehydratase1:
 
GRMZM2G151087
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: June 30th, 2020
Gene Model: June 30th, 2020
43 days agoadd1 alternative discordia1:
8.05
GRMZM2G050800
Schnable, J; Freeling, M. 2011. PLoS One 6(3):e17855. doi:10.1371/journal.pone.0017855     Reference: September 27th, 2011
Variation: March 6th, 2009
Gene Model: June 30th, 2020
43 days agoIDP2589  :
2.07
GRMZM2G102878
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Variation: March 31st, 2005
Gene Model: February 20th, 2019
43 days agoplt3 phospholipid transfer protein homolog3:
3.06
GRMZM2G126397
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: September 1st, 2003
Variation: January 8th, 2017
Gene Model: January 6th, 2017
43 days agoabcg11 ABC transporter G family member 11: Ortholog of Arabidopsis ABCG11/COF1/WBC11. Plasma membrane-localized ATP-binding cassette transporter; cutin transport to extracellular matrix. (A. Barkan, 2015)Ortholog of Arabidopsis ABCG11/COF1/WBC11, a plasma membrane- localized ATP-binding cassette transporter; cutin transport to extracellular matrix
2.02
GRMZM2G177812
Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: December 28th, 2015
Variation: December 30th, 2015
Gene Model: February 17th, 2015
43 days agophyC1 phytochromeC1: red/far red light signal receptor; major phytochrome C trancript in light and dark grown seedling leaf blade, sheath, mesocotyl. See also phyC2, phyA1, phyA2 phyB1, phyB2.
1.10
   Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: June 30th, 2009
Variation: June 30th, 2009
43 days agophyC2 phytochromeC2: red/far red light signal receptor; minor phytochrome C transcript in seedling leaf blade, sheath, mesocotyl. See also phyC1, phyA1, phyA2 phyB1, phyB2.
5.01
   Qiao, P, et al. 2020. Proc Natl Acad Sci, USA. 0:doi: 10.1073/pnas.2004945117     Reference: June 30th, 2020
Gene Product: June 30th, 2009
Variation: June 30th, 2009
44 days agomn2 miniature seed2: small kernel, loose pericarp; extremely defective but will germinate
7.02 - 7.06
GRMZM2G156794
Guan, HY et al. 2020. J Integ Agric. 19:1961-1973     Reference: June 29th, 2020
Gene Product: September 1st, 2003
Variation: June 29th, 2020
Gene Model: June 29th, 2020
46 days agocsu1005  :
9.07
GRMZM2G096348
Baysdorfer, C. 1996. Nucleotide sequence submission to dbEST     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: June 27th, 2020
46 days agoamt1 ammonium transporter1:
 
GRMZM2G175140
Hao, D-L et al. 2020. Frontiers Plant Sci 11:884     Reference: June 27th, 2020
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
46 days agoamt2 ammonium transporter2:
 
GRMZM2G028736
Hao, D-L et al. 2020. Frontiers Plant Sci 11:884     Reference: June 27th, 2020
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
46 days agoamt3 ammonium transporter3:
 
GRMZM2G118950
Hao, D-L et al. 2020. Frontiers Plant Sci 11:884     Reference: June 27th, 2020
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
46 days agogpm937b  :
9.07
GRMZM2G178787
    Variation: April 4th, 2007
Gene Model: June 27th, 2020
47 days agouaz7c01f11  :
 
GRMZM2G113159
    Variation: September 1st, 2003
Gene Model: June 26th, 2020
47 days agoumc1310  :
9.06
GRMZM5G826763
    Variation: September 1st, 2003
Gene Model: June 26th, 2020
47 days agoumc1794  :
9.06
GRMZM2G031447
    Variation: September 1st, 2003
Gene Model: June 26th, 2020
47 days agosmk7 small kernel7: mutants have small kernels, but normal composition of storage proteins
 
   Zhao, HL et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00502     Reference: June 26th, 2020
Gene Product: June 26th, 2020
Variation: June 26th, 2020
48 days agoasrp2 arginine/serine-rich splicing factor2: RNA binding nuclear splicing protein
2.05
GRMZM2G021223
Gupta, S et al. 2005. Biochim Biophys Acta 1728:105-114     Reference: March 16th, 2009
Gene Product: June 25th, 2020
Variation: February 7th, 2009
Gene Model: February 1st, 2018
48 days agouce10 ubiquitin conjugating enzyme10: similar to Arabidopsis Ubiquitin-conjugating enzyme family protein
6.07
GRMZM2G381709
Zhong, YT et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00378   AT2G33770 (TAIR) Reference: June 25th, 2020
Gene Product: December 19th, 2019
Variation: July 29th, 2004
Gene Model: June 25th, 2020
48 days agogpx5 glycerophosphodiester phosphodiesterase5:
1.08
GRMZM2G058227
Wang, JX et al. 2020. Crop J. doi: 10.1016/j.cj.2020.05.004     Reference: June 25th, 2020
Gene Product: June 24th, 2020
Gene Model: February 14th, 2020
48 days agogpx3 glycerophosphodiester phosphodiesterase3:
1.06
GRMZM2G064962
Wang, JX et al. 2020. Crop J. doi: 10.1016/j.cj.2020.05.004     Reference: June 25th, 2020
Gene Product: June 24th, 2020
Gene Model: February 10th, 2020
48 days agopht7 phosphate transporter protein7:
 
GRMZM2G112377
Zhong, YT et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00378     Reference: June 25th, 2020
Gene Product: June 16th, 2016
Variation: February 4th, 2011
Gene Model: May 27th, 2015
48 days agopht6 phosphate transporter protein6:
 
GRMZM5G881088
Zhong, YT et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00378     Reference: June 25th, 2020
Gene Product: June 16th, 2016
Variation: June 17th, 2020
Gene Model: May 27th, 2015
48 days agophos4 phosphate transporter4:
 
GRMZM2G064657
Zhong, YT et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00378   AT1G68740 (TAIR) Reference: June 25th, 2020
Gene Product: February 27th, 2016
Gene Model: February 27th, 2016
48 days agopht9 phosphate transporter protein9:
 
GRMZM2G070087
Zhong, YT et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00378     Reference: June 25th, 2020
Gene Product: June 16th, 2016
Gene Model: June 16th, 2016
48 days agogpx1 glycerophosphodiester phosphodiesterase1: catalyses the degradation of glycerophosphodiesters promoting phosphate recycling from senescing leaves to new leaves
 
GRMZM2G018820
Wang, JX et al. 2020. Crop J. doi: 10.1016/j.cj.2020.05.004     Reference: June 25th, 2020
Gene Product: June 24th, 2020
Gene Model: June 24th, 2020
48 days agogpx2 glycerophosphodiester phosphodiesterase2:
 
GRMZM5G829946
Wang, JX et al. 2020. Crop J. doi: 10.1016/j.cj.2020.05.004     Reference: June 25th, 2020
Gene Product: June 24th, 2020
Gene Model: June 24th, 2020
48 days agogpx4 glycerophosphodiester phosphodiesterase4:
 
GRMZM2G045753
Wang, JX et al. 2020. Crop J. doi: 10.1016/j.cj.2020.05.004     Reference: June 25th, 2020
Gene Product: June 24th, 2020
Gene Model: June 24th, 2020
48 days agogpx6 glycerophosphodiester phosphodiesterase6:
 
GRMZM2G153274
Wang, JX et al. 2020. Crop J. doi: 10.1016/j.cj.2020.05.004     Reference: June 25th, 2020
Gene Product: June 24th, 2020
Gene Model: June 24th, 2020
48 days agogpx7 glycerophosphodiester phosphodiesterase7:
 
GRMZM2G017550
Wang, JX et al. 2020. Crop J. doi: 10.1016/j.cj.2020.05.004     Reference: June 25th, 2020
Gene Product: June 24th, 2020
Gene Model: June 24th, 2020
48 days agogpx8 glycerophosphodiester phosphodiesterase8:
 
GRMZM2G038001
Wang, JX et al. 2020. Crop J. doi: 10.1016/j.cj.2020.05.004     Reference: June 25th, 2020
Gene Product: June 24th, 2020
Gene Model: June 24th, 2020
48 days agogpx9 glycerophosphodiester phosphodiesterase9:
 
GRMZM2G103382
Wang, JX et al. 2020. Crop J. doi: 10.1016/j.cj.2020.05.004     Reference: June 25th, 2020
Gene Product: June 24th, 2020
Gene Model: June 24th, 2020
48 days agogpx10 glycerophosphodiester phosphodiesterase10:
 
GRMZM2G018416
Wang, JX et al. 2020. Crop J. doi: 10.1016/j.cj.2020.05.004     Reference: June 25th, 2020
Gene Product: June 24th, 2020
Gene Model: June 24th, 2020
48 days agogpx11 glycerophosphodiester phosphodiesterase11:
 
GRMZM2G013324
Wang, JX et al. 2020. Crop J. doi: 10.1016/j.cj.2020.05.004     Reference: June 25th, 2020
Gene Product: June 24th, 2020
Gene Model: June 24th, 2020
48 days agogpx12 glycerophosphodiester phosphodiesterase12:
 
GRMZM2G060194
Wang, JX et al. 2020. Crop J. doi: 10.1016/j.cj.2020.05.004     Reference: June 25th, 2020
Gene Product: June 24th, 2020
Gene Model: June 24th, 2020
48 days agogpx13 glycerophosphodiester phosphodiesterase13:
 
GRMZM2G059129
Wang, JX et al. 2020. Crop J. doi: 10.1016/j.cj.2020.05.004     Reference: June 25th, 2020
Gene Product: June 24th, 2020
Gene Model: June 24th, 2020
48 days agogpx14 glycerophosphodiester phosphodiesterase14:
 
GRMZM2G481904
Wang, JX et al. 2020. Crop J. doi: 10.1016/j.cj.2020.05.004     Reference: June 25th, 2020
Gene Product: June 24th, 2020
Gene Model: June 24th, 2020
48 days agosrp32 serine residues protein32:
 
GRMZM2G436092
Gao, H; Gordon-Kamm, WJ; Lyznik, LA. 2004. Gene. 33:25-37     Reference: March 7th, 2005
Gene Product: June 25th, 2020
Gene Model: June 25th, 2020
48 days agosrp30 serine residues protein30:
 
GRMZM2G331811
Gao, H; Gordon-Kamm, WJ; Lyznik, LA. 2004. Gene. 33:25-37     Reference: March 7th, 2005
Gene Product: June 25th, 2020
Gene Model: June 25th, 2020
48 days agoccd9 carotenoid cleavage dioxygenase9: probable involvement regulatory pathway that adjusts Pi allocation
 
GRMZM2G164967
Zhong, YT et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00378     Reference: June 25th, 2020
Gene Product: September 20th, 2012
Gene Model: June 25th, 2020
48 days agoccd10 carotenoid cleavage dioxygenase10:
 
AC197699.3_FG002
Zhong, YT et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00378     Reference: June 25th, 2020
Gene Product: September 20th, 2012
Gene Model: June 25th, 2020
48 days agomads67 MADS-transcription factor 67: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.04
GRMZM2G147716
Sun, HY et al. 2020. New Phytol pp.doi: 10.1111/nph.16772     Reference: June 25th, 2020
Gene Product: September 1st, 2003
Gene Model: February 7th, 2019
48 days agopco138567b  :
9.04
GRMZM5G862107
    Variation: September 25th, 2007
Gene Model: June 25th, 2020
48 days agoasrp1 arginine/serine-rich splicing factor1: RNA binding nuclear splicing protein
10.04
GRMZM2G052166
Gupta, S et al. 2005. Biochim Biophys Acta 1728:105-114     Reference: March 16th, 2009
Gene Product: June 25th, 2020
Variation: February 7th, 2009
Gene Model: January 3rd, 2018
48 days agosrp31 serine residues protein31:
6.05
GRMZM2G170365
Gao, H; Gordon-Kamm, WJ; Lyznik, LA. 2004. Gene. 33:25-37     Reference: March 7th, 2005
Gene Product: June 25th, 2020
Gene Model: January 8th, 2020
51 days agocat2 catalase2: electrophoretic mobility; null allele is known; cytosolic/glyoxysomal; tetrameric; intra/interlocus hybrid bands occur
1.01
   Kong, XY et al. 2020. Plant Soil pp.doi: 10.1007/s11104-020-04605-1     Reference: June 22nd, 2020
Gene Product: September 1st, 2003
Variation: September 21st, 2012
51 days agosod9 superoxide dismutase9: cytosolic Cu/Zn enzyme, cDNA and genomic clones; SSR umc1094
9.04
   Kong, XY et al. 2020. Plant Soil pp.doi: 10.1007/s11104-020-04605-1     Reference: June 22nd, 2020
Gene Product: February 12th, 2007
Variation: January 21st, 2015
51 days agoapx3 ascorbate peroxidase homolog3:
 
GRMZM2G137839
Kong, XY et al. 2020. Plant Soil pp.doi: 10.1007/s11104-020-04605-1     Reference: June 22nd, 2020
Variation: August 11th, 2012
Gene Model: June 19th, 2013
51 days agomgt1 magnesium transporter1: encodes CorA/MRS2/MGT-type magnesium transporter
 
GRMZM2G108477
Kong, XY et al. 2020. Plant Soil pp.doi: 10.1007/s11104-020-04605-1     Reference: June 22nd, 2020
Gene Product: April 18th, 2016
Gene Model: April 18th, 2016
51 days agomgt8 magnesium transporter8: encodes CorA/MRS2/MGT-type magnesium transporter
 
GRMZM2G065971
Kong, XY et al. 2020. Plant Soil pp.doi: 10.1007/s11104-020-04605-1     Reference: June 22nd, 2020
Gene Product: April 18th, 2016
Gene Model: April 18th, 2016
51 days agomgt9 magnesium transporter9: encodes CorA/MRS2/MGT-type magnesium transporter
 
GRMZM2G139822
Kong, XY et al. 2020. Plant Soil pp.doi: 10.1007/s11104-020-04605-1     Reference: June 22nd, 2020
Gene Product: April 18th, 2016
Gene Model: April 18th, 2016
51 days agoprh23 protein phosphatase homolog23: encodes a protein phosphatase type 2C
 
GRMZM2G047376
Broz, A et al. 2001. J Exp Bot 52:1739-1740     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Gene Model: June 22nd, 2020
51 days agopx15 peroxidase15: expression enhanced by Mg application
 
GRMZM2G108123
Kong, XY et al. 2020. Plant Soil pp.doi: 10.1007/s11104-020-04605-1     Reference: June 22nd, 2020
Gene Product: September 18th, 2015
Gene Model: June 22nd, 2020
51 days agosod10 superoxide dismutase10: expression enhanced by Mg application
 
GRMZM2G124455
Kong, XY et al. 2020. Plant Soil pp.doi: 10.1007/s11104-020-04605-1     Reference: June 22nd, 2020
Gene Product: September 1st, 2003
Gene Model: June 22nd, 2020
53 days agotps17 terpene synthase17:
 
GRMZM2G010356
Liang, J et al. 2020. Biochemistry pp.doi: 10.1021/acs.biochem.0c00395     Reference: June 20th, 2020
Variation: July 17th, 2016
Gene Model: July 17th, 2016
53 days agodmp1 DUF679 domain membrane protein1: mutants enhance haploid induction
 
GRMZM2G465053
Vanous, K et al. 2020. Plants 9:773     Reference: June 20th, 2020
Gene Product: June 10th, 2019
Variation: June 10th, 2019
Gene Model: June 10th, 2019
53 days agomyo4 myosin4: may contribute to haploid induction rate due to qhir8
 
GRMZM2G435294
Vanous, K et al. 2020. Plants 9:773     Reference: June 20th, 2020
Gene Product: September 1st, 2003
Variation: June 20th, 2020
Gene Model: June 20th, 2020
54 days agospds1 spermidine synthase1: up-regulated by salt stress; regulated at the transcriptional level by ABA
2.06
GRMZM2G064163
Jimenez-Bremont, JF et al. 2007. Plant Physiol Biochem 45:812-821     Reference: June 19th, 2020
Gene Product: June 19th, 2020
Gene Model: March 18th, 2020
54 days agospms1 spermine synthase1: up-regulated by salt stress
 
GRMZM2G047867
Rodriguez-Kessler, M et al. 2006. Plant Growth Regulation 48:75-185     Reference: June 19th, 2020
Gene Product: June 19th, 2020
Gene Model: June 19th, 2020
56 days agosrl5 semi-rolled leaf5: required for the structure formation of the cuticular wax and could increase the drought tolerance by maintaining the proper cuticular wax structure in maize
 
GRMZM2G139852
Pan, ZY et al. 2020. J Integr Plant Biol pp.doi: 10.1111/jipb.12982     Reference: June 17th, 2020
Gene Product: June 17th, 2020
Variation: June 17th, 2020
Gene Model: June 17th, 2020
57 days agocpps2 copalyl diphosphate synthase2: encodes ent-kaurene synthase, a copalyl diphosphate synthase protein having close identity with An1 gene product; likely duplicate function explains why an1 plants are not fully dwarfed (Harris et al. 2005)
1.04
GRMZM2G044481
Shi, FM et al. 2018. Gene 659:100-108     Reference: June 16th, 2020
Gene Product: August 16th, 2012
Variation: January 22nd, 2018
Gene Model: September 12th, 2011
Recommended by Ed Coe:
January 8th, 2008
57 days agompk1 MAP kinase1: cDNA sequence; single copy
9.06
GRMZM2G053987
Shi, FM et al. 2018. Gene 659:100-108     Reference: June 16th, 2020
Gene Product: July 12th, 2013
Variation: January 16th, 2013
Gene Model: July 9th, 2013
57 days agoumc1497  :
2.07
GRMZM2G106393
    Variation: June 16th, 2020
Gene Model: June 16th, 2020
57 days agoprp5 pathogenesis related protein5:
1.06
GRMZM2G402631
Zang, ZY et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00850     Reference: June 16th, 2020
Gene Product: July 25th, 2018
Variation: August 20th, 2011
Gene Model: October 30th, 2015
57 days agolox1 lipoxygenase1: Full length cDNA is expressed in E. coli (Kim et al. 2003)
3.06
   Zang, ZY et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00850     Reference: June 16th, 2020
Gene Product: November 13th, 2014
Variation: July 24th, 2008
57 days agopx14 peroxidase14:
2.03
GRMZM2G108219
Shi, FM et al. 2018. Gene 659:100-108     Reference: June 16th, 2020
Gene Product: September 18th, 2015
Variation: February 22nd, 2015
Gene Model: February 23rd, 2015
57 days agoprp4 pathogenesis related protein4:
7.00
GRMZM2G465226
Zang, ZY et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00850     Reference: June 16th, 2020
Gene Product: July 25th, 2018
Variation: August 29th, 2011
Gene Model: November 20th, 2014
57 days agomkkk10 MAP kinase kinase kinase10: Function inferred from sequence similarilty
 
GRMZM2G180555
Shi, FM et al. 2018. Gene 659:100-108     Reference: June 16th, 2020
Gene Product: July 10th, 2013
Gene Model: July 11th, 2013
57 days agoprp6 pathogenesis-related protein6: encoded protein exerted broad spectrum antifungal activity
 
GRMZM2G112488
Zang, ZY et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00850     Reference: June 16th, 2020
Gene Product: July 25th, 2018
Gene Model: September 30th, 2017
57 days agomkk2 mitogen-activated protein kinase kinase2:
 
GRMZM2G400470
Shi, FM et al. 2018. Gene 659:100-108   AT4G29810 (TAIR) Reference: June 16th, 2020
Gene Product: July 12th, 2013
Gene Model: September 22nd, 2018
57 days agompk19 MAP kinase19:
 
GRMZM2G007848
Shi, FM et al. 2018. Gene 659:100-108     Reference: June 16th, 2020
Gene Product: July 12th, 2013
Gene Model: December 13th, 2019
57 days agolac7 laccase7:
 
GRMZM2G400390
Shi, FM et al. 2018. Gene 659:100-108     Reference: June 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 16th, 2020
57 days agodrg6 dark response gene6:
 
GRMZM2G112538
Zang, ZY et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00850     Reference: June 16th, 2020
Gene Product: July 25th, 2018
Gene Model: June 6th, 2020
57 days agoprp8 pathogenesis-related protein8:
 
GRMZM2G456997
Zang, ZY et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00850     Reference: June 16th, 2020
Gene Product: July 25th, 2018
Gene Model: June 16th, 2020
57 days agoprp9 pathogenesis-related protein9:
 
GRMZM2G075283
Shi, FM et al. 2018. Gene 659:100-108     Reference: June 16th, 2020
Gene Product: July 25th, 2018
Gene Model: June 16th, 2020
57 days agomat-r(mtNB) maturase related:
 
GRMZM5G851769
Shi, FM et al. 2018. Gene 659:100-108     Reference: June 16th, 2020
Gene Product: September 1st, 2003
Gene Model: June 16th, 2020
58 days agobsd2 bundle sheath defective2: bundle sheath chloroplasts disrupted; high chlorophyll fluorescence, seedling lethal
1.05
   Fan, ZY et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1777374     Reference: June 15th, 2020
Gene Product: September 1st, 2003
Variation: October 14th, 2009
58 days agobsd*-pg bundle sheath defective*-pale green: pale green, bundle sheath defective
 
   Fan, ZY et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1777374     Reference: June 15th, 2020
Variation: September 5th, 2015
58 days agosnrkII9 SnRK2 serine threonine protein kinase9:
 
GRMZM2G081915
Zeng, W et al. 2020. Theor Appl Genet pp.doi: 10.1007/s00122-020-03632-x     Reference: June 15th, 2020
Gene Product: April 14th, 2018
Gene Model: April 14th, 2018
58 days agoaldh20 aldehyde dehydrogenase20:
 
GRMZM2G130440
Fan, ZY et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1777374     Reference: June 15th, 2020
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
58 days agoIDP52  :
10.03
GRMZM5G828229
Fan, ZY et al. 2020. Plant Signal Behav pp.doi: 10.1080/15592324.2020.1777374     Reference: June 15th, 2020
Variation: March 31st, 2005
Gene Model: January 3rd, 2018
59 days agoumc1238  :
 
GRMZM2G072550
    Variation: September 1st, 2003
Gene Model: June 14th, 2020
60 days agoppr166 pentatricopeptide repeat protein166: functions in the editing of multiple mitochondrial transcripts; mutants have an empty pericarp phenotype
 
GRMZM2G411786
Liu, R et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa273     Reference: June 13th, 2020
Gene Product: December 27th, 2016
Variation: June 13th, 2020
Gene Model: June 13th, 2020
61 days agopprsmr1 pentatricopeptide repeat smr1: mutants have empty pericarp
2.02
   Wang, H-C et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00814   AT1G79490 (TAIR) Reference: June 12th, 2020
Gene Product: December 27th, 2016
Variation: July 1st, 2019
61 days agoemp6 empty pericarp6: mutant causes early arrest in grain development leading to an empty pericarp phenotype.similar to Arabidopsis ubiquitin thiolesterase
2.07
GRMZM2G048392
Wang, H-C et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00814     Reference: June 12th, 2020
Gene Product: July 4th, 2014
Variation: February 24th, 2017
Gene Model: February 24th, 2017
61 days agomcsf2 mitochondrial CAF-like splicing factor2:
4.04
GRMZM2G129615
Wang, H-C et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00814     Reference: June 12th, 2020
Gene Product: July 23rd, 2009
Gene Model: April 13th, 2020
61 days agomatl1 matrilineal1: encodes a pollen-specific phospholipase; novel edits lead to a 6.7% haploid induction rate
 
GRMZM2G471240
Chen, C et al. 2020. Plants 9:739     Reference: June 12th, 2020
Gene Product: June 12th, 2020
Variation: February 10th, 2017
Gene Model: January 25th, 2017
61 days agohma3 heavy metal ATPase3: associated with leaf Cd concentration under various Cd levels at seedling and maturing stages
 
GRMZM2G175576
Stich, B et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13823     Reference: June 12th, 2020
Gene Product: October 23rd, 2019
Variation: June 12th, 2020
Gene Model: January 27th, 2018
61 days agohma4 heavy metal ATPase4:
 
GRMZM2G455491
Stich, B et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13823     Reference: June 12th, 2020
Gene Product: October 23rd, 2019
Variation: June 12th, 2020
Gene Model: January 27th, 2018
61 days agomcsf1 mitochondrial CAF-like splicing factor1: mutants have empty pericarp
 
GRMZM2G087395
Wang, H-C et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00814     Reference: June 12th, 2020
Gene Product: July 23rd, 2009
Variation: July 1st, 2019
Gene Model: July 1st, 2019
61 days agomo1 molybdate transporter1: candidate for the natural genetic variation of Cd and Mo concentrations and contents in shoots
 
GRMZM2G083156
Stich, B et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13823     Reference: June 12th, 2020
Gene Product: June 12th, 2020
Variation: June 12th, 2020
Gene Model: June 12th, 2020
61 days agoppr14 pentatricopeptide repeat protein14: null mutations severely arrest the embryo and endosperm development, causing an empty pericarp phenotype
 
GRMZM2G106384
Wang, H-C et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00814     Reference: June 12th, 2020
Gene Product: December 27th, 2016
Variation: June 12th, 2020
Gene Model: June 12th, 2020
61 days agoppr167 pentatricopeptide repeat protein167:
 
GRMZM2G089959
Wang, H-C et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00814     Reference: June 12th, 2020
Gene Product: December 27th, 2016
Gene Model: June 12th, 2020
61 days agoppr237 pentatricopeptide repeat protein237:
 
GRMZM2G110483
Wang, H-C et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00814     Reference: June 12th, 2020
Gene Product: December 27th, 2016
Gene Model: June 12th, 2020
61 days agonad4(mtNB) NADH dehydrogenase subunit 4:
 
GRMZM5G804358
Liu, R et al. 2020. Int J Mol Sci 21:4047     Reference: June 5th, 2020
Gene Product: September 1st, 2003
Gene Model: June 12th, 2020
62 days agoglb1 globulin1: was prot1; electrophoretic mobility, null allele is known; embryo protein; SSRs phi011, 055, 094
1.09
   Lopez-Castillo, LM et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00781     Reference: June 11th, 2020
Gene Product: September 1st, 2003
Variation: January 29th, 2015
62 days agoglb2 globulin2: presence-absence
1.11
   Lopez-Castillo, LM et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00781     Reference: June 11th, 2020
Gene Product: September 1st, 2003
Variation: March 30th, 2009
62 days agoamo1 amine oxidase1: single copy rice cDNA rz69
10.04
GRMZM2G359298
Lopez-Castillo, LM et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00781     Reference: June 11th, 2020
Gene Product: September 1st, 2003
Gene Model: September 29th, 2015
62 days agoumc1118  :
1.11
GRMZM2G012224
Lopez-Castillo, LM et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00781     Reference: June 11th, 2020
Variation: September 21st, 2016
Gene Model: October 19th, 2017
62 days agoctb1 chitinase B1: cDNA sequence corresponds to protein sequence of maize chitinase B
10.04
GRMZM2G005633
Lopez-Castillo, LM et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00781     Reference: June 11th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: October 21st, 2018
62 days agoprx35 peroxidase35: responsible for the majority of the peroxidase activity of the kernel
 
GRMZM2G177792
Lopez-Castillo, LM et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00781     Reference: June 11th, 2020
Gene Product: September 18th, 2015
Gene Model: September 18th, 2015
63 days agopao4 polyamine oxidase4: similar to Arabidopsis putative polyamine oxidase 4
10.07
GRMZM2G150248
Jasso-Robles, FI et al. 2016. Plant Physiol Biochem 102:115-124     Reference: June 9th, 2020
Gene Product: June 10th, 2020
Gene Model: January 25th, 2018
63 days agopao1 polyamine oxidase1: cDNA and genomic clones, low copy numberplays an important role in tumor development during the maize-U. maydis interaction
10.03
GRMZM2G034152
Jasso-Robles, FI et al. 2016. Plant Physiol Biochem 102:115-124     Reference: June 9th, 2020
Gene Product: June 10th, 2020
Variation: October 7th, 2015
Gene Model: October 7th, 2015
63 days agopao6 polyamine oxidase6:
2.00
GRMZM2G078033
Jasso-Robles, FI et al. 2016. Plant Physiol Biochem 102:115-124     Reference: June 9th, 2020
Gene Product: June 10th, 2020
Gene Model: March 7th, 2020
63 days agopao2 polyamine oxidase2:
 
GRMZM2G000052
Jasso-Robles, FI et al. 2016. Plant Physiol Biochem 102:115-124     Reference: June 9th, 2020
Gene Product: June 10th, 2020
Gene Model: February 3rd, 2020
63 days agopao3 polyamine oxidase3:
 
GRMZM2G396856
Jasso-Robles, FI et al. 2016. Plant Physiol Biochem 102:115-124     Reference: June 9th, 2020
Gene Product: June 10th, 2020
Gene Model: June 9th, 2020
63 days agopao5 polyamine oxidase5:
 
GRMZM2G035994
Pakdel, H et al. 2020. J Biosciences 45:73     Reference: June 9th, 2020
Gene Product: June 10th, 2020
Gene Model: June 9th, 2020
63 days agoIDP689  :
8.05
GRMZM2G141922
    Variation: March 31st, 2005
Gene Model: June 10th, 2020
64 days agodcl102 dicer-like 102: mutants have few or no 24-nt phasiRNAs; plants are temperature-sensitive male sterile
1.07
GRMZM2G413853
Teng, C et al. 2020. Nature communications 11:2912     Reference: June 9th, 2020
Gene Product: September 5th, 2006
Variation: June 9th, 2020
Gene Model: January 29th, 2015
65 days agocenH3 centromeric histone H3:
6.06
GRMZM2G158526
Jacquier, NMA et al. 2020. Nature Plants pp.doi: 10.1038/s41477-020-0664-9     Reference: June 8th, 2020
Gene Product: December 24th, 2015
Variation: November 7th, 2012
Gene Model: October 24th, 2011
67 days agogdh1 glutamic dehydrogenase1: electrophoretic mobility; null allele is known (cold sensitivity); intra/interlocus hybrid bands occur - merge with GenBank sequences inferred by overgo map location matches
1.11
   Dong, M-Y et al. 2020. Planta 252:doi: 10.1007/s00425-020-03403-4     Reference: June 6th, 2020
Gene Product: September 1st, 2003
Variation: August 7th, 2006
67 days agohsftf22 HSF-transcription factor 22: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to heat stress transcription factor A-1b of A. thaliana
 
   Dong, M-Y et al. 2020. Planta 252:doi: 10.1007/s00425-020-03403-4     Reference: June 6th, 2020
Gene Product: May 15th, 2020
67 days agowrky16 WRKY-transcription factor 16: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.08
GRMZM2G063216
Dong, M-Y et al. 2020. Planta 252:doi: 10.1007/s00425-020-03403-4     Reference: June 6th, 2020
Gene Product: July 24th, 2017
Gene Model: December 6th, 2016
67 days agoprp7 pathogenesis-related protein7:
1.03
GRMZM2G112524
Dong, M-Y et al. 2020. Planta 252:doi: 10.1007/s00425-020-03403-4     Reference: June 6th, 2020
Gene Product: July 25th, 2018
Gene Model: September 30th, 2017
67 days agobrd1 brassinosteroid-deficient dwarf1: Mutant plants have essentially no internode elongation and exhibit no etiolation response when germinated in the dark.
 
GRMZM2G103773
Dong, M-Y et al. 2020. Planta 252:doi: 10.1007/s00425-020-03403-4     Reference: June 6th, 2020
Gene Product: February 18th, 2012
Variation: August 16th, 2019
Gene Model: February 15th, 2012
67 days agopan2 pangloss2: Defines polarization in divisions of subsidiary mother cells at guard cells
 
GRMZM2G034572
Dong, M-Y et al. 2020. Planta 252:doi: 10.1007/s00425-020-03403-4     Reference: June 6th, 2020
Gene Product: November 27th, 2012
Variation: November 27th, 2012
Gene Model: November 27th, 2012
67 days agocry3 cryptochrome3: a homolog of CRY2, encoding cryptochrome-2, a photoreceptor regulated by blue light and involved in floral initiation (Li et al., 2018)
 
GRMZM2G172152
Dong, M-Y et al. 2020. Planta 252:doi: 10.1007/s00425-020-03403-4     Reference: June 6th, 2020
Gene Product: August 31st, 2018
Gene Model: August 31st, 2018
67 days agolrl3 ljrhl1-like3:
5.08
GRMZM5G832135
Dong, M-Y et al. 2020. Planta 252:doi: 10.1007/s00425-020-03403-4   AT5G58010 (TAIR) Reference: June 6th, 2020
Gene Product: September 14th, 2016
Gene Model: December 17th, 2018
67 days agoIDP144  :
8.03
GRMZM2G154278
    Variation: March 31st, 2005
Gene Model: June 6th, 2020
67 days agoIDP88  :
8.03
GRMZM2G074103
    Variation: March 31st, 2005
Gene Model: June 6th, 2020
68 days agopor2 porin2: cDNA similar to plant tonoplast aquaporins; SSR umc1061
10.06
GRMZM2G125023
Moisseyev, G et al. 2020. Database (Oxford) 2020:baaa038     Reference: June 5th, 2020
Gene Product: September 1st, 2003
Variation: January 29th, 2011
Gene Model: February 5th, 2015
68 days agotip2a tonoplast intrinsic protein2:
4.06
GRMZM2G027098
Moisseyev, G et al. 2020. Database (Oxford) 2020:baaa038     Reference: June 5th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: February 5th, 2015
68 days agotip5 tonoplast intrinsic protein5: cDNA sequence similar to tonoplast aquaporin; SSR umc2122
10.06
GRMZM2G125023
Moisseyev, G et al. 2020. Database (Oxford) 2020:baaa038     Reference: June 5th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: February 5th, 2015
68 days agoppr18 pentatricopeptide repeat protein18: mutants impair the splicing of nad4 intron 1
 
GRMZM2G438456
Liu, R et al. 2020. Int J Mol Sci 21:4047     Reference: June 5th, 2020
Gene Product: December 27th, 2016
Variation: June 5th, 2020
Gene Model: June 5th, 2020
69 days agoarr1 ARR-B-transcription factor 1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, BB, et al. 2020. Nature Genetics. 0:doi: 10.1038/s41588-020-0616-3     Reference: June 4th, 2020
Gene Product: June 30th, 2017
69 days agosbp18 SBP-transcription factor 18: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, BB, et al. 2020. Nature Genetics. 0:doi: 10.1038/s41588-020-0616-3     Reference: June 4th, 2020
Gene Product: July 5th, 2019
69 days agopip1a plasma membrane intrinsic protein1:
2.03
GRMZM2G174807
Ding, L, et al. 2020. Plant Physiol. 0:doi; 10.1104/pp.19.01183     Reference: June 4th, 2020
Gene Product: September 1st, 2003
Variation: June 6th, 2005
Gene Model: October 29th, 2014
69 days agopip1b plasma membrane intrinsic protein1:
5.06
   Ding, L, et al. 2020. Plant Physiol. 0:doi; 10.1104/pp.19.01183     Reference: June 4th, 2020
Gene Product: September 1st, 2003
Variation: April 26th, 2016
69 days agopip2a plasma membrane intrinsic protein2:
2.03
   Ding, L, et al. 2020. Plant Physiol. 0:doi; 10.1104/pp.19.01183     Reference: June 4th, 2020
Gene Product: September 1st, 2003
Variation: January 25th, 2020
69 days agopip1d plasma membrane intrinsic protein1: differs in nucleotide sequence from pip1c but encodes the same protein.
4.06
GRMZM2G392975
Ding, L, et al. 2020. Plant Physiol. 0:doi; 10.1104/pp.19.01183     Reference: June 4th, 2020
Gene Product: September 1st, 2003
Variation: October 29th, 2014
Gene Model: October 29th, 2014
69 days agopip1e plasma membrane intrinsic protein1:
4.06
   Ding, L, et al. 2020. Plant Physiol. 0:doi; 10.1104/pp.19.01183     Reference: June 4th, 2020
Gene Product: September 1st, 2003
Variation: October 24th, 2014
69 days agopip1f plasma membrane intrinsic protein1:
9.01
GRMZM2G136032
Ding, L, et al. 2020. Plant Physiol. 0:doi; 10.1104/pp.19.01183     Reference: June 4th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: January 25th, 2020
69 days agopip2e plasma membrane intrinsic protein2:
7.02
   Ding, L, et al. 2020. Plant Physiol. 0:doi; 10.1104/pp.19.01183     Reference: June 4th, 2020
Gene Product: September 1st, 2003
Variation: June 6th, 2005
69 days agopip2b plasma membrane intrinsic protein2:
2.06
   Ding, L, et al. 2020. Plant Physiol. 0:doi; 10.1104/pp.19.01183     Reference: June 4th, 2020
Gene Product: September 1st, 2003
Variation: March 19th, 2013
69 days agopip2c plasma membrane intrinsic protein2:
4.06
   Ding, L, et al. 2020. Plant Physiol. 0:doi; 10.1104/pp.19.01183     Reference: June 4th, 2020
Gene Product: September 1st, 2003
Variation: March 25th, 2013
69 days agopip2d plasma membrane intrinsic protein2: member of the aquaporin family
5.05
   Ding, L, et al. 2020. Plant Physiol. 0:doi; 10.1104/pp.19.01183     Reference: June 4th, 2020
Gene Product: September 1st, 2003
Variation: March 7th, 2007
69 days agopip2f plasma membrane intrinsic protein2:
7.02
   Ding, L, et al. 2020. Plant Physiol. 0:doi; 10.1104/pp.19.01183     Reference: June 4th, 2020
Gene Product: September 1st, 2003
Variation: March 26th, 2013
69 days agome8 NAD-dependent malic enzyme8: White and red light decreased the quantity of mRNA, while far-red light led to the increase of its transcripts
 
GRMZM2G085747
Eprintsev, AT et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153193     Reference: June 4th, 2020
Gene Product: June 4th, 2020
Gene Model: June 4th, 2020
69 days agome9 NAD-dependent malic enzyme9: White and red light increased the quantity of mRNA, while far-red light led to the decrease of its transcripts
7.03
GRMZM2G406672
Eprintsev, AT et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153193     Reference: June 4th, 2020
Gene Product: June 4th, 2020
Gene Model: June 4th, 2020
70 days agonad5 (mito) NADH dehydrogenase subunit 5:
 
   Yang, H-H et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00732     Reference: June 3rd, 2020
Gene Product: September 1st, 2003
70 days agoppr101 pentatricopeptide repeat potein101: Loss-of-function mutation impairs seed development
 
GRMZM2G023999
Yang, H-H et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00732     Reference: June 3rd, 2020
Gene Product: December 27th, 2016
Variation: June 3rd, 2020
Gene Model: June 3rd, 2020
70 days agoppr231 pentatricopeptide repeat potein231: Loss-of-function mutation impairs seed development
 
GRMZM2G018757
Yang, H-H et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00732     Reference: June 3rd, 2020
Gene Product: December 27th, 2016
Variation: June 3rd, 2020
Gene Model: June 3rd, 2020
71 days agondhB-II (cp) nicotinamide adenine dinucleotide dehydrogenaseB2: ndhB-II 9(cp) is a duplication of ndhB-I (cp); see ndhB-I (cp) entry for complete information
 
GRMZM5G810298
Huang, J et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00374     Reference: June 2nd, 2020
Gene Product: September 1st, 2003
Gene Model: June 2nd, 2020
71 days agondhB-I (cp) nicotinamide adenine dinucleotide dehydrogenaseB1: Maier et al, 1992, contains an analysis of RNA editing sites as regarding a "consensus" recognition site for editing across organisms and genomes.
 
GRMZM5G876106
Huang, J et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00374     Reference: June 2nd, 2020
Gene Product: September 1st, 2003
Gene Model: June 2nd, 2020
71 days agokw9 kernel weight9: Involved in kernel weight variation
 
GRMZM2G171994
Huang, J et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00374     Reference: June 2nd, 2020
Gene Product: December 27th, 2016
Gene Model: June 2nd, 2020
72 days agoms23 male sterile23: pollen mother cells degeneratedominant Rf4 restores fertility to cms-C; complementary with Rf5 and Rf6
8.01 - 8.02
GRMZM2G021276
Zheng, MM et al. 2020. G3 pp.doi: 10.1534/g3.120.401192     Reference: June 1st, 2020
Gene Product: September 14th, 2016
Variation: September 6th, 2019
Gene Model: December 4th, 2016
72 days agosbei1 starch branching enzyme IIb interacting protein1: knocking out this and sbei2 genes using the CRISPR/Cas9 system could effectively increase the apparent amylose content but maintain the maize kernel weight.
 
GRMZM2G089553
Chen, C et al. 2020. Can J Plant Sci pp.doi: 10.1139/CJPS-2019-0219     Reference: June 1st, 2020
Gene Product: June 1st, 2020
Gene Model: June 1st, 2020
72 days agosbei2 starch branching enzyme IIb interacting protein2: knocking out this and sbei1 genes using the CRISPR/Cas9 system could effectively increase the apparent amylose content but maintain the maize kernel weight.
 
GRMZM2G091494
Chen, C et al. 2020. Can J Plant Sci pp.doi: 10.1139/CJPS-2019-0219     Reference: June 1st, 2020
Gene Product: June 1st, 2020
Gene Model: June 1st, 2020
74 days agophd5 PHD-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
4.10
GRMZM2G057265
Yilmaz, A et al. 2009. Plant Physiol 149:171-180     Reference: May 12th, 2011
Gene Product: July 8th, 2017
Variation: September 25th, 2007
Gene Model: May 30th, 2020
75 days agoAY104784  :
4.08
GRMZM2G179737
    Variation: March 2nd, 2007
Gene Model: May 29th, 2020
75 days agoAY107128  :
4.05
GRMZM2G145951
    Variation: September 25th, 2007
Gene Model: May 29th, 2020
78 days agotrps1 trehalose-6-phosphate synthase1:
 
GRMZM2G068943
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: September 15th, 2013
Gene Model: May 28th, 2012
78 days agotrpp8 trehalose-6-phosphate phosphatase8:
 
GRMZM2G174396
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
78 days agotrpp12 trehalose-6-phosphate phosphatase12:
 
GRMZM2G178546
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
78 days agotrps4 trehalose-6-phosphate synthase4:
 
GRMZM2G008226
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
78 days agotrps5 trehalose-6-phosphate synthase5:
 
GRMZM2G527891
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
78 days agotrps7 trehalose-6-phosphate synthase7:
 
GRMZM2G123277
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
78 days agotrps9 trehalose-6-phosphate synthase9:
 
GRMZM2G366659
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
78 days agotrps10 trehalose-6-phosphate synthase10:
 
GRMZM2G312521
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
78 days agotrps11 trehalose-6-phosphate synthase11:
 
GRMZM2G122231
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
78 days agotrps13 trehalose-6-phosphate synthase13:
 
GRMZM2G019183
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
78 days agotrps15 trehalose-6-phosphate synthase15:
 
GRMZM2G118462
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
78 days agotrpp6 trehalose-6-phosphate phosphatase6: similar to Arabidopsis haloacid dehalogenase-like hydrolase domain-containing protein
5.06
GRMZM2G112830
Liang, X-G et al. 2020. J Plant Physiol pp.doi: 10.1016/j.jplph.2020.153194     Reference: May 26th, 2020
Gene Product: September 15th, 2013
Gene Model: February 7th, 2018
78 days agoIDP217  :
5.09
GRMZM2G143627
    Variation: March 31st, 2005
Gene Model: May 26th, 2020
79 days agodek55 defective kernel55: Enclodes a Mitochondrial E-subgroup PPR Protein
 
AC201815.4_FG001
Ren, RC et al. 2020. BMC Plant Biology pp.doi: 10.21203/rs.3.rs-26875/v1     Reference: May 25th, 2020
Gene Product: December 27th, 2016
Variation: May 25th, 2020
Gene Model: May 25th, 2020
80 days agoumc1375  :
5.07
GRMZM2G118366
    Variation: September 1st, 2003
Gene Model: May 24th, 2020
80 days agocl17982_1a  :
5.06
GRMZM5G832989
    Variation: September 25th, 2007
Gene Model: May 24th, 2020
80 days agoIDP3821  :
5.06
GRMZM2G385999
    Variation: March 31st, 2005
Gene Model: May 24th, 2020
81 days agoumc1028  :
2.05
GRMZM2G115658
Trevisan, S et al. 2020. Plant Growth Regulation pp.doi: 10.1007/s10725-020-00626-z     Reference: May 23rd, 2020
Variation: September 1st, 2003
Gene Model: February 15th, 2018
81 days agocol5 C2C2-CO-like-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G075562
Shalmani, A et al. 2019. BMC Genomics 20:27     Reference: January 10th, 2019
Gene Product: June 18th, 2018
Gene Model: May 23rd, 2020
81 days agoembp1 EM binding protein1 homologue: bZIP protein binds to O2 box; wheat EM orthologue
7.02
GRMZM2G095078
Perveen, S et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa248     Reference: May 23rd, 2020
Gene Product: August 21st, 2018
Variation: September 5th, 2018
Gene Model: September 5th, 2018
81 days agoks1 kaurene synthase1:
 
GRMZM2G016922
Trevisan, S et al. 2020. Plant Growth Regulation pp.doi: 10.1007/s10725-020-00626-z     Reference: May 23rd, 2020
Gene Product: August 16th, 2012
Gene Model: October 27th, 2014
81 days agoga2ox12 gibberellin 2-oxidase12:
 
GRMZM2G177104
Trevisan, S et al. 2020. Plant Growth Regulation pp.doi: 10.1007/s10725-020-00626-z     Reference: May 23rd, 2020
Gene Product: October 27th, 2014
Gene Model: October 30th, 2014
81 days agopco087990  :
5.06
GRMZM2G108087
    Variation: September 25th, 2007
Gene Model: May 23rd, 2020
81 days agoIDP737  :
5.07
GRMZM2G339943
    Variation: March 31st, 2005
Gene Model: May 23rd, 2020
81 days agoIDP89  :
5.06
GRMZM2G029029
    Variation: March 31st, 2005
Gene Model: May 23rd, 2020
82 days agoaasr1 abscisic acid stress ripening1: protects the major ARS protein in maize; protects kernel yield under water deficit; SSR pio059, IDP9044
10.02
GRMZM2G136910
Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: January 2nd, 2019
Variation: December 30th, 2011
Gene Model: November 1st, 2011
82 days agofbn1 fibrillin1: leaf cDNA csu653, moderate copy number, similar to plastid protein
1.05
GRMZM2G003318
Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: July 27th, 2016
82 days agomdh1 malate dehydrogenase1: electrophoretic mobility; null allele is known; mitochondrial; dimeric; intra/interlocus hybrid bands occur
8.03
   Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
82 days agomdh2 malate dehydrogenase2: electrophoretic mobility; null allele is known; mitochondrial; dimeric; intra/interlocus hybrid bands occur
6.07
   Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
82 days agomdh4 malate dehydrogenase4: electrophoretic mobility; null allele is known; cytosolic; dimeric; intra/interlocus hybrid bands occur; probed by csu77
1.08
   Chen, YQ et al. 2020. Plant Biotechnol J pp.doi: 10.1111/pbi.13416     Reference: May 21st, 2020
Gene Product: September 1st, 2003
Variation: May 22nd, 2020
82 days agoumc1995  :
10.04
GRMZM2G343291
Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Variation: September 1st, 2003
Gene Model: December 15th, 2017
82 days agobgaf1 beta glucosidase aggregating factor1:
7.02
GRMZM2G172204
Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: September 1st, 2003
Variation: October 23rd, 2013
Gene Model: October 24th, 2011
82 days agogst41 glutathione transferase41:
6.05
GRMZM2G097989
Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2010
Gene Model: July 27th, 2016
82 days agopsbD (cp)  :
 
   Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: September 1st, 2003
82 days agonad1 NADH ubiquinone oxidoreductase1: endosperm cDNA 5C05D10 (uaz266), similar to a NADH-ubiquinone oxidoreductase subunit
1.03
GRMZM2G018941
Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: March 4th, 2016
82 days agomstr1 monosaccharide transporter1:
7.00
GRMZM2G135739
Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Variation: July 14th, 2008
Gene Model: September 17th, 2015
82 days agoimd2 isopropylmalate dehydrogenase2:
 
GRMZM5G803490
Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: September 1st, 2003
Variation: July 22nd, 2014
Gene Model: July 22nd, 2014
82 days agopld5 phospholipase D5:
 
GRMZM2G442551
Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: August 9th, 2016
Gene Model: August 9th, 2016
82 days agoIDP2361  :
5.05
GRMZM2G112352
    Variation: March 31st, 2005
Gene Model: May 22nd, 2020
82 days agoIDP758  :
5.05
GRMZM2G061938
    Variation: March 31st, 2005
Gene Model: May 22nd, 2020
82 days agogpm480  :
4.02
GRMZM2G138907
Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Variation: September 25th, 2007
Gene Model: April 11th, 2020
82 days agopco093974b  :
5.03
GRMZM2G053236
Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: June 3rd, 2014
Gene Model: May 9th, 2013
82 days agopsei3 cystatin3:
6.06
GRMZM2G440968
Zenda, T et al. 2018. Int J Mol Sci 19:3225     Reference: May 22nd, 2020
Gene Product: April 21st, 2008
Variation: February 24th, 2009
Gene Model: July 28th, 2016
83 days agoms45 male sterile45: abnormal microspore wall formation, tassel specific, cDNA clone
9.06
   Wan, XY et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.05.009     Reference: May 21st, 2020
Gene Product: June 27th, 2014
Variation: June 27th, 2014
83 days agoms33 male sterile33:
2.09
GRMZM2G070304
Wan, XY et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.05.009   LOC_Os11g45400 (MSU/TIGR) Reference: May 21st, 2020
Gene Product: March 25th, 2019
Variation: December 4th, 2018
Gene Model: March 17th, 2018
83 days agoms20 male sterile20: mutants are male sterile and exhibit a glossy outer anther surface, abnormal Ubish bodies, and defective pollen exinedegeneration obvious by mid-vacuolated microspore stage
1.00 - 1.05
GRMZM2G434500
Wan, XY et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.05.009   AT1G12570 (TAIR) Reference: May 21st, 2020
Gene Product: November 16th, 2016
Variation: March 20th, 2019
Gene Model: November 16th, 2016
83 days agobm3 brown midrib3: like bm1; has lowered activity of caffeic acid O-methyl transferase; application: modified lignin has improved digestibility in ruminants; silage corn with bm3 is in production. However, bm3 results in weaker stalks, reduced stover and grain yield, and in some cases reduced maturity; these effects appear genotype-specific
4.04
GRMZM5G814904
Wu, ZY et al. 2018. J Exp Bot pp.doi: 10.1093/jxb/ery208     Reference: June 4th, 2018
Gene Product: February 16th, 2011
Variation: October 27th, 2015
Gene Model: May 21st, 2020
83 days agomdh3 malate dehydrogenase3: electrophoretic mobility; null allele is known; mitochondrial; dimeric; intra/interlocus hybrid bands occur
3.08
GRMZM2G466833
Chen, YQ et al. 2020. Plant Biotechnol J pp.doi: 10.1111/pbi.13416     Reference: May 21st, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 30th, 2015
83 days agomdh5 malate dehydrogenase5: electrophoretic mobility, null allele is known; cytosolic; dimeric, intra/interlocus hybrid bands occur; cDNA csu249 single copy
5.03
   Chen, YQ et al. 2020. Plant Biotechnol J pp.doi: 10.1111/pbi.13416     Reference: May 21st, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
83 days agoms10 male sterile10: like ms5; affected at microspore vacuolationsimilar to Arabidopsis cytochrome P450, family 703, subfamily A, polypeptide 2
10.04 - 10.05
GRMZM5G830329
Wan, XY et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.05.009   AT1G01280 (TAIR)
LOC_Os08g03682 (MSU/TIGR)
Reference: May 21st, 2020
Gene Product: January 20th, 2017
Variation: January 19th, 2017
Gene Model: January 19th, 2017
83 days agoms44 male sterile44: dominant Ms44 plants male sterile
4.08
AC225127.3_FG003
Wan, XY et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.05.009     Reference: May 21st, 2020
Gene Product: September 1st, 2003
Variation: January 6th, 2017
Gene Model: January 6th, 2017
83 days agots5 tassel seed5: dominant Ts5 tassels are upright with scattered, short silks; branches mostly pistillate toward the base
4.03 - 4.05
GRMZM2G177668
Wan, XY et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.05.009     Reference: May 21st, 2020
Gene Product: March 25th, 2019
Variation: March 25th, 2019
Gene Model: March 25th, 2019
83 days agoms30 male sterile30: like ms1
4.08
GRMZM2G174782
Wan, XY et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.05.009     Reference: May 21st, 2020
Gene Product: January 25th, 2019
Variation: January 25th, 2019
Gene Model: January 25th, 2019
83 days agomdh6 malate dehydrogenase6: mesophyll cells, C4 photosynthesis; a second copy may not function in photosynthesis
1.07
GRMZM2G129513
Chen, YQ et al. 2020. Plant Biotechnol J pp.doi: 10.1111/pbi.13416     Reference: May 21st, 2020
Gene Product: September 23rd, 2014
Variation: August 31st, 2010
Gene Model: October 24th, 2013
83 days agokcs3 3-ketoacyl-CoA synthase3:
 
GRMZM2G075140
Wan, XY et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.05.009     Reference: May 21st, 2020
Gene Product: November 1st, 2018
Gene Model: February 13th, 2020
83 days agoIDP290  :
5.05
GRMZM2G398500
    Variation: March 31st, 2005
Gene Model: May 21st, 2020
83 days agoIDP335  :
5.05
GRMZM2G171406
    Variation: March 31st, 2005
Gene Model: May 21st, 2020
84 days agogte102 global transcription factor group E:
5.05
GRMZM2G006707
    Variation: September 1st, 2003
Gene Model: May 20th, 2020
84 days agotil2 temperature-induced lipocalin2:
1.07
GRMZM2G124307
Charron, J-BF et al. 2005. Plant Physiol 139:2017-2028     Reference: May 20th, 2020
Gene Product: May 20th, 2020
Gene Model: February 12th, 2020
84 days agopht1 phosphate transporter protein1:
5.03
GRMZM2G326707
Wang, F et al. 2020. Plant Biotechnol J pp.doi: 10.1111/pbi.13414     Reference: May 20th, 2020
Gene Product: June 16th, 2016
Variation: February 4th, 2011
Gene Model: May 27th, 2015
84 days agopht2 phosphate transporter protein2:
1.08
GRMZM2G154090
Wang, F et al. 2020. Plant Biotechnol J pp.doi: 10.1111/pbi.13414     Reference: May 20th, 2020
Gene Product: June 16th, 2016
Variation: February 4th, 2011
Gene Model: May 27th, 2015
84 days agopht3 phosphate transporter protein3: similar to Arabidosis inorganic phosphate transporter 1-4
 
GRMZM2G045473
Wang, F et al. 2020. Plant Biotechnol J pp.doi: 10.1111/pbi.13414     Reference: May 20th, 2020
Gene Product: June 16th, 2016
Variation: December 28th, 2010
Gene Model: May 27th, 2015
84 days agopht4 phosphate transporter protein4:
10.04
GRMZM2G159075
Wang, F et al. 2020. Plant Biotechnol J pp.doi: 10.1111/pbi.13414     Reference: May 20th, 2020
Gene Product: June 16th, 2016
Variation: July 14th, 2008
Gene Model: May 27th, 2015
84 days agoeil3 ethylene insensitive-like3:
1.04
GRMZM2G033570
Yang, Z et al. 2020. Plant Cell Environ pp.doi: 10.1111/pce.13803     Reference: May 20th, 2020
Variation: August 6th, 2008
Gene Model: August 29th, 2013
84 days agopht10 phosphate transporter protein10:
 
GRMZM2G075870
Wang, F et al. 2020. Plant Biotechnol J pp.doi: 10.1111/pbi.13414     Reference: May 20th, 2020
Gene Product: June 16th, 2016
Gene Model: June 16th, 2016
84 days agogll1 glossy2-like1: strong homology to maize gl2 and Arabidopsis cer2.
 
GRMZM2G315767
Alexander, LE et al. 2020. Plant Physiol pp.doi: 10.1104/pp.20.00241   AT4G13840 (TAIR) Reference: May 20th, 2020
Gene Product: February 28th, 2020
Gene Model: February 28th, 2020
84 days agoIDP2140  :
5.05
GRMZM2G128902
    Variation: March 31st, 2005
Gene Model: May 20th, 2020
84 days agotil1 temperature-induced lipocalin1:
5.05
GRMZM2G072034
Charron, J-BF et al. 2005. Plant Physiol 139:2017-2028     Reference: May 20th, 2020
Gene Product: May 20th, 2020
Gene Model: May 20th, 2020
85 days agoumc1687  :
5.05
GRMZM2G029922
    Variation: September 1st, 2003
Gene Model: May 19th, 2020
85 days agopht5 phosphate transporter protein5:
 
GRMZM2G041595
Li, WD et al. 2020. Planta 251:106     Reference: May 19th, 2020
Gene Product: June 16th, 2016
Gene Model: September 13th, 2018
85 days agoIDP333  :
5.05
GRMZM2G056988
    Variation: March 31st, 2005
Gene Model: May 19th, 2020
86 days agocct1 CO CO-LIKE TIMING OF CAB1 protein domain1: photoperiod response locus; confers later flowering in teosintes under longer day lengths; many maize inbred lines, including some adapted to tropical regions, have cct1 alleles insensitive to photoperiod (Hung et al 2012)
 
GRMZM2G381691
Cui, ZH et al. 2020. Sci. Rep. 10:8165   AT5G24930 (TAIR)
LOC_Os07g15770 (MSU/TIGR)
Os07g0261200 (Gramene)
Reference: May 18th, 2020
Gene Product: June 18th, 2018
Variation: December 27th, 2017
Gene Model: July 17th, 2012
86 days agoAY105205  :
5.04
GRMZM2G135691
    Variation: September 25th, 2007
Gene Model: May 18th, 2020
88 days agoIDP1623  :
5.04
GRMZM2G167356
    Variation: March 31st, 2005
Gene Model: May 16th, 2020
88 days agoIDP207  :
5.04
GRMZM2G109315
    Variation: March 31st, 2005
Gene Model: May 16th, 2020
88 days agoIDP359  :
5.04
GRMZM2G060167
    Variation: March 31st, 2005
Gene Model: May 16th, 2020
89 days agors1 rough sheath1: shoot meristem and developing stem specific; dominant Rs1 plants have extreme ligule disorganization (aka kn2)
7.00
GRMZM2G028041
Chen, QY et al. 2020. PLoS Genetics 16:e1008791     Reference: May 15th, 2020
Gene Product: September 30th, 2015
Variation: November 18th, 2013
Gene Model: September 30th, 2015
89 days agors2 rough sheath2: short, zigzag plants with warty, distorted sheaths and leaves
1.05
   Chen, QY et al. 2020. PLoS Genetics 16:e1008791     Reference: May 15th, 2020
Gene Product: September 1st, 2003
Variation: May 9th, 2009
89 days agohstf2 heat shock transcription factor2: pollen cDNA similar to eucaryotic heat shock factor
8.09
GRMZM2G118453
Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
Variation: December 23rd, 2012
Gene Model: July 28th, 2016
89 days agohstf1 heat shock transcription factor1: embryo cDNA similar to eucaryotic heat shock factor; multiple copies; gene-specific primers
 
   Gagliardi, D et al. 1995. Plant Mol Biol 29:841-856     Reference: September 1st, 2003
Gene Product: May 15th, 2020
89 days agohstf3 heat shock transcription factor 3: pollen cDNA similar to eucaryotic heat shock factor
 
   Gagliardi, D et al. 1995. Plant Mol Biol 29:841-856     Reference: September 1st, 2003
Gene Product: May 15th, 2020
89 days agoumc1283  :
5.04
GRMZM2G094353
    Variation: September 1st, 2003
Gene Model: May 15th, 2020
89 days agohsftf1 HSF-transcription factor 1: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
89 days agohsftf10 HSF-transcription factor 10: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
89 days agohsftf12 HSF-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
89 days agohsftf13 HSF-transcription factor 13: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
89 days agohsftf14 HSF-transcription factor 14: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to heat stress transcription factor A-2 of A. thaliana
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
89 days agohsftf15 HSF-transcription factor 15: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
89 days agohsftf16 HSF-transcription factor 16: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
89 days agohsftf17 HSF-transcription factor 17: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
89 days agohsftf18 HSF-transcription factor 18: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
89 days agohsftf2 HSF-transcription factor 2: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
89 days agohsftf20 HSF-transcription factor 20: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
89 days agohsftf21 HSF-transcription factor 21: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
89 days agohsftf24 HSF-transcription factor 24: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
89 days agohsftf25 HSF-transcription factor 25: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
89 days agohsftf27 HSF-transcription factor 27: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
89 days agohsftf28 HSF-transcription factor 28: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
89 days agohsftf29 HSF-transcription factor 29: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to heat stress transcription factor A-5 of A. thaliana
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
89 days agohsftf3 HSF-transcription factor 3: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to heat stress transcription factor A-6b of A. thaliana
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
89 days agohsftf4 HSF-transcription factor 4: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
89 days agohsftf5 HSF-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to heat stress transcription factor A-1b of A. thaliana
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
89 days agohsftf6 HSF-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
89 days agohsftf7 HSF-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.similar to heat stress transcription factor B-2b of A. thaliana
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
89 days agohsftf8 HSF-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. similar to heat stress transcription factor B-2b of A. thaliana
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
89 days agohsftf9 HSF-transcription factor 9: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
89 days agotrpp4 trehalose-6-phosphate phosphatase4: double mutants with ra3 give a more extreme phenotype
4.08
GRMZM2G151044
Chen, QY et al. 2020. PLoS Genetics 16:e1008791     Reference: May 15th, 2020
Gene Product: September 15th, 2013
Variation: April 2nd, 2019
Gene Model: June 7th, 2018
89 days agohsftf31 HSF-transcription factor 31:
 
GRMZM2G051448
Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
Gene Model: May 15th, 2020
89 days agohsftf30 HSF-transcription factor 30:
 
   Zhang, H-N et al. 2020. Sci. Rep. 10:8073     Reference: May 15th, 2020
Gene Product: May 15th, 2020
90 days agocdj3 chaperone DNA J3: NCBI: putative dnaJ chaperone family protein
5.03
GRMZM2G134980
Wu, YB et al. 2020. BMC Genomics 21:357     Reference: May 14th, 2020
Variation: March 24th, 2017
Gene Model: March 24th, 2017
90 days agoumc1110  :
5.04
GRMZM2G382914
    Variation: September 1st, 2003
Gene Model: May 14th, 2020
90 days agobhlh86 bHLH-transcription factor 86: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
7.03
GRMZM5G818643
Wu, YB et al. 2020. BMC Genomics 21:357     Reference: May 14th, 2020
Variation: September 1st, 2003
Gene Model: September 2nd, 2018
90 days agoadf7 actin depolymerizing factor7:
 
GRMZM2G463471
Wu, YB et al. 2020. BMC Genomics 21:357     Reference: May 14th, 2020
Gene Product: March 4th, 2020
Gene Model: March 4th, 2020
90 days agopco096212  :
5.04
GRMZM2G322129
    Variation: September 25th, 2007
Gene Model: May 14th, 2020
91 days agovpp2 vacuolar proton pump2: etiolated leaf cDNA, 5' sequence similar to plant vacuolar ATPase, subunit B
9.03
GRMZM2G094497
Zhang, YS et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00457     Reference: May 13th, 2020
Gene Product: September 1st, 2003
Variation: May 15th, 2015
Gene Model: May 15th, 2015
91 days agovpp1 vacuolar proton pump homolog1: glucose-starved root tip cDNA closely similar to Oryza gene (TIGR match)
6.04
GRMZM2G148200
Zhang, YS et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00457     Reference: May 13th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: August 25th, 2018
91 days agobrk3 brick3: Involved in formation of epidermal cell lobes as well as for properly polarized divisions of stomatal subsidiary mother cells.
10.01 - 10.02
GRMZM2G180150
Wang, YC et al. 2020. BMC Genomics 21:353   AT2G35110 (TAIR)
Os08G0544500 (Gramene)
Reference: May 13th, 2020
Gene Product: August 12th, 2015
Variation: August 12th, 2015
Gene Model: August 11th, 2015
91 days agonnr2 nitrate reductase2: partial cDNA from seedling root cDNA similar to nitrate reductase
5.07
GRMZM5G878558
Wang, YC et al. 2020. BMC Genomics 21:353     Reference: May 13th, 2020
Gene Product: September 1st, 2003
Variation: October 26th, 2010
Gene Model: May 10th, 2018
91 days agonlp6 NLP-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, YC et al. 2020. BMC Genomics 21:353     Reference: May 13th, 2020
Gene Product: December 3rd, 2019
91 days agocsu36b(rpL19)  :
5.04
GRMZM5G887054
Keith, CS et al. 1993. Plant Physiol 101:329-332     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Gene Model: May 13th, 2020
91 days agogln4 glutamine synthetase4: cytosolic GS1-3 isoform, major species in both root and leaf, gene specific cDNA probes, 6-member nuclear gene family; SSR phi085
5.06
   Wang, YC et al. 2020. BMC Genomics 21:353     Reference: May 13th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
91 days agonii2 nitrite reductase2: cDNA homologous to spinach gene, induced by nitrate, putative chloroplast transit peptide, two copies
4.07
GRMZM2G079381
Wang, YC et al. 2020. BMC Genomics 21:353     Reference: May 13th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 10th, 2014
91 days agorboh1 respiratory burst oxidase1: mutant displays defects in root hair initiation and elongation manifested by a reduced density and length of root hairs.
3.06
GRMZM2G426953
Zhang, YS et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00457     Reference: May 13th, 2020
Gene Product: July 15th, 2013
Variation: June 7th, 2014
Gene Model: July 2nd, 2013
91 days agorboh3 respiratory burst oxidase3:
 
GRMZM2G043435
Zhang, YS et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00457     Reference: May 13th, 2020
Gene Product: July 15th, 2013
Gene Model: July 2nd, 2013
91 days agonrt1 nitrate transport1:
 
GRMZM2G010251
Wang, YC et al. 2020. BMC Genomics 21:353     Reference: May 13th, 2020
Gene Product: September 1st, 2003
Gene Model: September 10th, 2014
91 days agonhx1 Na+/H+ antiporter 1: root-specific and NaCl-specific expression.
 
   Zhang, YS et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00457     Reference: May 13th, 2020
Gene Product: August 25th, 2018
91 days agorboh2 respiratory burst oxidase2:
3.07
GRMZM2G138152
Zhang, YS et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00457     Reference: May 13th, 2020
Gene Product: July 15th, 2013
Gene Model: July 2nd, 2013
3 months agoaasr6 abscisic acid stress ripening6:
5.04
GRMZM2G057841
Gong, XP et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa229     Reference: May 12th, 2020
Gene Product: January 2nd, 2019
Variation: November 12th, 2014
Gene Model: November 1st, 2011
3 months agoinvan2 invertase alkaline neutral2:
5.05
GRMZM2G118737
Gong, XP et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa229     Reference: May 12th, 2020
Gene Product: June 12th, 2018
Variation: September 1st, 2003
Gene Model: July 10th, 2018
3 months agoacco3 1-aminocyclopropane-1-carboxylate oxidase3:
 
GRMZM2G166616
Gong, XP et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa229     Reference: May 12th, 2020
Gene Product: May 16th, 2016
Gene Model: May 16th, 2016
3 months agoacco4 1-aminocyclopropane-1-carboxylate oxidase4:
 
GRMZM2G332423
Gong, XP et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa229     Reference: May 12th, 2020
Gene Product: May 16th, 2016
Gene Model: May 16th, 2016
3 months agonpf6 nitrate transporter/peptide transporter family6:
 
GRMZM2G137421
Gong, XP et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa229     Reference: May 12th, 2020
Gene Product: September 1st, 2003
Gene Model: May 21st, 2019
3 months agoIDP51  :
5.05
   Gong, XP et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa229     Reference: May 12th, 2020
Variation: September 25th, 2007
3 months agomagi2594  :
1.11
GRMZM2G352415
Gong, XP et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa229     Reference: May 12th, 2020
Variation: April 24th, 2006
Gene Model: February 16th, 2020
3 months agolg2 liguleless2: like lg1, less extreme
3.06
   Adewale, SA et al. 2020. BMC Plant Biology 20:203     Reference: May 11th, 2020
Gene Product: August 22nd, 2014
Variation: August 20th, 2014
3 months agowc1 white cap1: dominant Wc1 kernels have pale yellow endosperm if Y1 (pearly white with y1); whiteness is emphasized in soft-starch crowns
9.07
   Adewale, SA et al. 2020. BMC Plant Biology 20:203     Reference: May 11th, 2020
Gene Product: September 20th, 2012
Variation: October 5th, 2012
3 months agoumc1274  :
5.03
GRMZM2G053500
    Variation: September 1st, 2003
Gene Model: May 11th, 2020
3 months agoumc1373  :
5.03
GRMZM2G132060
    Variation: September 1st, 2003
Gene Model: May 11th, 2020
3 months agoarid7 ARID-transcription factor 7: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G466270
Qian, YX et al. 2019. BMC Genomics 20:256     Reference: April 3rd, 2019
Gene Product: April 3rd, 2019
Gene Model: May 11th, 2020
3 months agoamt5 ammonium transporter5:
10.04
GRMZM2G164743
Adewale, SA et al. 2020. BMC Plant Biology 20:203     Reference: May 11th, 2020
Gene Product: July 8th, 2013
Gene Model: December 29th, 2017
3 months agoIDP101  :
5.03
GRMZM2G165351
    Variation: March 31st, 2005
Gene Model: May 11th, 2020
3 months agoIDP1604  :
5.03
GRMZM2G112805
    Variation: March 31st, 2005
Gene Model: May 11th, 2020
3 months agorpl44 ribosomal protein L44: vegetative meristem cDNA 7C02A07
7.03
GRMZM2G009412
Adewale, SA et al. 2020. BMC Plant Biology 20:203     Reference: May 11th, 2020
Gene Product: September 1st, 2003
Variation: January 24th, 2009
Gene Model: June 1st, 2017
3 months agocl3313_1  :
5.03
GRMZM2G089119
    Variation: September 25th, 2007
Gene Model: May 10th, 2020
3 months agopco113787  :
5.03
GRMZM5G854533
    Variation: September 25th, 2007
Gene Model: May 10th, 2020
3 months agoIDP1672  :
5.03
GRMZM2G099452
    Variation: March 31st, 2005
Gene Model: May 10th, 2020
3 months agoal1 albescent plant1: variably cross-banded to white leaves, pale yellow endosperm, some alleles viviparous; y3 is allelic
2.01
   Hunter, Charles et al. 2020. Maize Genetics Conference Abstracts 62:P138     Reference: May 9th, 2020
Variation: April 11th, 2011
3 months agoIDP1660  :
5.03
GRMZM2G048205
    Variation: March 31st, 2005
Gene Model: May 9th, 2020
3 months agomips1 myo-inositol phosphate synthase1: encodes myo-inositol phosphate synthase; may be involved in kernel phytic acid levels
1.02
GRMZM2G155242
Li, T et al. 2020. J Biol Chem pp.doi: 10.1074/jbc.RA120.013948     Reference: May 8th, 2020
Gene Product: July 13th, 2019
Variation: April 30th, 2011
Gene Model: April 23rd, 2013
Recommended by Ed Coe:
January 8th, 2008
3 months agoast91 anti-sigma factor antagonist domain of sulfate transporter91:
2.02
GRMZM2G395114
Chorianopoulou, SN et al. 2020. Int J Mol Sci 21:3249   AT1G23090 (TAIR)
LOC_Os04g55800 (MSU/TIGR)
Reference: May 8th, 2020
Gene Product: May 8th, 2020
Variation: February 2nd, 2018
Gene Model: February 2nd, 2018
3 months agosfp5 sulfate transporter5:
9.02
GRMZM2G444801
Chorianopoulou, SN et al. 2020. Int J Mol Sci 21:3249     Reference: May 8th, 2020
Gene Product: May 8th, 2020
Gene Model: March 14th, 2018
3 months agosfp1 sulfate permease1:
1.02
GRMZM2G159632
Chorianopoulou, SN et al. 2020. Int J Mol Sci 21:3249     Reference: May 8th, 2020
Gene Product: May 8th, 2020
Gene Model: February 3rd, 2015
3 months agoaprl1 adenosine 5'-phosphosulfate reductase-like1: Involved in Sulfur homeostasis
7.03
AC189750.4_FG004
Chorianopoulou, SN et al. 2020. Int J Mol Sci 21:3249     Reference: May 8th, 2020
Gene Product: October 10th, 2017
Variation: January 13th, 2016
Gene Model: December 18th, 2015
3 months agoaprl2 adenosine 5'-phosphosulfate reductase-like2:
2.07
GRMZM2G087254
Chorianopoulou, SN et al. 2020. Int J Mol Sci 21:3249     Reference: May 8th, 2020
Gene Product: October 10th, 2017
Variation: December 23rd, 2015
Gene Model: December 18th, 2015
3 months agosfp2 sulfate transporter2:
 
GRMZM2G080178
Chorianopoulou, SN et al. 2020. Int J Mol Sci 21:3249     Reference: May 8th, 2020
Gene Product: May 8th, 2020
Gene Model: November 13th, 2017
3 months agosfp4 sulfate transporter4:
 
GRMZM2G154211
Chorianopoulou, SN et al. 2020. Int J Mol Sci 21:3249     Reference: May 8th, 2020
Gene Product: May 8th, 2020
Gene Model: November 13th, 2017
3 months agosfp6 sulfate transporter6:
 
GRMZM2G158013
Chorianopoulou, SN et al. 2020. Int J Mol Sci 21:3249     Reference: May 8th, 2020
Gene Product: May 8th, 2020
Gene Model: November 13th, 2017
3 months agosfp7 sulfate transporter7:
 
GRMZM2G068212
Chorianopoulou, SN et al. 2020. Int J Mol Sci 21:3249     Reference: May 8th, 2020
Gene Product: May 8th, 2020
Gene Model: November 13th, 2017
3 months agoaga1 alkaline galactosidase1:
 
GRMZM2G340656
Li, T et al. 2020. J Biol Chem pp.doi: 10.1074/jbc.RA120.013948     Reference: May 8th, 2020
Gene Product: March 1st, 2018
Gene Model: March 1st, 2018
3 months agosfp8 sulfate transporter8:
 
GRMZM2G342907
Chorianopoulou, SN et al. 2020. Int J Mol Sci 21:3249     Reference: May 8th, 2020
Gene Product: May 8th, 2020
Gene Model: May 8th, 2020
3 months agomips2 myo-inositol phosphate synthase2:
 
GRMZM2G004528
Li, T et al. 2020. J Biol Chem pp.doi: 10.1074/jbc.RA120.013948     Reference: May 8th, 2020
Gene Product: July 13th, 2019
Gene Model: May 8th, 2020
3 months agoIDP486  :
5.03
GRMZM2G026216
    Variation: March 31st, 2005
Gene Model: May 8th, 2020
3 months agoIDP628  :
5.03
GRMZM2G156748
    Variation: March 31st, 2005
Gene Model: May 8th, 2020
3 months agosir1 sulfite reductase1:
 
GRMZM2G090338
Chorianopoulou, SN et al. 2020. Int J Mol Sci 21:3249     Reference: May 8th, 2020
Gene Product: September 1st, 2003
Variation: January 26th, 2011
Gene Model: July 28th, 2016
3 months agosfp3 sulfate transporter3:
1.02
GRMZM2G042171
Chorianopoulou, SN et al. 2020. Int J Mol Sci 21:3249     Reference: May 8th, 2020
Gene Product: May 8th, 2020
Gene Model: November 13th, 2017
3 months agonactf87 NAC-transcription factor 87: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Liu, XG et al. 2020. BMC Plant Biology 20:196     Reference: May 7th, 2020
Gene Product: July 8th, 2019
3 months agocesa2 cellulose synthase2: cDNA
6.05
   Liu, XG et al. 2020. BMC Plant Biology 20:196     Reference: May 7th, 2020
Gene Product: October 7th, 2016
Variation: October 9th, 2012
3 months agopox3 guaiacol peroxidase3:
6.05
GRMZM2G135108
Liu, XG et al. 2020. BMC Plant Biology 20:196     Reference: May 7th, 2020
Gene Product: September 1st, 2003
Variation: January 7th, 2016
Gene Model: February 9th, 2015
3 months agopco090715  :
5.03
GRMZM2G067306
    Variation: September 25th, 2007
Gene Model: May 7th, 2020
3 months agoact1 actin1: actin, one of six potential genes; genomic DNA clone; 3 introns); SSR phi115
8.03 - 8.04
   Stagnati, L et al. 2020. G3 10:1685-1696     Reference: May 6th, 2020
Gene Product: September 1st, 2003
Variation: September 4th, 2013
3 months agopdc3 pyruvate decarboxylase3: cDNA sequence, gene-specific probe
1.03
   Stagnati, L et al. 2020. G3 10:1685-1696     Reference: May 6th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
3 months agoereb53 AP2-EREBP-transcription factor 53: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Stagnati, L et al. 2020. G3 10:1685-1696   LOC_Os1g67410 (MSU/TIGR) Reference: May 6th, 2020
Gene Product: July 5th, 2019
3 months agoca2p5 CCAAT-HAP2-transcription factor 25: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Stagnati, L et al. 2020. G3 10:1685-1696     Reference: May 6th, 2020
Gene Product: August 9th, 2016
3 months agotubtf10 TUB-transcription factor 10: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Stagnati, L et al. 2020. G3 10:1685-1696     Reference: May 6th, 2020
Gene Product: September 29th, 2015
3 months agogrp3 glycine-rich protein3: single or low copy number cDNA;
5.03
   Stagnati, L et al. 2020. G3 10:1685-1696     Reference: May 6th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
3 months agocpn1 chaperonin 1: cDNA sequence homologous to hsp60 family; 2 copies
5.03
GRMZM2G458208
Stagnati, L et al. 2020. G3 10:1685-1696     Reference: May 6th, 2020
Gene Product: September 1st, 2003
Variation: May 20th, 2015
Gene Model: May 20th, 2015
3 months agoyab6 C2C2-YABBY-transcription factor 6: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G074124
Stitzer, MC; Ross-Ibarra, J. 2018. New Phytol pp.doi: 10.1111/nph.15350     Reference: July 24th, 2018
Gene Product: October 16th, 2015
Variation: May 6th, 2020
Gene Model: July 3rd, 2012
3 months agoburp2 BURP domain-containing protein-RD22-like2: Water deficit caused a 1.6-fold increase in the expression; expression up-regulated by ABA.
 
GRMZM5G800586
Stagnati, L et al. 2020. G3 10:1685-1696     Reference: May 6th, 2020
Gene Product: August 18th, 2017
Variation: August 18th, 2017
Gene Model: August 18th, 2017
3 months agoIDP337  :
5.02
GRMZM2G079083
    Variation: March 31st, 2005
Gene Model: May 6th, 2020
3 months agohb122 Homeobox-transcription factor 122: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Gao, H et al. 2020. Frontiers Plant Sci 11:535     Reference: May 5th, 2020
Gene Product: August 25th, 2017
3 months agogsr1 glutathione reductase1: single copy leaf cDNA csu111, similar to pea glutathione reductase
1.01
   Gao, H et al. 2020. Frontiers Plant Sci 11:535     Reference: May 5th, 2020
Gene Product: September 1st, 2003
Variation: January 30th, 2015
3 months agoIDP1425  :
1.02
GRMZM2G136081
Gao, H et al. 2020. Frontiers Plant Sci 11:535     Reference: May 5th, 2020
Variation: March 31st, 2005
Gene Model: February 11th, 2019
3 months agomagi2762  :
1.02
GRMZM2G172410
Gao, H et al. 2020. Frontiers Plant Sci 11:535     Reference: May 5th, 2020
Variation: March 31st, 2005
Gene Model: February 11th, 2019
3 months agoumc1478  :
5.01
GRMZM2G007260
    Variation: September 1st, 2003
Gene Model: May 3rd, 2020
3 months agoIDP532  :
5.01
GRMZM2G009928
    Variation: March 31st, 2005
Gene Model: May 3rd, 2020
3 months agobgh1 big grain1 homolog1:
 
GRMZM2G178852
Simmons, CR et al. 2020. Plant Biotechnol J pp.doi: 10.1111/pbi.13392     Reference: May 2nd, 2020
Variation: May 2nd, 2020
Gene Model: May 2nd, 2020
3 months agoIDP122  :
5.00
GRMZM2G144020
    Variation: March 31st, 2005
Gene Model: May 2nd, 2020
3 months agoIDP2557  :
5.00
GRMZM2G110881
    Variation: March 31st, 2005
Gene Model: May 2nd, 2020
3 months agopza00818  :
5.00
GRMZM2G146158
    Variation: September 25th, 2007
Gene Model: May 1st, 2020
3 months agocchh35 Cys2His2 Zinc Finger35: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
10.02
GRMZM2G068710
Matonyei, TK et al. 2020. Sci. Rep. 10:7320     Reference: May 1st, 2020
Gene Product: December 6th, 2019
Gene Model: January 23rd, 2018
3 months agoumc1416  :
5.00
GRMZM2G033117
    Variation: September 1st, 2003
Gene Model: May 1st, 2020
3 months agomate1 multidrug and toxic compound extrusion1: confers aluminum tolerance in lines that carry 3 adjacent identical copies of the mate1 gene (Maron et al 2013)
 
GRMZM5G870170
Matonyei, TK et al. 2020. Sci. Rep. 10:7320     Reference: May 1st, 2020
Gene Product: August 17th, 2015
Variation: March 19th, 2013
Gene Model: March 19th, 2013
3 months agomate6 multidrug and toxic compound extrusion6: Sorghum ortholog: Sb04g001840
 
GRMZM2G065154
Matonyei, TK et al. 2020. Sci. Rep. 10:7320   LOC_Os02g02980 (MSU/TIGR) Reference: May 1st, 2020
Gene Product: August 17th, 2015
Gene Model: August 17th, 2015
3 months agokwl1 kiwellin1: specifically blocks the catalytic activity of Ustilago maydis secreted fungal chorismate mutase Cmu1, by hindering substrate access to the active site
 
GRMZM2G073114
Altegoer, F et al. 2020. J Biol Chem pp.doi: 10.1074/jbc.RA119.012207     Reference: May 1st, 2020
Gene Product: January 22nd, 2019
Gene Model: January 21st, 2019
3 months agosmc3 structural maintenance of chromosomes3: participates in meiotic centromere pairing
 
GRMZM2G456570
Zhang, J et al. 2020. Plant Cell 32:1323-1336     Reference: May 1st, 2020
Gene Product: December 10th, 2019
Variation: January 30th, 2020
Gene Model: January 30th, 2020
3 months agokwl2 kiwellin2: specifically blocks the catalytic activity of Ustilago maydis secreted fungal chorismate mutase Cmu1, by hindering substrate access to the active site
 
GRMZM2G305329
Altegoer, F et al. 2020. J Biol Chem pp.doi: 10.1074/jbc.RA119.012207     Reference: May 1st, 2020
Gene Product: January 22nd, 2019
Gene Model: May 1st, 2020
3 months agokwl12 kiwellin12:
 
GRMZM2G429533
Han, XW, et al. 2019. Nature. 0:doi: 10.1038/s41586-018-0857-9     Reference: January 28th, 2019
Gene Product: January 22nd, 2019
Gene Model: May 1st, 2020
3 months agokwl6 kiwellin6:
 
GRMZM2G331599
Han, XW, et al. 2019. Nature. 0:doi: 10.1038/s41586-018-0857-9     Reference: January 28th, 2019
Gene Product: January 22nd, 2019
Gene Model: May 1st, 2020
3 months agokwl4 kiwellin4:
 
GRMZM2G432697
Han, XW, et al. 2019. Nature. 0:doi: 10.1038/s41586-018-0857-9     Reference: January 28th, 2019
Gene Product: January 22nd, 2019
Gene Model: May 1st, 2020
3 months agonrat2 nramp aluminum transporter2: 81.8% sequence identity with OsNrat1, an Al3+ transporter involved in rice Al tolerance (Matonyei et al., 2020)
 
GRMZM2G168747
Matonyei, TK et al. 2020. Sci. Rep. 10:7320     Reference: May 1st, 2020
Gene Product: August 17th, 2015
Gene Model: May 1st, 2020
3 months agoapx2 ascorbate peroxidase2: leaf cDNA, similar to plant cytosolic ascorbate peroxidase; sequence distinct from apx1
2.08
GRMZM2G140667
Silva Neta, IC et al. 2020. BMC Plant Biology 20:188     Reference: April 30th, 2020
Gene Product: September 1st, 2003
Variation: February 16th, 2015
Gene Model: February 16th, 2015
Recommended by Ed Coe:
January 8th, 2008
3 months agouaz233a(act)  :
8.05
GRMZM2G067985
Shen, B; Carneiro, N; Torres-Jerez, I; Stevenson, B; McCreery, T; Helentjaris, T; Baysdorfer, C; Alm. 1994. Plant Mol Biol 26:1085-1101     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Gene Model: April 30th, 2020
3 months agosod4 superoxide dismutase4: electrophoretic mobility; cytosolic; Cu-Zn dimeric; intralocus hybrid bands occur; two similar sequences X17564 (sod4), X17565(sod4A)
1.04
   Silva Neta, IC et al. 2020. BMC Plant Biology 20:188     Reference: April 30th, 2020
Gene Product: February 12th, 2007
Variation: April 20th, 2005
3 months agompk2 MAP kinase2: functions in brassinosteroid signaling in antioxidant defense (Zhang et al 2010) cDNA sequence; single copy (Berberich et al 1999)
9.02
GRMZM2G020216
Silva Neta, IC et al. 2020. BMC Plant Biology 20:188     Reference: April 30th, 2020
Gene Product: July 12th, 2013
Variation: January 18th, 2013
Gene Model: July 9th, 2013
3 months agohak1 potassium high-affinity transporter1:
2.04
GRMZM2G093826
Zhang, M, et al. 2019. Nature Plants. 5:1297-1308     Reference: April 30th, 2020
Gene Product: March 12th, 2020
Gene Model: February 23rd, 2018
3 months agonc1 Na+ content1: loss-of-function allele confers increased accumulation of Na+ in leaves, and salt hypersensitivity.
 
GRMZM2G047616
Zhang, M, et al. 2019. Nature Plants. 5:1297-1308     Reference: April 30th, 2020
Gene Product: November 15th, 2017
Variation: November 15th, 2017
Gene Model: November 15th, 2017
3 months agonc2 Na+ content2:
 
GRMZM2G135674
Zhang, M, et al. 2019. Nature Plants. 5:1297-1308     Reference: April 30th, 2020
Gene Product: November 15th, 2017
Gene Model: November 15th, 2017
3 months agohak5 potassium high-affinity transporter5: mutants exhibit reduced K uptake and inhibited seedling growth
 
GRMZM2G084779
Zhang, M, et al. 2019. Nature Plants. 5:1297-1308     Reference: April 30th, 2020
Gene Product: March 12th, 2020
Variation: December 15th, 2018
Gene Model: December 15th, 2018
3 months agohak4 high-affinity potassium transporter4: encodes a Na+-selective transporter
 
GRMZM2G425999
Zhang, M, et al. 2019. Nature Plants. 5:1297-1308     Reference: April 30th, 2020
Gene Product: March 12th, 2020
Gene Model: December 10th, 2019
3 months agogex2 gamete expressed2: mutants have reduced transmission (<35% for two independent insertions), and also triggered seed defects when crossed as a male
 
GRMZM2G036832
Warman, C, et al. 2020. PLoS Genetics. 0:doi: 10.1371/journal.pgen.1008462   AT5G49150 (TAIR) Reference: April 30th, 2020
Gene Product: February 25th, 2020
Variation: February 25th, 2020
Gene Model: February 25th, 2020
3 months agosacd1 stearoyl-acyl-carrier-protein desaturase1: encodes Stearoyl-acyl carrier protein desaturase
3.05
GRMZM5G852502
Silva Neta, IC et al. 2020. BMC Plant Biology 20:188     Reference: April 30th, 2020
Gene Product: October 10th, 2016
Variation: June 15th, 2016
Gene Model: June 15th, 2016
3 months agoact5 actin5: Interacts with GRMZM2G035341 and together form a novel funtional candidate involved in oil pathways via epistatic effect
5.01
GRMZM2G152328
Li, H et al. 2020. Plant J pp.doi: 10.1111/tpj.14786     Reference: April 29th, 2020
Gene Product: September 1st, 2003
Variation: April 29th, 2020
Gene Model: April 29th, 2020
3 months agoact3 actin3:
 
GRMZM2G104017
Moniz de Sa, M and Drouin, G. 1996. Mol Biol Evol 13:1198-1212     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Gene Model: April 29th, 2020
3 months agoact4 actin4:
 
GRMZM2G006765
Moniz de Sa, M and Drouin, G. 1996. Mol Biol Evol 13:1198-1212     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: April 29th, 2020
3 months agoact6 actin6:
 
GRMZM2G053284
Moniz de Sa, M and Drouin, G. 1996. Mol Biol Evol 13:1198-1212     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: April 29th, 2020
Gene Model: April 29th, 2020
3 months agoapx1 ascorbate peroxidase homolog:
9.04
GRMZM2G054300
Singh, I et al. 2020. Physiology and Molecular Biology of Plants pp.doi: 10.1007/s12298-020-00801-6     Reference: April 29th, 2020
Variation: August 10th, 2012
Gene Model: June 19th, 2013
3 months agosod2 superoxide dismutase2: electrophoretic mobility; cytosolic; Cu-Zn dimeric
7.05
   Singh, I et al. 2020. Physiology and Molecular Biology of Plants pp.doi: 10.1007/s12298-020-00801-6     Reference: April 29th, 2020
Gene Product: February 12th, 2007
Variation: August 2nd, 2013
3 months agocyb561 cytochrome b561:
4.06
GRMZM2G060357
Nakanishi, N et al. 2009. Biochemistry 48:10665-10678     Reference: April 29th, 2020
Gene Product: April 29th, 2020
Gene Model: June 11th, 2018
3 months agowri1 wrinkled1 transcription factor1:
 
GRMZM2G124524
Yang, JW et al. 2020. Sci. Rep. 10:7086   AT3G54320 (TAIR) Reference: April 29th, 2020
Gene Product: July 5th, 2019
Variation: April 11th, 2011
Gene Model: April 8th, 2011
3 months agocdpk24 calcium dependent protein kinase24:
 
GRMZM2G088361
Yang, JW et al. 2020. Sci. Rep. 10:7086     Reference: April 29th, 2020
Gene Product: December 3rd, 2013
Gene Model: January 10th, 2018
3 months agoact9 actin9:
 
GRMZM2G047055
    Gene Product: September 1st, 2003
Gene Model: April 29th, 2020
3 months agoact8 actin8:
4.09
GRMZM2G126190
Moniz de Sa, M and Drouin, G. 1996. Mol Biol Evol 13:1198-1212     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: April 29th, 2020
Gene Model: April 25th, 2020
3 months agofl1 floury endosperm1: (was o4) endosperm opaque, soft; dosage effect with fl1-ref allele, but o4 allele is recessive
2.04
GRMZM2G094532
Sandrine, AMN et al. 2020. Agronomy 10:624     Reference: April 28th, 2020
Gene Product: July 8th, 2013
Variation: September 16th, 2010
Gene Model: July 8th, 2013
3 months agoo7 opaque endosperm7: like o1; high lysine content
10.07
GRMZM2G074759
Sandrine, AMN et al. 2020. Agronomy 10:624     Reference: April 28th, 2020
Gene Product: December 20th, 2011
Variation: February 20th, 2012
Gene Model: December 16th, 2011
3 months agosh2 shrunken2: inflated, transparent, sweet kernels collapse on drying, becoming angular and brittle; endosperm ADPG pyrophosphorylase subunit (compare bt2); application: "supersweet" sweet corn - kernels sugar-sweet for long period
3.09
   Sandrine, AMN et al. 2020. Agronomy 10:624     Reference: April 28th, 2020
Gene Product: November 4th, 2014
Variation: January 9th, 2019
3 months agocnr1 Cell Number Regulator1:
 
GRMZM2G015941
Guo, M et al. 2010. Plant Cell 121:1057-1073     Reference: June 11th, 2013
Gene Product: April 28th, 2020
Gene Model: April 23rd, 2020
3 months agocnr2 Cell Number Regulator2:
 
GRMZM2G151230
Guo, M et al. 2010. Plant Cell 121:1057-1073     Reference: June 11th, 2013
Gene Product: April 28th, 2020
Gene Model: April 18th, 2020
3 months agonod1 narrow odd dwarf1: mutants are small plants with narrow leaves
 
GRMZM2G027821
Klein, H et al. 2018. G3 pp.doi: 10.1534/g3.118.200499   AT4G35920 (TAIR)
LOC_Os03g06120 (MSU/TIGR)
Reference: September 8th, 2018
Gene Product: April 28th, 2020
Variation: September 8th, 2018
Gene Model: March 4th, 2017
3 months agocnr3 Cell Number Regulator3:
 
GRMZM2G053387
Guo, M et al. 2010. Plant Cell 121:1057-1073     Reference: June 11th, 2013
Gene Product: April 28th, 2020
Gene Model: April 27th, 2020
3 months agocnr4 Cell Number Regulator4:
 
GRMZM2G141526
Guo, M et al. 2010. Plant Cell 121:1057-1073     Reference: June 11th, 2013
Gene Product: April 28th, 2020
Gene Model: April 28th, 2020
3 months agocnr5 Cell Number Regulator5:
 
GRMZM5G892035
Guo, M et al. 2010. Plant Cell 121:1057-1073     Reference: June 11th, 2013
Gene Product: April 28th, 2020
Gene Model: April 28th, 2020
3 months agocnr8 Cell Number Regulator8:
 
GRMZM2G334628
Guo, M et al. 2010. Plant Cell 121:1057-1073     Reference: June 11th, 2013
Gene Product: April 28th, 2020
Gene Model: April 28th, 2020
3 months agocnr9 Cell Number Regulator9:
 
GRMZM2G023081
Guo, M et al. 2010. Plant Cell 121:1057-1073     Reference: June 11th, 2013
Gene Product: April 28th, 2020
Gene Model: April 28th, 2020
3 months agocnr10 Cell Number Regulator10:
 
GRMZM2G325477
Guo, M et al. 2010. Plant Cell 121:1057-1073     Reference: June 11th, 2013
Gene Product: April 28th, 2020
Gene Model: April 28th, 2020
3 months agocnr11 Cell Number Regulator11:
 
GRMZM2G367431
Guo, M et al. 2010. Plant Cell 121:1057-1073     Reference: June 11th, 2013
Gene Product: April 28th, 2020
Gene Model: April 28th, 2020
3 months agocnr6 Cell Number Regulator6:
9.07
GRMZM2G168257
Guo, M et al. 2010. Plant Cell 121:1057-1073     Reference: June 11th, 2013
Gene Product: April 28th, 2020
Gene Model: April 28th, 2020
3 months agocnr7 Cell Number Regulator7:
1.11
GRMZM2G119755
Guo, M et al. 2010. Plant Cell 121:1057-1073     Reference: June 11th, 2013
Gene Product: April 28th, 2020
Gene Model: February 16th, 2020
3 months agoao3 aldehyde oxidase3: associated with ABA levels in silks of water-stressed plants (Setter et al 2011)
1.11
GRMZM2G019799
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: February 5th, 2013
Gene Model: February 5th, 2013
3 months agopsy2 phytoene synthase2: single copy cDNA, csu572, similar to tomato phytoene synthase; carotenoid biosynthesis
8.07
GRMZM2G149317
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: December 14th, 2011
Variation: May 12th, 2013
Gene Model: June 8th, 2012
3 months agolyce1 lycopene epsilon cyclase1: determines qualitative composition of endosperm carotenoids
8.05
GRMZM2G012966
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: December 10th, 2011
Variation: October 3rd, 2011
Gene Model: October 3rd, 2011
3 months agolw2 lemon white2: like lw1
5.05
GRMZM2G137409
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: February 8th, 2019
Variation: February 11th, 2019
Gene Model: February 8th, 2019
3 months agops1 pink scutellum1: (aka vp7, lyc1, lycB) some alleles viviparous; endosperm and scutellum pink, seedling white with pink flush
5.04 - 5.04
   Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: December 10th, 2011
Variation: March 30th, 2011
3 months agovp9 viviparous9: (was y7, z1, zds1) like vp2; vp9-4889 dormant, pale aleurone, pale green seedling
7.02
GRMZM2G454952
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: December 13th, 2011
Variation: March 25th, 2017
Gene Model: March 24th, 2017
3 months agoy1 yellow endosperm1: reduced carotenoid pigments in endosperm; some alleles affect chlorophyll in seedlings (e.g. y1-8549, y1-pb)
6.01
GRMZM2G300348
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: December 14th, 2011
Variation: August 26th, 2014
Gene Model: September 22nd, 2011
3 months agocrti3 carotene isomerase3: enclodes carotene isomerase
5.00
GRMZM2G144273
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: December 10th, 2011
Gene Model: June 14th, 2018
3 months agoippi1 isopentenyl pyrophosphate isomerase1: similar to Arabidopsis Isopentenyl-diphosphate Delta-isomerase IIpart of multigene family encoding isopentenyl pyrophosphate isomerase
7.03
GRMZM2G108285
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: December 10th, 2011
Variation: September 1st, 2003
Gene Model: September 11th, 2018
3 months agocyp15 cytochrome P450 15: encodes CYP97B
4.09
GRMZM2G010221
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: April 29th, 2013
Gene Model: May 31st, 2018
3 months agocmk1 cytidine methyl kinase1: encodes 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase [a.k.a. 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase]
3.06
GRMZM5G859195
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: October 9th, 2014
Gene Model: October 4th, 2014
3 months agodxr2 deoxy xylulose reductoisomerase2:
8.01
GRMZM2G036290
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: December 10th, 2011
Gene Model: September 16th, 2018
3 months agohyd3 hydroxylase3: beta-carotene hydroxylase
 
GRMZM2G152135
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: December 13th, 2011
Variation: September 3rd, 2011
Gene Model: April 9th, 2013
3 months agohyd4 hydroxylase4: beta-carotene hydroxylase
 
GRMZM2G164318
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: December 13th, 2011
Variation: September 3rd, 2011
Gene Model: April 9th, 2013
3 months agohyd5 hydroxylase5: beta-carotene hydroxylase
 
GRMZM2G382534
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: December 13th, 2011
Variation: September 3rd, 2011
Gene Model: April 9th, 2013
3 months agohyd6 hydroxylase6: beta-carotene hydroxylase
 
GRMZM5G826824
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: December 13th, 2011
Variation: September 3rd, 2011
Gene Model: July 27th, 2017
3 months agodxs3 deoxy xylulose synthase3:
 
GRMZM2G173641
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: August 17th, 2004
Variation: February 15th, 2012
Gene Model: December 9th, 2011
3 months agohyd7 hydroxylase7: beta-carotene hydroxylase
 
GRMZM2G163683
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: December 13th, 2011
Variation: February 17th, 2012
Gene Model: April 9th, 2013
3 months agoccd8 carotenoid cleavage dioxygenase8: Mutants have mild branching, short stature, small ear size, and narrow-stalk
 
GRMZM2G446858
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: September 20th, 2012
Variation: September 21st, 2012
Gene Model: September 20th, 2012
3 months agocrti1 carotene isomerase1: enclodes carotene isomerase1
 
GRMZM2G108457
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: December 10th, 2011
Gene Model: April 8th, 2013
3 months agocrti2 carotene isomerase2: encodes carotene isomerase2
 
GRMZM2G106531
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: December 10th, 2011
Gene Model: April 8th, 2013
3 months agoggps1 geranylgeranyl pyrophosphate synthase1: part of multigene family encoding geranylgeranyl diphosphate synthase
 
AC194970.5_FG001
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: April 8th, 2013
Gene Model: April 8th, 2013
3 months agoggps2 geranylgeranyl pyrophosphate synthase2: part of multigene family encoding geranylgeranyl diphosphate synthase
 
GRMZM2G102550
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: April 8th, 2013
Gene Model: April 8th, 2013
3 months agoggps3 geranylgeranyl pyrophosphate synthase3: part of multigene family encoding geranylgeranyl diphosphate synthase
 
GRMZM2G058404
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: April 8th, 2013
Gene Model: April 8th, 2013
3 months agoippi2 isopentenyl pyrophosphate isomerase2: part of multigene family encoding isopentenyl pyrophosphate isomerasesimilar to Isopentenyl-diphosphate Delta-isomerase II of A. thaliana
 
GRMZM2G145029
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: December 10th, 2011
Gene Model: April 8th, 2013
3 months agoippi3 isopentenyl pyrophosphate isomerase3: part of multigene family encoding isopentenyl pyrophosphate isomerase
 
GRMZM2G133082
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: December 10th, 2011
Gene Model: April 8th, 2013
3 months agoggps4 geranylgeranyl pyrophosphate synthase4: part of multigene family encoding geranylgeranyl diphosphate synthase
 
GRMZM2G005909
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: April 8th, 2013
Gene Model: April 8th, 2013
3 months agocyp13 cytochrome P450 13: encodes CYP97A
 
GRMZM5G837869
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: April 8th, 2013
Variation: July 8th, 2017
Gene Model: April 8th, 2013
3 months agocyp14 cytochrome P450 14: encodes CYP97C
 
GRMZM2G143202
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: June 3rd, 2015
Variation: June 3rd, 2015
Gene Model: April 8th, 2013
3 months agovde1 violaxanthin de-epoxidase1: Encodes violaxanthin de-epoxidase. Based on sequence similarity to Arabidopsis gene.
 
GRMZM2G027219
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: December 13th, 2011
Gene Model: April 9th, 2013
3 months agonced2 nine-cis-epoxycarotenoid dioxygenase2:
 
GRMZM2G407181
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: September 20th, 2012
Gene Model: October 4th, 2014
3 months agonced4 nine-cis-epoxycarotenoid dioxygenase4:
 
GRMZM2G408158
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: September 20th, 2012
Gene Model: October 4th, 2014
3 months agonced7 nine-cis-epoxycarotenoid dioxygenase7:
 
GRMZM2G330848
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: September 20th, 2012
Gene Model: October 4th, 2014
3 months agonced6 nine-cis-epoxycarotenoid dioxygenase6:
 
GRMZM2G110192
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: September 20th, 2012
Gene Model: October 4th, 2014
3 months agonced8 nine-cis-epoxycarotenoid dioxygenase8:
 
GRMZM2G150363
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: September 20th, 2012
Gene Model: October 4th, 2014
3 months agonced9 nine-cis-epoxycarotenoid dioxygenase9:
 
GRMZM5G838285
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: September 20th, 2012
Gene Model: October 4th, 2014
3 months agoao4 aldehyde oxidase4:
 
GRMZM2G141473
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: October 4th, 2014
Gene Model: October 4th, 2014
3 months agoao5 aldehyde oxidase5:
 
GRMZM2G406830
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: October 4th, 2014
Gene Model: October 4th, 2014
3 months agohyd8 hydroxylase8:
 
GRMZM5G826824
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: December 13th, 2011
Gene Model: October 4th, 2014
3 months agoccd7 carotenoid cleavage dioxygenase7:
 
GRMZM2G158657
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008   AT2G44990 (TAIR) Reference: April 27th, 2020
Gene Product: September 20th, 2012
Gene Model: October 4th, 2014
3 months agomecs1 methyl erythritol cyclodiphosphate synthase1:
 
GRMZM5G835542
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: October 4th, 2014
Gene Model: October 4th, 2014
3 months agomecs2 methyl erythritol cyclodiphosphate synthase2:
 
AC209374.4_FG002
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: October 4th, 2014
Gene Model: October 4th, 2014
3 months agodmes2 diphosphocytidyl methyl erythritol synthase2: cytosolic per NCBI
 
GRMZM2G172032
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: March 7th, 2014
Gene Model: October 4th, 2014
3 months agochph1 chlorophyllase1: encodes a chlorophyllase
 
GRMZM2G170734
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: August 5th, 2016
Gene Model: October 4th, 2014
3 months agoggh1 geranylgeranyl hydrogenase1:
 
GRMZM2G105644
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: October 4th, 2014
Gene Model: October 4th, 2014
3 months agoggh2 geranylgeranyl hydrogenase2:
 
GRMZM2G419111
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: October 4th, 2014
Gene Model: October 4th, 2014
3 months agoao2 aldehyde oxidase2:
5.01
GRMZM5G899851
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: October 4th, 2014
Gene Model: July 7th, 2017
3 months agodmes1 diphosphocytidyl methyl erythritol synthase1: encodes 4-Diphosphocytidyl-2C-methyl-D-erythritol synthase
6.01
GRMZM5G856881
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: March 7th, 2014
Gene Model: October 4th, 2014
3 months agodxs1 deoxy xylulose synthase 1: leaf specific; function inferred from Medicago trunculata gene sequence and expression pattern (Walter 2002)
6.05
GRMZM2G137151
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: August 17th, 2004
Variation: June 20th, 2012
Gene Model: December 9th, 2011
3 months agodxs2 deoxy xylulose synthase 2: root specific; function inferred from sequence and expression pattern comparison with Medicago trunculata genes
9.03
GRMZM2G493395
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: August 17th, 2004
Variation: September 17th, 2019
Gene Model: December 9th, 2011
3 months agodxr1 deoxy xylulose reductoisomerase1: enzyme catalyzes the first committed step of the plastidial pathway to apocarotenoids during mycorrhizal establishment
3.04
GRMZM2G056975
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: December 10th, 2011
Variation: May 11th, 2005
Gene Model: December 9th, 2011
3 months agoao1 aldehyde oxidase1: functionally cloned (Sekimoto et al 1997)
1.11
GRMZM2G141535
Baseggio, M et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20008     Reference: April 27th, 2020
Gene Product: May 2nd, 2012
Variation: May 30th, 2012
Gene Model: October 4th, 2014
3 months agoIDP1459  :
4.10
GRMZM2G155370
    Variation: March 31st, 2005
Gene Model: April 26th, 2020
3 months agoumc1322  :
 
GRMZM2G306032
    Variation: September 1st, 2003
Gene Model: April 25th, 2020
3 months agoumc1559  :
4.08 - 4.09
GRMZM2G702806
    Variation: September 1st, 2003
Gene Model: April 25th, 2020
3 months agopco072913  :
4.08
GRMZM2G177720
    Variation: September 25th, 2007
Gene Model: April 25th, 2020
3 months agoIDP324  :
4.08
GRMZM2G017578
    Variation: March 31st, 2005
Gene Model: April 25th, 2020
3 months agoIDP498  :
4.09
GRMZM2G474119
    Variation: March 31st, 2005
Gene Model: April 25th, 2020
3 months agoumc1371  :
4.08
GRMZM2G163671
    Variation: September 1st, 2003
Gene Model: April 24th, 2020
3 months agoumc1612  :
4.08
GRMZM2G012391
    Variation: September 1st, 2003
Gene Model: April 24th, 2020
3 months agoub2 unbranched2: double mutant shows decrease in tassel branch number
 
   Du, YF et al. 2020. PLoS Genetics 16:e1008764     Reference: April 24th, 2020
Gene Product: July 5th, 2019
Variation: December 17th, 2014
3 months agoIDP276  :
4.08
GRMZM2G076087
    Variation: March 31st, 2005
Gene Model: April 24th, 2020
3 months agoIDP867  :
4.08
GRMZM2G013949
    Variation: March 31st, 2005
Gene Model: April 24th, 2020
3 months agoumc1194  :
4.07
GRMZM2G475683
    Variation: September 1st, 2003
Gene Model: April 23rd, 2020
3 months agopco123260  :
4.07
GRMZM2G079353
    Variation: September 25th, 2007
Gene Model: April 23rd, 2020
3 months agonrh2 nucleoside N-ribohydrolase2:
 
GRMZM2G134149
Kopecna, M et al. 2013. Plant Physiol 163:1568-1583     Reference: April 22nd, 2020
Gene Product: April 22nd, 2020
Gene Model: April 22nd, 2020
3 months agonrh4 nucleoside N-ribohydrolase4:
 
GRMZM2G085960
Kopecna, M et al. 2013. Plant Physiol 163:1568-1583     Reference: April 22nd, 2020
Gene Product: April 22nd, 2020
Gene Model: April 22nd, 2020
3 months agonrh5 nucleoside N-ribohydrolase5:
 
GRMZM2G015344
Kopecna, M et al. 2013. Plant Physiol 163:1568-1583     Reference: April 22nd, 2020
Gene Product: April 22nd, 2020
Gene Model: April 22nd, 2020
3 months agocpn10  :
 
GRMZM2G091189
Shen, B; Carneiro, N; Torres-Jerez, I; Stevenson, B; McCreery, T; Helentjaris, T; Baysdorfer, C; Alm. 1994. Plant Mol Biol 26:1085-1101     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Gene Model: April 22nd, 2020
3 months agonrh1 nucleoside N-ribohydrolase1:
8.01
GRMZM2G029845
Kopecna, M et al. 2013. Plant Physiol 163:1568-1583     Reference: April 22nd, 2020
Gene Product: April 22nd, 2020
Gene Model: April 22nd, 2020
3 months agoIDP1421  :
4.07
GRMZM2G010491
    Variation: March 31st, 2005
Gene Model: April 22nd, 2020
3 months agonrh3 nucleoside N-ribohydrolase3:
2.06
GRMZM2G104999
Kopecna, M et al. 2013. Plant Physiol 163:1568-1583     Reference: April 22nd, 2020
Gene Product: April 22nd, 2020
Gene Model: March 19th, 2020
3 months agoumc1329  :
4.06
GRMZM2G122767
    Variation: September 1st, 2003
Gene Model: April 21st, 2020
3 months agospo1 topoisomerase-like enzyme1: Homolog of SPO11, which generates double-stranded breaks along meiotic chromosomes
 
GRMZM2G129913
Ku, JC et al. 2020. PLoS Genetics 16:e1007881     Reference: April 21st, 2020
Gene Product: June 19th, 2014
Variation: April 21st, 2020
Gene Model: June 19th, 2014
3 months agopco068393  :
4.07
GRMZM2G054012
    Variation: September 25th, 2007
Gene Model: April 21st, 2020
3 months agoptf1 Pi starvation-induced transcription factor1: single copy, may be involved in regulating carbohydrate metabolism
9.01 - 9.02
GRMZM2G024530
Mohapatra, U et al. 2020. Euphytica 216:76   LOC_Os02g35660 (MSU/TIGR)
Os02g0564700 (Gramene)
Reference: April 20th, 2020
Gene Product: September 14th, 2016
Variation: April 23rd, 2011
Gene Model: April 19th, 2011
Recommended by Maria Katherine Mejia-Guerra:
April 18th, 2011
3 months agohscf1 heat shock complementing factor1: cDNA with 2 APETALA2-like binding domains
9.03
GRMZM2G139082
Du, XM et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20018     Reference: April 20th, 2020
Variation: December 22nd, 2012
Gene Model: July 28th, 2016
3 months agoexpa2 alpha expansin2: belongs to a multigene family and probably exists as a single copy.
5.05
GRMZM2G105844
Du, XM et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20018     Reference: April 20th, 2020
Gene Product: March 12th, 2008
Variation: September 1st, 2003
Gene Model: March 2nd, 2016
3 months agoexpb4 beta expansin4:
7.02
GRMZM2G154178
Du, XM et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20018     Reference: April 20th, 2020
Variation: May 31st, 2010
Gene Model: March 2nd, 2016
3 months agoIDP851  :
4.06
GRMZM2G119258
    Variation: March 31st, 2005
Gene Model: April 20th, 2020
3 months agoIDP325  :
4.06
GRMZM2G043414
    Variation: March 31st, 2005
Gene Model: April 19th, 2020
3 months agoIDP753  :
4.06
GRMZM5G813909
    Variation: March 31st, 2005
Gene Model: April 19th, 2020
3 months agoeps1 enolpyruvylshikimate phosphate synthase1: unpubl sequence
9.07
GRMZM5G877500
Mahmoud, M et al. 2020. Plants 9:523     Reference: April 18th, 2020
Gene Product: April 18th, 2020
Variation: November 15th, 2018
Gene Model: July 27th, 2016
3 months agopep3 phosphoenolpyruvate carboxylase3: possibly duplicate gene; both pep2 and pep3 hybridize to a C3 PEPCase isozyme genomic probe, p-H1(lambda)22 and to root PEPCase cDNA.
4.08
GRMZM2G473001
Mahmoud, M et al. 2020. Plants 9:523     Reference: April 18th, 2020
Gene Product: September 1st, 2003
Variation: April 10th, 2015
Gene Model: August 13th, 2014
3 months agomate4 multidrug and toxic compound extrusion4: Sorghum ortholog: Sb03g012960
3.04
GRMZM2G080450
Mahmoud, M et al. 2020. Plants 9:523     Reference: April 18th, 2020
Gene Product: August 17th, 2015
Gene Model: August 17th, 2015
3 months agomate2 multidrug and toxic compound extrusion2: Is or is very tightly linked to a QTL that confers aluminum tolerance in lines (Maron et al 2010)
 
GRMZM2G170128
Mahmoud, M et al. 2020. Plants 9:523     Reference: April 18th, 2020
Gene Product: August 17th, 2015
Variation: August 17th, 2015
Gene Model: August 17th, 2015
3 months agomate3 multidrug and toxic compound extrusion3: Sorghum ortholog: Sb01g042740
 
GRMZM2G163154
Mahmoud, M et al. 2020. Plants 9:523   LOC_Os03g11734 (MSU/TIGR) Reference: April 18th, 2020
Gene Product: August 17th, 2015
Gene Model: August 17th, 2015
3 months agomate5 multidrug and toxic compound extrusion5: Sorghum ortholog: Sb05g000630
 
GRMZM5G890665
Mahmoud, M et al. 2020. Plants 9:523   LOC_Os12g01580 (MSU/TIGR) Reference: April 18th, 2020
Gene Product: August 17th, 2015
Gene Model: August 17th, 2015
3 months agophos2 phosphate transporter2:
 
GRMZM2G466545
Mahmoud, M et al. 2020. Plants 9:523   AT3G23430 (TAIR) Reference: April 18th, 2020
Gene Product: February 27th, 2016
Variation: February 27th, 2016
Gene Model: February 27th, 2016
3 months agophos3 phosphate transporter3:
 
GRMZM5G801969
Mahmoud, M et al. 2020. Plants 9:523   LOC_Os02g56510 (MSU/TIGR) Reference: April 18th, 2020
Gene Product: February 27th, 2016
Variation: September 13th, 2017
Gene Model: September 13th, 2017
3 months agozip6 zinc-regulated, iron-regulated transporter-like protein6:
 
GRMZM2G034551
Mahmoud, M et al. 2020. Plants 9:523     Reference: April 18th, 2020
Gene Product: June 5th, 2019
Gene Model: June 5th, 2019
3 months agoIDP2421  :
4.06
GRMZM2G146786
    Variation: March 31st, 2005
Gene Model: April 18th, 2020
3 months agocsu716  :
4.05
GRMZM2G045944
    Variation: September 1st, 2003
Gene Model: April 17th, 2020
3 months agoumc1548  :
4.05
GRMZM2G065908
    Variation: September 1st, 2003
Gene Model: April 17th, 2020
3 months agoCL65845_1  :
4.05
GRMZM2G043075
    Variation: September 25th, 2007
Gene Model: April 17th, 2020
3 months agocsu902  :
4.05
GRMZM2G359102
    Variation: September 1st, 2003
Gene Model: April 16th, 2020
3 months agocsu1026  :
4.05
GRMZM2G169207
Baysdorfer, C. 1996. Nucleotide sequence submission to dbEST     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: April 16th, 2020
3 months agoanph1 anther pollen histone1: encodes the most abundant H3 in maize sperm; also predominantly expressed in anthers
 
GRMZM2G145758
Chen, JY, et al. 2017. Plant Cell. 0:doi: 10.1105/tpc.17.00099   AT4G40030 (TAIR) Reference: October 4th, 2017
Gene Product: September 1st, 2003
Gene Model: April 16th, 2020
3 months agosert2 serrate ortholog2:
4.05
GRMZM2G377165
Prigge, MJ; Wagner, DR. 2001. Plant Cell 13:1263-1280   AT2G27100 (TAIR) Reference: April 15th, 2020
Gene Product: December 6th, 2019
Variation: September 1st, 2003
Gene Model: June 7th, 2018
3 months agosert1 serrate ortholog1:
 
GRMZM2G132780
Prigge, MJ; Wagner, DR. 2001. Plant Cell 13:1263-1280   AT2G27100 (TAIR) Reference: April 15th, 2020
Gene Product: December 6th, 2019
Gene Model: April 15th, 2020
3 months agosert3 serrate ortholog3:
 
GRMZM2G156099
Prigge, MJ; Wagner, DR. 2001. Plant Cell 13:1263-1280   AT2G27100 (TAIR) Reference: April 15th, 2020
Gene Product: December 6th, 2019
Gene Model: April 15th, 2020
3 months agosert4 serrate ortholog4:
 
GRMZM5G817439
Prigge, MJ; Wagner, DR. 2001. Plant Cell 13:1263-1280   AT2G27100 (TAIR) Reference: April 15th, 2020
Gene Product: December 6th, 2019
Gene Model: April 15th, 2020
4 months agolpa2 low phytic acid2: low phytic acid
1.05
GRMZM2G456626
Singh, A et al. 2020. Sci. Rep. 10:6324     Reference: April 14th, 2020
Gene Product: April 22nd, 2013
Variation: April 22nd, 2013
Gene Model: April 23rd, 2013
Recommended by Ed Coe:
January 8th, 2008
4 months agoIDP476  :
4.05
GRMZM2G112050
    Variation: March 31st, 2005
Gene Model: April 14th, 2020
4 months agoIDP68  :
4.05
GRMZM2G131595
    Variation: March 31st, 2005
Gene Model: April 14th, 2020
4 months agoIDP2558  :
4.04
GRMZM2G449355
    Variation: March 31st, 2005
Gene Model: April 13th, 2020
4 months agoIDP454  :
4.04
GRMZM2G090010
    Variation: March 31st, 2005
Gene Model: April 13th, 2020
4 months agoumc1217  :
 
GRMZM2G001375
    Variation: September 1st, 2003
Gene Model: April 12th, 2020
4 months agoumc1821  :
4.03
GRMZM2G139880
    Variation: September 1st, 2003
Gene Model: April 12th, 2020
4 months agoIDP274  :
4.03
GRMZM2G117609
    Variation: March 31st, 2005
Gene Model: April 12th, 2020
4 months agoIDP388  :
4.03
GRMZM2G574782
    Variation: March 31st, 2005
Gene Model: April 12th, 2020
4 months agopco130460  :
4.03
GRMZM2G030463
    Variation: September 25th, 2007
Gene Model: April 11th, 2020
4 months agoIDP483  :
4.01
GRMZM2G165208
    Variation: March 31st, 2005
Gene Model: April 11th, 2020
4 months agoIDP85  :
4.02
GRMZM2G133756
    Variation: March 31st, 2005
Gene Model: April 11th, 2020
4 months agoumc2048  :
3.09
GRMZM2G319878
    Variation: February 25th, 2007
Gene Model: April 10th, 2020
4 months agoumc1286  :
3.07
GRMZM2G425249
    Variation: September 1st, 2003
Gene Model: April 8th, 2020
4 months agocl23834_1  :
3.07
GRMZM2G005082
    Variation: September 25th, 2007
Gene Model: April 7th, 2020
4 months agogpm649  :
3.07
GRMZM2G128688
    Variation: September 25th, 2007
Gene Model: April 7th, 2020
4 months agocsu690  :
3.06
GRMZM2G138800
    Variation: September 1st, 2003
Gene Model: April 6th, 2020
4 months agosm1 salmon silks1: silks salmon color with P1-rr and P1-wr, brown with P1-ww
6.05 - 6.05
GRMZM2G031311
Kost, MA et al. 2020. Evolutionary Applications doi: 10.1111/eva.12954     Reference: April 6th, 2020
Gene Product: May 26th, 2016
Variation: May 26th, 2016
Gene Model: May 26th, 2016
4 months agochn1 chitinase chem5: cDNA derived from a library originating from a mercuric chloride treated line, INRA258; pathogenesis-related protein (Nasser 1988) induced by fungal infection and other stresses
3.08
GRMZM2G453805
Zhu, Y-X et al. 2020. Int J Mol Sci 21:2529     Reference: April 6th, 2020
Gene Product: September 1st, 2003
Variation: November 30th, 2007
Gene Model: June 21st, 2015
4 months agocsu471  : simiilar to Arabidopsis metallophosphatase domain-containing protein
9.02
GRMZM2G109720
Kost, MA et al. 2020. Evolutionary Applications doi: 10.1111/eva.12954     Reference: April 6th, 2020
Variation: September 1st, 2003
Gene Model: March 1st, 2018
4 months agocncr1 cinnamoyl CoA reductase1: Mutant results in plants with improved cell wall digestibility
1.07
GRMZM2G131205
Kost, MA et al. 2020. Evolutionary Applications doi: 10.1111/eva.12954     Reference: April 6th, 2020
Gene Product: September 1st, 2003
Variation: May 5th, 2017
Gene Model: June 23rd, 2016
4 months agoomt2 Caffeoyl CoA O-methyltransferase2:
9.02
GRMZM2G099363
Zhu, Y-X et al. 2020. Int J Mol Sci 21:2529     Reference: April 6th, 2020
Gene Product: January 5th, 2014
Variation: May 13th, 2016
Gene Model: September 17th, 2014
4 months agochi1 chalcone flavanone isomerase1: genomic sequence, gene-specific probe, transcript defined by S1-nuclease protection analysis
1.11
GRMZM2G155329
Kost, MA et al. 2020. Evolutionary Applications doi: 10.1111/eva.12954     Reference: April 6th, 2020
Gene Product: May 8th, 2012
Variation: October 10th, 2012
Gene Model: May 9th, 2012
4 months agocsu180  : single copy, novel leaf cDNA sequence
3.06
AC213654.3_FG001
Baysdorfer, C. 1994. cDNA sequence submission to dbEST     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: April 6th, 2020
4 months agotgd1 dTDP-glucose dehydratase homolog csu219: leaf cDNA csu219, 5' sequence similar to DTDP-glucose dehydratase
1.03
GRMZM2G044027
Kost, MA et al. 2020. Evolutionary Applications doi: 10.1111/eva.12954     Reference: April 6th, 2020
Gene Product: September 1st, 2003
Variation: February 4th, 2015
Gene Model: February 4th, 2015
4 months agoAY110631  :
4.08
GRMZM2G439311
Zhu, Y-X et al. 2020. Int J Mol Sci 21:2529     Reference: April 6th, 2020
Variation: July 29th, 2004
Gene Model: April 17th, 2018
4 months agoaldh5 aldehyde dehydrogenase5: cDNA similar to rf2 (prf2d-exprA7); complements E. coli
3.09
GRMZM2G097706
Kost, MA et al. 2020. Evolutionary Applications doi: 10.1111/eva.12954     Reference: April 6th, 2020
Gene Product: June 28th, 2005
Variation: June 20th, 2012
Gene Model: September 30th, 2015
4 months agobx8 benzoxazinone synthesis8: cytosolic glucosyltransferase; synthesis of cyclic hydroxamates/DIMBOA; insect resistance in young seedlings
4.01
GRMZM2G085054
Kost, MA et al. 2020. Evolutionary Applications doi: 10.1111/eva.12954     Reference: April 6th, 2020
Gene Product: October 20th, 2011
Variation: October 31st, 2011
Gene Model: October 20th, 2011
4 months agofls2 flavonol synthase2: Tightly linked tandem duplication of fls1
 
GRMZM2G069298
Kost, MA et al. 2020. Evolutionary Applications doi: 10.1111/eva.12954     Reference: April 6th, 2020
Gene Product: October 10th, 2012
Gene Model: October 9th, 2012
4 months agofnsi1 flavone synthase typeI1: Encodes a flavone synthase that is of the soluble Fe2+/2- oxoglutarate-dependent dioxygenase class
 
GRMZM2G099467
Kost, MA et al. 2020. Evolutionary Applications doi: 10.1111/eva.12954   AT5G24530 (TAIR) Reference: April 6th, 2020
Gene Product: August 15th, 2015
Variation: August 14th, 2015
Gene Model: August 14th, 2015
4 months agofnsi2 flavone synthase typeI2: Encodes a flavone synthase that is of the soluble Fe2+/2- oxoglutarate-dependent dioxygenase class
 
GRMZM2G475380
Kost, MA et al. 2020. Evolutionary Applications doi: 10.1111/eva.12954   AT5G24530 (TAIR) Reference: April 6th, 2020
Gene Product: August 15th, 2015
Gene Model: August 14th, 2015
4 months agohct1 hydroxycinnamoyltransferase1: up-regulated in the Rp1-D21 mutant lines; colocalized with the SNP associated with Rp1-D21-induced HR
 
GRMZM2G061806
Zhu, Y-X et al. 2020. Int J Mol Sci 21:2529     Reference: April 6th, 2020
Gene Product: November 7th, 2015
Gene Model: November 7th, 2015
4 months agohct2 hydroxycinnamoyltransferase2: up-regulated in the Rp1-D21 mutant lines; colocalized with the SNP associated with Rp1-D21-induced HR
 
GRMZM2G114918
Zhu, Y-X et al. 2020. Int J Mol Sci 21:2529     Reference: April 6th, 2020
Gene Product: November 7th, 2015
Gene Model: November 7th, 2015
4 months agoomt3 Caffeoyl CoA O-methyltransferase3:
 
GRMZM2G077486
Kost, MA et al. 2020. Evolutionary Applications doi: 10.1111/eva.12954     Reference: April 6th, 2020
Gene Product: January 5th, 2014
Gene Model: May 13th, 2016
4 months agohct10 hydroxycinnamoyltransferase10:
 
GRMZM2G034360
Kost, MA et al. 2020. Evolutionary Applications doi: 10.1111/eva.12954     Reference: April 6th, 2020
Gene Product: November 7th, 2015
Gene Model: May 18th, 2016
4 months agohct12 hydroxycinnamoyltransferase12:
 
GRMZM2G179703
Kost, MA et al. 2020. Evolutionary Applications doi: 10.1111/eva.12954     Reference: April 6th, 2020
Gene Product: November 7th, 2015
Gene Model: May 18th, 2016
4 months agohct13 hydroxycinnamoyltransferase13:
 
GRMZM2G129266
Kost, MA et al. 2020. Evolutionary Applications doi: 10.1111/eva.12954     Reference: April 6th, 2020
Gene Product: November 7th, 2015
Gene Model: May 18th, 2016
4 months agoufgt3 UDP-flavone-glycosyltransferase3:
 
GRMZM2G063550
Kost, MA et al. 2020. Evolutionary Applications doi: 10.1111/eva.12954     Reference: April 6th, 2020
Gene Product: August 30th, 2018
Gene Model: August 30th, 2018
4 months agoGRMZM2G050234  :
 
GRMZM2G050234
Kost, MA et al. 2020. Evolutionary Applications doi: 10.1111/eva.12954     Reference: April 6th, 2020
Variation: November 21st, 2019
Gene Model: November 21st, 2019
4 months agoAY107053  :
6.05
   Kost, MA et al. 2020. Evolutionary Applications doi: 10.1111/eva.12954     Reference: April 6th, 2020
Variation: September 25th, 2007
4 months agoIDP750  :
2.05
GRMZM2G116812
Zhu, Y-X et al. 2020. Int J Mol Sci 21:2529     Reference: April 6th, 2020
Variation: March 31st, 2005
Gene Model: February 19th, 2019
4 months agoIDP2348  : similar to pinoid-binding protein 1 of A. thaliana
3.06
GRMZM2G062283
Zhu, Y-X et al. 2020. Int J Mol Sci 21:2529     Reference: April 6th, 2020
Variation: March 31st, 2005
Gene Model: February 25th, 2019
4 months agohct11 hydroxycinnamoyltransferase11:
7.02
GRMZM2G156296
Kost, MA et al. 2020. Evolutionary Applications doi: 10.1111/eva.12954     Reference: April 6th, 2020
Gene Product: November 7th, 2015
Variation: March 31st, 2005
Gene Model: May 18th, 2016
4 months agoIDP1436  :
8.06
GRMZM5G805585
Kost, MA et al. 2020. Evolutionary Applications doi: 10.1111/eva.12954     Reference: April 6th, 2020
Variation: March 31st, 2005
Gene Model: September 3rd, 2019
4 months agoaldh2 aldehyde dehydrogenase2: cDNA similar to rf2; transgene in E. coli shows aldehyde dehydrogenase activity, but unable to complement the ALDH deficient E. coli mutant; mitochondrial location inferred from presence of leader sequence
4.06
GRMZM2G125268
Kost, MA et al. 2020. Evolutionary Applications doi: 10.1111/eva.12954     Reference: April 6th, 2020
Gene Product: September 1st, 2003
Variation: May 13th, 2009
Gene Model: September 30th, 2015
4 months agohct6 hydroxycinnamoyltransferase6: up-regulated in the Rp1-D21 mutant lines
5.05
   Kost, MA et al. 2020. Evolutionary Applications doi: 10.1111/eva.12954     Reference: April 6th, 2020
Gene Product: November 7th, 2015
4 months agoumc1400  :
3.05 - 3.06
GRMZM2G093119
    Variation: September 1st, 2003
Gene Model: April 5th, 2020
4 months agoumc1954  :
3.05
GRMZM2G179465
    Variation: September 1st, 2003
Gene Model: April 4th, 2020
4 months agocsu268  :
3.05
GRMZM5G801369
Baysdorfer, C. 1994. cDNA sequence submission to dbEST     Reference: September 1st, 2003
Variation: September 1st, 2003
Gene Model: April 4th, 2020
4 months agomlo8 barley mlo defense gene homolog8: one of 9 seven-transmembrane homologues to barley powdery mildew defense response gene
6.05
GRMZM5G881803
Wang, YL et al. 2020. G3 pp.doi: 10.1534/g3.120.401069     Reference: April 3rd, 2020
Gene Model: September 4th, 2014
Recommended by Marty Sachs:
March 7th, 2007
4 months agopzb01301  :
10.02
   Yan, Z et al. 2020. J Plant Physiol 248:153158     Reference: April 3rd, 2020
Variation: December 31st, 2017
4 months agogpa1 glyceraldehyde-3-phosphate dehydrogenase1: chloroplastic, A subunit; cDNA subclone GAPA1S (aka umc188) probes one site on 2S (correction from previous maps); two pseudogenes have been identified, and leaf cDNA csu140 hybridizes to 2 other bands
8.03
   Yan, Z et al. 2020. J Plant Physiol 248:153158     Reference: April 3rd, 2020
Gene Product: September 1st, 2003
Variation: April 12th, 2013
4 months agossu1 ribulose bisphosphate carboxylase small subunit1: probed locus; SSRs phi092,phi093
4.08
   Yan, Z et al. 2020. J Plant Physiol 248:153158     Reference: April 3rd, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
4 months agopsb29 photosystem II subunit29:
7.04
GRMZM2G033885
Yan, Z et al. 2020. J Plant Physiol 248:153158     Reference: April 3rd, 2020
Gene Product: September 1st, 2003
Variation: January 8th, 2015
Gene Model: January 8th, 2015
4 months agooec2 oxygen evolving complex2:
2.03
GRMZM2G021617
Yan, Z et al. 2020. J Plant Physiol 248:153158     Reference: April 3rd, 2020
Variation: February 6th, 2015
Gene Model: October 13th, 2018
4 months agoumc1300  :
3.05
GRMZM2G046061
    Variation: September 1st, 2003
Gene Model: April 3rd, 2020
4 months agogpb1 glyceraldehyde phosphate dehydrogenase B1: leaf cDNA csu152 similar to Arabidopsis GapB
1.01
GRMZM5G845611
Yan, Z et al. 2020. J Plant Physiol 248:153158     Reference: April 3rd, 2020
Gene Product: September 1st, 2003
Variation: April 18th, 2006
Gene Model: April 12th, 2013
4 months agopdk1 pyruvate, orthophosphate dikinase1: cDNA, genomic and peptide sequences; microsatellite mapped (SSRs phi025, phi078, phi081; nc012 ); cytosolic or plastidic, dependent on transcript processingmutant seedlings are pale green and lethal once kernel reserves are exhaused, even when plants were grown under 2% CO2
6.05
GRMZM2G306345
Yan, Z et al. 2020. J Plant Physiol 248:153158     Reference: April 3rd, 2020
Gene Product: July 28th, 2014
Variation: April 18th, 2018
Gene Model: November 21st, 2012
4 months agotha1 thylakoid assembly1: Required for thylakoid protein targeting via the cpSec pathway. SecA homolog. (A. Barkan, 2015)pale green, high chlorophyll fluorescence, seedling lethat; thylakoid protein targeting by sec pathway
3.04
GRMZM5G880102
Belcher, S et al. 2015. Biochem Biophys Acta 1847:1004-1016   AT4G01800 (TAIR)
LOC_Os01g21820 (MSU/TIGR)
Os01g0321300 (Gramene)
Reference: December 1st, 2015
Gene Product: July 22nd, 2009
Variation: June 25th, 2004
Gene Model: April 3rd, 2020
4 months agopsad1 photosystem I subunit d1: Designated from Zhao,Y.Y. and Bogorad,L. unpublished submission to GenBank
5.01
GRMZM2G024150
Yan, Z et al. 2020. J Plant Physiol 248:153158     Reference: April 3rd, 2020
Gene Product: September 1st, 2003
Variation: December 19th, 2014
Gene Model: December 19th, 2014
4 months agocol12 2C2-CO-like-transcription factor 12: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.NCBI: zinc finger protein CONSTANS-LIKE 16
5.07
GRMZM2G041991
Yan, Z et al. 2020. J Plant Physiol 248:153158     Reference: April 3rd, 2020
Gene Product: September 1st, 2003
Variation: March 31st, 2017
Gene Model: March 31st, 2017
4 months agooec33 oxygen evolving complex, 33kDa subunit: (was umc172) cDNA identified by hybrid-selection, in vitro translation and immunoprecipitation with antisera against spinach OEC33
6.02
GRMZM2G175562
Yan, Z et al. 2020. J Plant Physiol 248:153158     Reference: April 3rd, 2020
Gene Product: September 1st, 2003
Variation: September 16th, 2014
Gene Model: September 16th, 2014
4 months agogrftf2 GRF-transcription factor 2: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.07
   Yan, Z et al. 2020. J Plant Physiol 248:153158     Reference: April 3rd, 2020
Variation: September 25th, 2007
4 months agohdt102 histone deacetylase102:
8.05
GRMZM2G100146
Yan, Z et al. 2020. J Plant Physiol 248:153158     Reference: April 3rd, 2020
Gene Product: February 12th, 2020
Variation: November 25th, 2008
Gene Model: July 27th, 2016
4 months agohxa102 histone acetyltransferase complex component102:
 
GRMZM2G177974
Yan, Z et al. 2020. J Plant Physiol 248:153158     Reference: April 3rd, 2020
Gene Product: August 28th, 2017
Variation: August 28th, 2017
Gene Model: August 28th, 2017
4 months agoms*-305 male sterile*-305:
 
   Wang, Y et al. 2015. Israel Journal of Plant Sciences pp.DOI:10.1080/07929978.2015.1075316     Reference: August 24th, 2015
Variation: April 3rd, 2020
4 months agocdpk15 calcium dependent protein kinase15:
 
GRMZM2G441511
Wang, YL et al. 2020. G3 pp.doi: 10.1534/g3.120.401069     Reference: April 3rd, 2020
Gene Product: December 3rd, 2013
Gene Model: January 10th, 2018
4 months agoa2 anthocyaninless2: like a1, but red pericarp with P1-rr
5.03
   Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: June 7th, 2012
Variation: September 1st, 2003
4 months agobz2 bronze2: like bz1; anthers not fluorescent; an1-6923 mutation includes deletion for Bz2; encodes a glutathione S-transferase conjugating anthocyanins into the vacuole
1.08
   Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: September 1st, 2003
Variation: March 31st, 2008
4 months agod8 dwarf plant8: Dominant D8 plants resemble d1; extreme alleles not responsive to gibberellins.
1.09
GRMZM2G144744
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: February 12th, 2007
Variation: August 29th, 2007
Gene Model: May 11th, 2011
4 months agog2 golden plant2: (aka g5, pg14, v19, pg-m, bsd1) golden pale-green, weak plants; sheaths whitish yellow-green; pg-m (now g2-pg14::I) of Peterson is a mutable allele that responds to En; small bundle sheath plastids; SSR umc2101, umc2102, umc2103, umc2104, umc2105, umc2106, umc2107, umc2108.pale green seedling lethal, reduced Rubisco and NADP-malic enzyme, small bundle sheath plastids
3.00 - 3.01
GRMZM2G087804
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: July 11th, 2019
Variation: October 24th, 2017
Gene Model: August 30th, 2013
4 months agopl1 purple plant1: Pl1 plant tissues have light-independent pigment, pl1 blue light-dependent; Pl1-Bh1, colored patches in c1 aleurone and in plant; transcriptional activator for flavonoid genes; SSR phi031, nc009, nc010. umc1014
6.04
   Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: June 16th, 2015
Variation: March 28th, 2013
4 months agor1 colored1: regulates anthocyanin pathway; dominant R1 (S element) confers function in aleurone; dominants represented by R1-r or r1-r (P element) confer function in anthers, leaf tip, brace roots, etc.
10.06
   Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: October 13th, 2010
Variation: January 6th, 2018
4 months agoufo1 unstable factor for orange1: dominant Ufo1 plants have orange color in anthers, silks, and most other plant parts in presence of P1-wr or P1-rr; growth retarded
10.03
GRMZM2G053177
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Variation: December 19th, 2018
Gene Model: December 19th, 2018
4 months agofnr2 ferredoxin NADP reductase2:
7.01
GRMZM2G011858
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Variation: October 9th, 2009
Gene Model: September 4th, 2018
4 months agosbp22 SBP-transcription factor 22: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Liu, HJ, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.19.00934     Reference: April 2nd, 2020
Gene Product: July 5th, 2019
4 months agobzip22 bZIP-transcription factor 22: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080   AT1G43700 (TAIR) Reference: April 2nd, 2020
Gene Product: August 21st, 2018
Variation: September 24th, 2018
4 months agoris2 iron-sulfur protein2: one of two very similar cDNAs recovered by antiserum screen from B73 seedling leaf RNA, both transcribed in leaf tissue (Barkan and Walker 1994)cDNA csu271, gene specific, one of two very similar cDNAs for chloroplastic iron-sulfur protein
4.09
GRMZM2G038365
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: November 5th, 2014
Variation: November 1st, 2014
Gene Model: October 31st, 2014
4 months agoris1 iron-sulfur protein1: one of two very similar cDNAs recovered by antiserum screen from B73 seedling leaf RNA, both transcribed in leaf tissue (Barkan and Walker 1994)
5.04
GRMZM2G162748
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: November 5th, 2014
Variation: October 31st, 2014
Gene Model: October 31st, 2014
4 months agomyc7 myc transcription factor7: transcription factor induced by iron starvation; restores yeast fet3 fet4
1.05
GRMZM2G001930
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: September 14th, 2016
Variation: November 10th, 2005
Gene Model: July 28th, 2016
4 months agocol11 C2C2-CO-like-transcription factor 11: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also
2.04
GRMZM2G095598
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: June 18th, 2018
Variation: October 9th, 2018
Gene Model: June 18th, 2018
4 months agolox7 lipoxygenase7:
10.04
GRMZM2G070092
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: January 3rd, 2018
Variation: April 23rd, 2009
Gene Model: June 10th, 2014
4 months agolox11 lipoxygenase11:
5.04
GRMZM2G009479
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: January 3rd, 2018
Variation: June 10th, 2014
Gene Model: June 10th, 2014
4 months agoaos4 allene oxide synthesis4:
 
GRMZM2G072653
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: September 1st, 2003
Gene Model: October 29th, 2015
4 months agolox13 lipoxygenase13:
 
GRMZM5G822593
Zhou, P, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.20.00080     Reference: April 2nd, 2020
Gene Product: January 3rd, 2018
Gene Model: July 18th, 2017
4 months agoknr6 kernel number per row6: involved in determination of pistillate floret number and ear lengthKNR6 appears to phosphorylate an Arf GTPase-activating protein, a myelin basic protein, as well as itself. Jia et al, 2020qKNR6 was first identified as a QTL for "Kernel number per row".
 
GRMZM2G119714
Jia, HT, et al. 2020. Nature communications. 11:988     Reference: April 2nd, 2020
Gene Product: May 13th, 2014
Variation: February 20th, 2020
Gene Model: February 20th, 2020
4 months agohmt2 homocysteine S-methyltransferase 2:
 
GRMZM2G117240
Ranocha, P et al. 2001. Plant J 25:575-584     Reference: September 1st, 2003
Gene Product: July 19th, 2004
Gene Model: April 2nd, 2020
4 months agoglk1 G2-like1: g2 golden2 paralog; specifically affects mesophyll chloroplast assembly, but not bundle sheath chloroplast assembly (Wang et al 2013)
9.00
GRMZM2G026833
Li, X et al. 2020. Communications Biology 3:151     Reference: April 2nd, 2020
Gene Product: July 11th, 2019
Variation: May 9th, 2009
Gene Model: September 27th, 2012
4 months agopti1 pto-interacting1: specifically expressed in pollen and sequestered to the plasma membrane; co-localization callose was observed during stages of pollen mitosis I and pollen tube germination
3.04
GRMZM2G378547
Herrmann, MM et al. 2006. BMC Plant Biology 6:22     Reference: March 31st, 2020
Gene Product: May 13th, 2014
Gene Model: February 23rd, 2019
4 months agopti3 pto-interacting3:
 
GRMZM2G029530
Herrmann, MM et al. 2006. BMC Plant Biology 6:22     Reference: March 31st, 2020
Gene Product: May 13th, 2014
Gene Model: March 31st, 2020
4 months agopti4 pto-interacting4:
 
GRMZM2G001668
Herrmann, MM et al. 2006. BMC Plant Biology 6:22     Reference: March 31st, 2020
Gene Product: May 13th, 2014
Gene Model: March 31st, 2020
4 months agopti2 pto-interacting2:
10.03
GRMZM2G061447
Herrmann, MM et al. 2006. BMC Plant Biology 6:22     Reference: March 31st, 2020
Gene Product: May 13th, 2014
Gene Model: November 25th, 2019
4 months agoarftf25 ARF-transcription factor 25: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
8.06
GRMZM2G116557
Schneider, HM et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20003     Reference: March 30th, 2020
Variation: August 22nd, 2017
Gene Model: August 22nd, 2017
4 months agoumc1347  :
3.04
GRMZM2G096548
    Variation: September 1st, 2003
Gene Model: March 30th, 2020
4 months agoumc1350  :
6.07
GRMZM2G038284
Zhuang, YL et al. 2008. Biol Plant 52:754-758     Reference: March 30th, 2020
Variation: September 1st, 2003
Gene Model: August 29th, 2018
4 months agotcptf26 TCP-transcription factor 26: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Schneider, HM et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20003     Reference: March 30th, 2020
Gene Product: September 27th, 2019
4 months agosus1 sucrose synthase1: (was sus2, css1) sucrose synthase-1 (SUS1) of embryo and other tissues, compare sh1; SSRs phi016, 032, 042
9.04
GRMZM2G152908
Schneider, HM et al. 2020. Plant Genome pp.doi: 10.1002/tpg2.20003     Reference: March 30th, 2020
Gene Product: October 25th, 2006
Variation: February 1st, 2020
Gene Model: August 12th, 2014
4 months agocl14964_1  :
3.04
GRMZM2G151653
    Variation: September 25th, 2007
Gene Model: March 30th, 2020
4 months agoIDP876  :
3.04
GRMZM2G067223
    Variation: March 31st, 2005
Gene Model: March 29th, 2020
4 months agopco137802  :
3.04
GRMZM2G022088
    Variation: September 25th, 2007
Gene Model: March 29th, 2020
4 months agoxer1 xerico1: encodes a RING finger domain type E3 ubiquitin ligaseOver-expression improves water use efficiency and drought tolerance in transgenic maize plants through reduction in ABA8OX proteins stability and ABA degradation.
2.07
GRMZM2G018070
Brugiere, N et al. 2017. Plant Physiol pp.doi: 10.1104/pp.17.01072     Reference: September 14th, 2017
Gene Product: March 26th, 2020
Gene Model: September 14th, 2017
4 months agoxer3 xerico3: encodes a RING finger domain type E3 ubiquitin ligase
 
GRMZM2G005840
Shi, QB et al. 2019. Biochem Biophys Res Commun pp.doi: 10.1016/j.bbrc.2019.05.142     Reference: June 17th, 2019
Gene Product: March 26th, 2020
Variation: September 14th, 2017
Gene Model: September 14th, 2017
4 months agoxer2 xerico2: encodes a RING finger domain type E3 ubiquitin ligase
 
GRMZM2G393349
Brugiere, N et al. 2017. Plant Physiol pp.doi: 10.1104/pp.17.01072     Reference: September 14th, 2017
Gene Product: March 26th, 2020
Gene Model: September 14th, 2017
4 months agoxer4 xerico4: encodes a RING finger domain type E3 ubiquitin ligase
 
GRMZM2G029623
Brugiere, N et al. 2017. Plant Physiol pp.doi: 10.1104/pp.17.01072     Reference: September 14th, 2017
Gene Product: March 26th, 2020
Gene Model: September 14th, 2017
4 months agoupl14 ubiquitin-protein ligase14:
 
GRMZM2G126795
Huai, JL et al. 2020. Physiol Plant pp.doi: 10.1111/ppl.13099   AT2G32950 (TAIR) Reference: March 26th, 2020
Gene Product: March 26th, 2020
Gene Model: March 26th, 2020
4 months agoodo1 alpha keto dehydrogenase candidate1: etiolated leaf cDNA 6C02A09 (uaz215) similar to microbial TCA cycle enzyme
10.04
   Eprinstev, AT et al. 2020. Russ J Plant Physiol 67:378-385     Reference: March 25th, 2020
Gene Product: September 1st, 2003
Variation: September 25th, 2007
4 months agokgdh1 alpha-ketoglutarate dehydrogenase:
 
GRMZM2G079538
Liu, YM et al. 2019. BMC Plant Biology 19:592     Reference: December 30th, 2019
Gene Product: March 25th, 2020
Gene Model: December 30th, 2019
4 months agoogdh1 2-oxoglutarate dehydrogenase1:
 
GRMZM2G142863
Eprinstev, AT et al. 2020. Russ J Plant Physiol 67:378-385     Reference: March 25th, 2020
Gene Product: March 25th, 2020
Gene Model: March 25th, 2020
4 months agoogdh2 2-oxoglutarate dehydrogenase2:
 
   Eprinstev, AT et al. 2020. Russ J Plant Physiol 67:378-385     Reference: March 25th, 2020
Gene Product: March 25th, 2020
4 months agosaur2 small auxin up RNA2:
 
GRMZM2G156470
Knauss, S et al. 2003. The auxin-induced maize gene ZmSAUR2 encodes a short-lived nuclear protein expressed in elongating tissues. J Biol Chem 278:23936-23943     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Gene Model: March 25th, 2020
4 months agophi453121a  : similar to Arabidopsis E3 ubiquitin-protein ligase SINAT3
3.00
GRMZM2G309063
    Variation: March 28th, 2018
Gene Model: March 24th, 2020
4 months agocsu622  :
2.09
GRMZM2G001444
    Variation: September 1st, 2003
Gene Model: March 23rd, 2020
4 months agobetl1c basal endosperm transfer layer1c:
2.09
GRMZM2G082785
Hueros, C et al. 1999. Plant Physiol 121:1143-1152     Reference: September 1st, 2003
Gene Product: September 1st, 2003
Variation: September 17th, 2012
Gene Model: March 23rd, 2020
4 months agonhx7 Na+/H+ antiporter 7: silicon up-regulates expression
 
GRMZM2G098494
Luo, J et al. 2020. Biol Plant 64:200-210   AT1G14660 (TAIR) Reference: March 23rd, 2020
Gene Product: August 25th, 2018
Gene Model: August 20th, 2018
4 months agonhx9 Na+/H+ antiporter 9:
 
GRMZM2G171507
Luo, J et al. 2020. Biol Plant 64:200-210     Reference: March 23rd, 2020
Gene Product: August 25th, 2018
Gene Model: March 23rd, 2020
4 months agoIDP2586  :
2.05
GRMZM2G106604
    Variation: March 31st, 2005
Gene Model: March 23rd, 2020
4 months agoumc1126  :
2.08
GRMZM2G021610
    Variation: September 1st, 2003
Gene Model: March 22nd, 2020
4 months agoagpsl1 ADP glucose pyrophosphorylase small subunit leaf1: leaf-specific
1.07
GRMZM2G163437
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: September 1st, 2003
Variation: April 3rd, 2011
Gene Model: June 15th, 2012
4 months agouaz265b(sbe)  :
 
GRMZM2G169073
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: September 1st, 2003
Gene Model: February 7th, 2015
4 months agoss6 starch synthase6:
5.03
   Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: October 14th, 2016
4 months agoae1 amylose extender1: glassy, tarnished endosperm; high amylose content; application: highly linear starch is used for food films, fibers, and other industrial purposes
5.04
   Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: June 6th, 2011
Variation: March 20th, 2020
4 months agobt1 brittle endosperm1: mature kernel collapsed, angular, often translucent and brittle (alleles sh3, sh5)
5.04
   Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: February 24th, 2015
Variation: March 16th, 2018
4 months agodu1 dull endosperm1: glassy, tarnished endosperm; encodes a starch synthase III, that with an isoamylase-type debranching enzyme represses accumulation of phytoglycogen
10.03
GRMZM2G141399
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: October 14th, 2016
Variation: June 29th, 2015
Gene Model: February 28th, 2012
4 months agosu1 sugary1: endosperm wrinkled and translucent when dry; starch debranching enzyme I absent in developing endosperm, phytoglycogen but no debranching enzyme in germinating seeds; su1-am sugary-amylaceous; su1-st recessive starchy; application: the "sweet corn" gene - recessive kernels are creamy-sweet at milk stage
4.05
   Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: April 21st, 2016
Variation: June 6th, 2016
4 months agosu2 sugary2: endosperm glassy, translucent, sometimes wrinkled
6.04 - 6.05
   Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: October 14th, 2016
Variation: October 7th, 2010
4 months agozpu1 pullulanase-type starch debranching enzyme1: single copy, cDNA clone similar to rice sequence; SSR umc1003The zpu1 gene encodes a pullulanase-type starch debranching enzyme. Analysis of plants homozygous for the zpu1-204 mutation reveal the genes role in starch catabolism. zpu1-204 endosperm accumulate maltooligosaccharides not found in wild type plants. zpu1-204 are also deficient for linear maltooligosaccharides.
2.05
GRMZM2G158043
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: October 25th, 2011
Variation: June 29th, 2015
Gene Model: November 20th, 2014
4 months agoumc1554  :
2.07
GRMZM2G002879
    Variation: September 1st, 2003
Gene Model: March 21st, 2020
4 months agogbss1 granule-bound starch synthase1:
 
GRMZM2G008263
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: June 4th, 2008
Variation: August 4th, 2011
Gene Model: November 20th, 2014
4 months agopho1 starch phosphorylase1: amyloplast starch phosphorylase
1.10
GRMZM2G074158
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: March 26th, 2015
Gene Model: March 26th, 2015
4 months agosbe1 starch branching enzyme1: maize kernel cDNA sequence is similar to starch branching enzyme I of bacteria, encodes a putative 64-amino acid plastid transit peptide (aka sbe1)
5.03
   Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: September 1st, 2003
Variation: January 5th, 2018
4 months agosbe3 starch branching enzyme3:
8.06
GRMZM2G005298
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: June 6th, 2011
Variation: June 1st, 2011
Gene Model: September 23rd, 2018
4 months agogss1 starch synthase homolog1: endosperm cDNA 5C04B10 (uaz218), similar to pea starch synthase isoform II
5.06
GRMZM2G105791
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: September 1st, 2003
Variation: October 7th, 2010
Gene Model: July 12th, 2018
4 months agoagpll1 ADP glucose pyrophosphorylase large subunit leaf1AGPL4:
1.10
GRMZM2G391936
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: January 3rd, 2014
Variation: September 22nd, 2017
Gene Model: September 22nd, 2017
4 months agoagp2 ADP glucose pyrophosphorylase2: embryo specific counterpart to sh2
6.07 - 6.08
GRMZM2G027955
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: July 22nd, 2015
Variation: June 15th, 2012
Gene Model: June 15th, 2012
4 months agopco099353  :
2.08
GRMZM2G151826
    Variation: September 25th, 2007
Gene Model: March 21st, 2020
4 months agoiso3 isoamylase-type starch debranching enzyme3:
 
GRMZM2G150796
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: October 25th, 2011
Variation: April 7th, 2011
Gene Model: July 28th, 2016
4 months agosu4 sugary4: duplicate factor: in combination with su3 gives sugary endosperm phenotype.
6.05
GRMZM2G090905
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: October 25th, 2011
Variation: June 3rd, 2011
Gene Model: October 24th, 2011
4 months agoagpll2 ADP glucose pyrophosphorylase large subunit leaf2:
 
GRMZM2G144002
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: January 3rd, 2014
Gene Model: January 7th, 2014
4 months agoss4 starch synthase4:
 
GRMZM2G044744
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: October 14th, 2016
Gene Model: December 5th, 2015
4 months agoss7 starch synthase7:
 
   Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: October 14th, 2016
4 months agosbe4 starch branching enzyme4:
 
GRMZM2G073054
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: June 6th, 2011
Gene Model: March 20th, 2020
4 months agoss3 starch synthase3:
 
GRMZM2G121612
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: October 14th, 2016
Gene Model: March 20th, 2020
4 months agoss2 starch synthase3:
 
GRMZM5G897776
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: October 14th, 2016
Gene Model: March 20th, 2020
4 months agogbss2 granule-bound starch synthase2:
 
   Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: June 4th, 2008
4 months agoisol1 isoamylase3-like1:
 
GRMZM2G385578
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: October 25th, 2011
Gene Model: March 21st, 2020
4 months agoss1 starch synthase I: single copy endosperm specific cDNA; encoded-protein cross-reacts with antibody to granule associated starch synthase I
9.02
   Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: October 14th, 2016
Variation: October 7th, 2010
4 months agopho2 starch phoshorylase2: cytosolic starch phosphorylase inferred from data in Yu et al 2001 (MS 2015)
3.06
GRMZM2G085577
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: March 26th, 2015
Gene Model: March 26th, 2015
4 months agoagp1 ADP glucose pyrophosphorylase small subunit embryo 1: embryo cDNA that hybridizes to endosperm transcripts, distinct from sh2 and bt2 but most similar to the bt2 gene product
2.06
GRMZM2G106213
Yan, H-B et al. 2009. Theor Appl Genet 119:815-825     Reference: March 21st, 2020
Gene Product: January 3rd, 2014
Variation: November 4th, 2014
Gene Model: November 4th, 2014
4 months agoZm00001d033937  :
 
   He, W et al. 2020. Plant Mol Biol doi: 10.1007/s11103-020-0     Reference: March 20th, 2020
Gene Product: June 4th, 2008
4 months agoIDP738  :
1.10
GRMZM2G443453
Lin, M et al. 2020. G3 pp.doi: 10.1534/g3.119.400884     Reference: March 19th, 2020
Variation: March 31st, 2005
Gene Model: February 16th, 2019
4 months agomop1 mediator of paramutation1: recessive changes B' phenotype to dark, similar to B1-I
2.04
GRMZM2G042443
Vendramin, S et al. 2020. G3 doi: 10.1534/g3.119.40099     Reference: March 18th, 2020
Gene Product: August 8th, 2006
Variation: August 8th, 2006
Gene Model: April 24th, 2013
Recommended by Ed Coe:
January 8th, 2008
4 months agobx4 benzoxazinone synthesis4: endoplasmic reticulum P450 monoxygenase; synthesis of cyclic hydroxamates/DIMBOA; insect resistance in young seedlings; NAM SNP PHM1184
4.01
GRMZM2G172491
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: October 24th, 2011
Variation: October 27th, 2011
Gene Model: October 24th, 2011
4 months agosweet1a sugars will eventually be exported transporter1a:
3.06
GRMZM2G039365
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
4 months agoumc1135  :
3.07
GRMZM2G105863
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Variation: September 1st, 2003
Gene Model: March 30th, 2018
4 months agofrk2 fructokinase2:
6.00
GRMZM2G051677
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Variation: May 1st, 2010
Gene Model: July 29th, 2016
4 months agorps22a ribosomal protein S22 homolog:
9.06
GRMZM2G067303
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Variation: July 3rd, 2013
Gene Model: July 28th, 2016
4 months agoubf9 ubiquitin fusion protein9: genomic sequence, hybridizing mRNA expressed during cell division and/or cell growth; multiple copies in genome
 
GRMZM2G431821
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
Gene Model: September 24th, 2018
4 months agonactf25 NAC-transcription factor 25: Lines with a MITE insert in the promotor region are more sensitive to drought than those lacking this MITE insert.
 
   Vendramin, S et al. 2020. G3 doi: 10.1534/g3.119.40099   LOC_Os11g03300 (MSU/TIGR) Reference: March 18th, 2020
Gene Product: July 8th, 2019
Variation: September 22nd, 2015
4 months agonactf60 NAC-transcription factor 60: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Vendramin, S et al. 2020. G3 doi: 10.1534/g3.119.40099     Reference: March 18th, 2020
Gene Product: July 8th, 2019
4 months agopep4 phosphoenolpyruvate carboxylase4: cDNA for anaplerotic C3 isozyme; gene specific cDNA probe;
7.02
   Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Variation: December 27th, 2010
4 months agoelfa3 elongation factor alpha3: shares high (89-99%) nucleotide sequence identity with genes elf1a to elf1g, with a 99% sequence identity with elf1a.
6.05
GRMZM2G154218
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Variation: April 7th, 2014
Gene Model: July 27th, 2016
4 months agovpp8 vacuolar proton pump8: encodes a vacuolar H+-ATPase subunit
7.04
GRMZM2G019999
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Gene Model: August 25th, 2018
4 months agoppi1 peptidyl-prolyl isomerase1: cDNA homologous to tomato peptidyl-prolyl cis-trans isomerase
5.04
GRMZM2G326111
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: December 14th, 2014
Variation: December 18th, 2014
Gene Model: December 14th, 2014
4 months agogrx1 glutaredoxin homolog1: leaf cDNA csu40, similar to E. coli glutaredoxin
2.04 - 2.04
GRMZM2G150295
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: August 12th, 2012
Variation: August 16th, 2012
Gene Model: August 16th, 2012
4 months agohis1a histone1a: cDNA sequences, SSR umc1577
7.01
GRMZM2G401308
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: October 24th, 2017
Variation: October 31st, 2017
Gene Model: July 24th, 2015
4 months agoahh1 adenosyl homocysteine hydrolase1: endosperm cDNA 5C01H11 (uaz145) similar to plant activated methyl cycle enzyme
4.03
   Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Variation: March 29th, 2015
4 months agoeif2 elongation initiation factor2: etiolated leaf cDNA 6C02E11(uaz224) similar to eIF-2 gamma chain
7.04
GRMZM2G107654
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Variation: July 8th, 2017
Gene Model: January 13th, 2015
4 months agoAY110562  :
4.06
   Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Variation: September 25th, 2007
4 months agobhlh132 bHLH-transcription factor 132: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
3.05
GRMZM2G114873
Vendramin, S et al. 2020. G3 doi: 10.1534/g3.119.40099     Reference: March 18th, 2020
Gene Product: September 14th, 2016
Gene Model: September 12th, 2016
4 months agohon110 histone one (H1): (was H1a); mapped by electrophoretic mobility polymorphism as alh1
1.11
GRMZM2G164020
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Variation: June 25th, 2014
Gene Model: October 25th, 2013
4 months agouce7 ubiquitin conjugating enzyme7:
 
GRMZM2G053764
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: December 19th, 2019
Variation: August 23rd, 2017
Gene Model: August 23rd, 2017
4 months agogpat11 glycerol-3-phosphate acyltransferase11:
 
GRMZM2G059637
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: March 25th, 2019
Gene Model: March 25th, 2019
4 months agoaldh17 aldehyde dehydrogenase17:
5.05
GRMZM2G169458
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Gene Model: October 2nd, 2019
4 months agorps12a ribosomal proteinS12 (homolog):
6.07
GRMZM2G132929
Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: September 1st, 2003
Gene Model: December 26th, 2019
4 months agobx6 benzoxazinone synthesis6: cytosolic 2-oxoglutarate-dependent dioxygenase; synthesis of cyclohydroxamates/DIMBOA; insect resistance in young seedlings; SSR umc1232
4.01
   Wang, Y-F et al. 2020. Genomics Proteomics Bioinformatics doi: 10.1016/j.gpb.2018.05.005     Reference: March 18th, 2020
Gene Product: June 20th, 2016
Variation: April 12th, 2019
4 months agodbf1 DRE-binding protein 1:
1.07
GRMZM2G061487
Vendramin, S et al. 2020. G3 doi: 10.1534/g3.119.40099     Reference: March 18th, 2020
Gene Product: April 10th, 2013
Variation: July 27th, 2005
Gene Model: July 27th, 2016
4 months agohak14 potassium high-affinity transporter14:
7.03
GRMZM2G139931
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Variation: September 1st, 2003
Gene Model: September 10th, 2018
4 months agoumc1259  :
2.04
GRMZM2G021834
    Variation: September 1st, 2003
Gene Model: March 16th, 2020
4 months agolac2 laccase2:
6.05
GRMZM2G146152
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: August 28th, 2018
4 months agohak8 potassium high-affinity transporter8:
1.04
GRMZM2G173387
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: February 7th, 2020
4 months agolac10 laccase10:
 
GRMZM2G140527
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: May 6th, 2016
4 months agolac9 laccase9:
 
GRMZM2G132169
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: September 28th, 2016
4 months agolac3 laccase3:
 
GRMZM2G169033
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 31st, 2018
4 months agolac5 laccase5:
 
GRMZM2G367668
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 31st, 2018
4 months agolac4 laccase4:
 
GRMZM2G072780
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 31st, 2018
4 months agolac6 laccase6:
 
GRMZM2G164467
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 31st, 2018
4 months agolac11 laccase11:
 
GRMZM2G305526
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
4 months agolac12 laccase12:
 
GRMZM5G814718
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
4 months agolac13 laccase13:
 
GRMZM2G166857
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
4 months agolac14 laccase14:
 
AC234190.1_FG002
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
4 months agolac15 laccase15:
 
GRMZM2G072808
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
4 months agolac16 laccase16:
 
GRMZM5G870184
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
4 months agolac17 laccase17:
 
GRMZM2G309594
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
4 months agolac18 laccase18:
 
GRMZM2G388587
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
4 months agolac19 laccase19:
 
GRMZM2G320786
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
4 months agolac20 laccase20:
 
GRMZM5G800488
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
4 months agolac21 laccase21:
 
GRMZM2G447271
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
4 months agolac22 laccase22:
 
GRMZM2G336337
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
4 months agolac23 laccase23:
 
GRMZM2G094375
Liu, MY et al. 2020. J Genet 99:23     Reference: March 16th, 2020
Gene Product: March 31st, 2018
Gene Model: March 3rd, 2020
4 months agohak2 potassium high-affinity transporter2:
 
AC233953.1_FG005
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
4 months agohak3 potassium high-affinity transporter3:
 
GRMZM2G477457
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
4 months agohak7 potassium high-affinity transporter7:
 
GRMZM2G020766
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
4 months agohak9 potassium high-affinity transporter9:
 
GRMZM2G166738
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
4 months agohak10 potassium high-affinity transporter10:
 
GRMZM2G443728
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
4 months agohak11 potassium high-affinity transporter11:
 
GRMZM2G005040
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
4 months agohak12 potassium high-affinity transporter12:
 
GRMZM2G009353
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
4 months agohak13 potassium high-affinity transporter13:
 
GRMZM2G146140
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
4 months agohak15 potassium high-affinity transporter15:
 
GRMZM2G121063
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
4 months agohak16 potassium high-affinity transporter16:
 
GRMZM2G084486
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
4 months agohak6 potassium high-affinity transporter6:
 
GRMZM2G097505
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
4 months agohak17 potassium high-affinity transporter17:
 
GRMZM2G088964
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
4 months agohak18 potassium high-affinity transporter18:
 
GRMZM2G086389
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
4 months agohak19 potassium high-affinity transporter19:
 
GRMZM2G021725
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
4 months agohak20 potassium high-affinity transporter20:
 
GRMZM2G395267
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
4 months agohak22 potassium high-affinity transporter22:
 
GRMZM2G409771
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
4 months agohak21 potassium high-affinity transporter21:
 
GRMZM2G438960
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
4 months agohak23 potassium high-affinity transporter23:
 
GRMZM2G036916
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
4 months agohak24 potassium high-affinity transporter24:
 
GRMZM2G120163
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
4 months agohak25 potassium high-affinity transporter25:
 
GRMZM2G375116
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
4 months agohak26 potassium high-affinity transporter26:
 
   Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
4 months agohak27 potassium high-affinity transporter27:
 
GRMZM2G455817
Zhang, ZB et al. 2012. Mol Biol Rep 39:8465-8473     Reference: March 16th, 2020
Gene Product: March 12th, 2020
Gene Model: March 12th, 2020
5 months agoumc1285  :
2.07
GRMZM2G050861
    Variation: September 1st, 2003
Gene Model: March 15th, 2020
5 months agoIDP1415  : similar to Arabidopsis Glycolipid transfer protein (GLTP) family protein
2.04
GRMZM2G021834
    Variation: March 31st, 2005
Gene Model: March 15th, 2020
5 months agofax2 fatty acid export2: candidate gene for pericarp thickness
 
GRMZM2G143389
Wu, XM et al. 2020. BMC Plant Biology pp.doi: 10.1186/s12870-020-2295-8     Reference: March 14th, 2020
Gene Product: March 14th, 2020
Gene Model: March 14th, 2020
5 months agofax1 fatty acid export1:
 
GRMZM2G046529
Wu, XM et al. 2020. BMC Plant Biology pp.doi: 10.1186/s12870-020-2295-8   At3g57280 (TAIR) Reference: March 14th, 2020
Gene Product: March 14th, 2020
Gene Model: March 14th, 2020
5 months agovte4 vitamin E synthesis4:
5.06
GRMZM2G035213
Alves, ML et al. 2020. J Agric Food Chem pp.doi: 10.1021/acs.jafc.9b07190     Reference: March 7th, 2020
Gene Product: June 26th, 2013
Gene Model: June 26th, 2013
5 months agoct2 compact plant2: semi-dwarf plant, 1/3 height; shortened internodes; club tassel, fasciated ear
1.01 - 1.02
GRMZM2G064732
Zhou, ZP et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12809     Reference: March 6th, 2020
Gene Product: September 16th, 2013
Variation: September 20th, 2013
Gene Model: September 16th, 2013
5 months agoo11 opaque endosperm11: thin, opaque, somewhat shrunken kernels with greyish cast
 
GRMZM2G147685
Zhou, ZP et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12809   AT1G49770 (TAIR) Reference: March 6th, 2020
Gene Product: September 14th, 2016
Variation: February 8th, 2018
Gene Model: February 8th, 2018
5 months agotd1 thick tassel dwarf1: shortened plants, fasciated ears, increased spikelet density in tassel
5.03
GRMZM2G300133
Zhou, ZP et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12809     Reference: March 6th, 2020
Gene Product: October 22nd, 2012
Variation: October 23rd, 2012
Gene Model: October 22nd, 2012
5 months agoemp2 empty pericarp 2: germless, unfilled kernel
2.06
   Zhou, ZP et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12809     Reference: March 6th, 2020
Variation: September 21st, 2011
5 months agocadtfr5 CCAAT-DR1-transcription factor 5: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Zhou, ZP et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12809     Reference: March 6th, 2020
Gene Product: August 9th, 2016
5 months agozfl2 Zea floricaula leafy2: zfl1 and zfl2 double mutants exhibit a disruption of floral organ identity and patterning, as well as defects in inflorescence architecture and in the vegetative to reproductive phase transition.
2.02
   Zhou, ZP et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12809     Reference: March 6th, 2020
Variation: October 9th, 2014
5 months agocle7 clavata3/esr-related7: mutants have fasciated ears
 
GRMZM2G372364
Tran, QH et al. 2020. Genes 11:281     Reference: March 6th, 2020
Variation: March 6th, 2020
Gene Model: September 15th, 2016
5 months agoincw5 invertase cell wall5:
 
GRMZM2G095725
Zhou, ZP et al. 2020. Plant Breed pp.doi: 10.1111/pbr.12809   LOC_Os04g33740 (MSU/TIGR) Reference: March 6th, 2020
Gene Product: June 12th, 2018
Variation: August 16th, 2017
Gene Model: August 16th, 2017
5 months agopmei50 pectin methylesterase inhibitor50:
 
AC194254.3_FG004
Tran, QH et al. 2020. Genes 11:281     Reference: March 6th, 2020
Gene Product: January 8th, 2019
Gene Model: March 6th, 2020
5 months agowi5 wilted5: mutant plants displayed a drought-sensitive phenotype, with wilting and progressive leaf chlorosis after the 3-leaf stage
 
GRMZM2G002260
Hu, X et al. 2020. J Integr Plant Biol pp.doi: 10.1111/jipb.12923     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Variation: March 5th, 2020
Gene Model: March 4th, 2020
5 months agoadf1 actin depolymerizing factor1: pollen-specific cDNA similar to vertebrate actin polymerization/depolymerization factors
7.03
   Huang, J et al. 2020. Int J Mol Sci 21:1751     Reference: March 4th, 2020
Gene Product: September 1st, 2003
Variation: July 22nd, 2015
5 months agoadf4 Actin-depolymerizing factor 4:
6.01
   Huang, J et al. 2020. Int J Mol Sci 21:1751     Reference: March 4th, 2020
Gene Product: March 4th, 2020
5 months agoadf5 actin depolymerizing factor5:
1.03
GRMZM2G077942
Huang, J et al. 2020. Int J Mol Sci 21:1751     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Variation: March 4th, 2016
Gene Model: March 3rd, 2016
5 months agoxyl5 xylanase5: NCBI:putative glycosyl hydrolase family 10
1.03
GRMZM2G108032
Hu, X et al. 2020. J Integr Plant Biol pp.doi: 10.1111/jipb.12923     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Variation: October 29th, 2016
Gene Model: October 30th, 2016
5 months agoadf2 actin depolymerizing factor2: pollen-specific cDNA similar to vertebrate actin polymerization/depolymerization factors
7.03
GRMZM2G097122
Huang, J et al. 2020. Int J Mol Sci 21:1751     Reference: March 4th, 2020
Gene Product: September 1st, 2003
Variation: July 22nd, 2015
Gene Model: July 22nd, 2015
5 months agoxyl2 xylanase2: encoded by one or few genes.
9.06
GRMZM5G850567
Hu, X et al. 2020. J Integr Plant Biol pp.doi: 10.1111/jipb.12923     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Gene Model: October 15th, 2018
5 months agoadf3 actin depolymerizing factor3: leaf cDNA similar to vertebrate actin polymerization/depolymerization factors, not expressed in pollen; expressed in E. coli; two copies detected in Southerns and by one overgo (PCO115125a in ctg64, 1L; PCO115125b in ctg204, 5S), which are syntenous regions.
1.11
GRMZM2G060702
Huang, J et al. 2020. Int J Mol Sci 21:1751     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Variation: October 19th, 2017
Gene Model: October 19th, 2017
5 months agoadf12 actin depolymerizing factor12:
2.03
GRMZM2G064875
Huang, J et al. 2020. Int J Mol Sci 21:1751     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Gene Model: March 4th, 2020
5 months agoxyn10 xylanase/glycosyl hydrolase10:
 
GRMZM2G031004
Hu, X et al. 2020. J Integr Plant Biol pp.doi: 10.1111/jipb.12923   AT1G58370 (TAIR) Reference: March 4th, 2020
Gene Product: March 4th, 2020
Gene Model: March 24th, 2016
5 months agoxyl1 xylanase1: Encodes an endoxylanase synthesized by a tapetum mRNA; predominant protein on the surface of maize pollen
 
GRMZM2G170839
Hu, X et al. 2020. J Integr Plant Biol pp.doi: 10.1111/jipb.12923     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Variation: October 17th, 2018
Gene Model: October 15th, 2018
5 months agoadf6 actin depolymerizing factor6:
 
GRMZM2G130678
Huang, J et al. 2020. Int J Mol Sci 21:1751     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Gene Model: March 4th, 2020
5 months agoadf8 actin depolymerizing factor8:
 
GRMZM2G147775
Huang, J et al. 2020. Int J Mol Sci 21:1751     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Gene Model: March 4th, 2020
5 months agoadf9 actin depolymerizing factor9:
 
GRMZM2G108807
Huang, J et al. 2020. Int J Mol Sci 21:1751     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Gene Model: March 4th, 2020
5 months agoadf10 actin depolymerizing factor10:
 
GRMZM2G002825
Huang, J et al. 2020. Int J Mol Sci 21:1751     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Gene Model: March 4th, 2020
5 months agoadf11 actin depolymerizing factor11:
 
GRMZM2G064875
Huang, J et al. 2020. Int J Mol Sci 21:1751     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Gene Model: March 4th, 2020
5 months agoadf13 actin depolymerizing factor13:
 
GRMZM2G015127
Huang, J et al. 2020. Int J Mol Sci 21:1751     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Gene Model: March 4th, 2020
5 months agoxyl6 xylanase6:
 
AC204711.3_FG002
Hu, X et al. 2020. J Integr Plant Biol pp.doi: 10.1111/jipb.12923     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Gene Model: March 4th, 2020
5 months agoxyl9 xylanase9:
 
GRMZM2G055101
Hu, X et al. 2020. J Integr Plant Biol pp.doi: 10.1111/jipb.12923     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Gene Model: March 4th, 2020
5 months agoxyl7 xylanase7:
 
GRMZM2G058128
Hu, X et al. 2020. J Integr Plant Biol pp.doi: 10.1111/jipb.12923     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Gene Model: March 4th, 2020
5 months agoxyl4 xylanase4:
 
GRMZM2G004856
Hu, X et al. 2020. J Integr Plant Biol pp.doi: 10.1111/jipb.12923     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Gene Model: March 4th, 2020
5 months agoxyl3 xylanase3: genomic clone
9.07
GRMZM2G048375
Hu, X et al. 2020. J Integr Plant Biol pp.doi: 10.1111/jipb.12923     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Variation: April 21st, 2017
Gene Model: April 21st, 2017
5 months agoxyl8 xylanase8:
 
GRMZM2G003794
Hu, X et al. 2020. J Integr Plant Biol pp.doi: 10.1111/jipb.12923     Reference: March 4th, 2020
Gene Product: March 4th, 2020
Gene Model: March 4th, 2020
5 months agotrps6 trehalose-6-phosphate synthase6:
 
GRMZM2G304274
Acosta-Perez, P et al. 2020. Plants 9:315     Reference: March 3rd, 2020
Gene Product: September 15th, 2013
Gene Model: September 15th, 2013
5 months agonactf36 NAC-transcription factor 36: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
2.04
GRMZM2G081930
Wang, GR et al. 2020. Physiol Mol Biol Plants doi: 10.1007/s12298-020-00770-w     Reference: February 28th, 2020
Variation: September 1st, 2003
Gene Model: February 15th, 2018
5 months agonactf43 NAC-transcription factor43: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.NCBI: NAC domain-containing protein 67-like
1.05
GRMZM2G082709
Wang, GR et al. 2020. Physiol Mol Biol Plants doi: 10.1007/s12298-020-00770-w     Reference: February 28th, 2020
Variation: September 1st, 2003
Gene Model: November 15th, 2016
5 months agonactf46 NAC-transcription factor 46: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, GR et al. 2020. Physiol Mol Biol Plants doi: 10.1007/s12298-020-00770-w     Reference: February 28th, 2020
Gene Product: July 8th, 2019
5 months agonactf49 NAC-transcription factor 49: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, GR et al. 2020. Physiol Mol Biol Plants doi: 10.1007/s12298-020-00770-w     Reference: February 28th, 2020
Gene Product: July 8th, 2019
Variation: March 3rd, 2017
5 months agonactf8 NAC-transcription factor 8: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, GR et al. 2020. Physiol Mol Biol Plants doi: 10.1007/s12298-020-00770-w     Reference: February 28th, 2020
Gene Product: July 8th, 2019
5 months agonactf82 NAC-transcription factor 82: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
   Wang, GR et al. 2020. Physiol Mol Biol Plants doi: 10.1007/s12298-020-00770-w     Reference: February 28th, 2020
Gene Product: July 8th, 2019
Variation: September 30th, 2018
5 months agonactf99 NAC-transcription factor 99: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
 
GRMZM2G078954
Wang, GR et al. 2020. Physiol Mol Biol Plants doi: 10.1007/s12298-020-00770-w     Reference: February 28th, 2020
Gene Product: July 8th, 2019
Gene Model: May 28th, 2019
5 months agombd123 methyl binding domain123:
10.06
GRMZM2G119802
Qian, YX et al. 2020. Plant Biotechnol Rep doi: 10.1007/s11816-020-00607-8     Reference: February 28th, 2020
Gene Product: December 24th, 2015
Variation: December 15th, 2017
Gene Model: December 15th, 2017
5 months agonactf53 NAC-transcription factor 53: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.01
GRMZM2G059428
Wang, GR et al. 2020. Physiol Mol Biol Plants doi: 10.1007/s12298-020-00770-w     Reference: February 28th, 2020
Variation: May 6th, 2016
Gene Model: May 6th, 2016
5 months agonactf48 NAC-transcription factor 48: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models.
1.06
GRMZM2G054252
Wang, GR et al. 2020. Physiol Mol Biol Plants doi: 10.1007/s12298-020-00770-w     Reference: February 28th, 2020
Variation: January 27th, 2017
Gene Model: January 27th, 2017
5 months agombd101 methyl binding domain101:
8.04
GRMZM2G040131
Qian, YX et al. 2020. Plant Biotechnol Rep doi: 10.1007/s11816-020-00607-8     Reference: February 28th, 2020
Gene Product: December 24th, 2015
Variation: September 25th, 2007
Gene Model: December 24th, 2015
5 months agombd120 methyl binding domain120:
6.05
GRMZM2G069254
Qian, YX et al. 2020. Plant Biotechnol Rep doi: 10.1007/s11816-020-00607-8     Reference: February 28th, 2020
Gene Product: December 24th, 2015
Variation: April 27th, 2018
Gene Model: July 7th, 2015
5 months agombd106 methyl binding domain106:
1.05
GRMZM2G022365
Qian, YX et al. 2020. Plant Biotechnol Rep doi: 10.1007/s11816-020-00607-8     Reference: February 28th, 2020
Gene Product: December 24th, 2015
Variation: February 6th, 2010
Gene Model: December 24th, 2015
5 months agombd108 methyl binding domain108:
7.03
GRMZM2G168269
Qian, YX et al. 2020. Plant Biotechnol Rep doi: 10.1007/s11816-020-00607-8     Reference: February 28th, 2020
Gene Product: December 24th, 2015
Variation: September 1st, 2003
Gene Model: December 24th, 2015
5 months agombd121 methyl binding domain121:
4.08
GRMZM5G812738
Springer, N; Kaeppler, SM. 2005. Plant Physiol 138:92-104     Reference: February 3rd, 2010
Gene Product: December 24th, 2015
Variation: September 11th, 2007
Gene Model: February 28th, 2020
5 months agombd115 methyl binding domain115:
1.09
GRMZM2G157470
Qian, YX et al. 2020. Plant Biotechnol Rep doi: 10.1007/s11816-020-00607-8     Reference: February 28th, 2020
Gene Product: December 24th, 2015
Variation: February 5th, 2010
Gene Model: December 24th, 2015
5 months agombd122 methyl binding domain122:
4.04
GRMZM2G377369
Qian, YX et al. 2020. Plant Biotechnol Rep doi: 10.1007/s11816-020-00607-8     Reference: February 28th, 2020
Gene Product: December 24th, 2015
Variation: February 5th, 2010
Gene Model: February 28th, 2020
5 months agoras18A1 ras-related protein18A1:
 
GRMZM2G176677
Wang, GR et al. 2020. Physiol Mol Biol Plants doi: 10.1007/s12298-020-00770-w     Reference: February 28th, 2020
Variation: January 24th, 2011
Gene Model: July 22nd, 2014
5 months agombd103 methyl binding domain103:
 
AC217264.3_FG001
Qian, YX et al. 2020. Plant Biotechnol Rep doi: 10.1007/s11816-020-00607-8     Reference: February 28th, 2020
Gene Product: December 24th, 2015
Gene Model: February 28th, 2020
5 months agombd125 methyl binding domain125:
 
GRMZM2G090163
Qian, YX et al. 2020. Plant Biotechnol Rep doi: 10.1007/s11816-020-00607-8     Reference: February 28th, 2020
Gene Product: December 24th, 2015
Gene Model: February 28th, 2020
5 months agombd126 methyl binding domain126:
 
GRMZM2G161447
Qian, YX et al. 2020. Plant Biotechnol Rep doi: 10.1007/s11816-020-00607-8     Reference: February 28th, 2020
Gene Product: December 24th, 2015
Gene Model: February 28th, 2020
5 months agombd102 methyl binding domain102:
 
GRMZM5G847045
Qian, YX et al. 2020. Plant Biotechnol Rep doi: 10.1007/s11816-020-00607-8     Reference: February 28th, 2020
Gene Product: December 24th, 2015
Gene Model: February 28th, 2020
5 months agonactf23 NAC-transcription factor 23: Locus designated and assigned to a transcription factor family by the GRASSIUS project (Yilmaz et al 2009) , which also provided the mappings to the B73_Reference Genome sequence v2 gene models. similar to protein ATAF2 of A. thaliana
8.08
GRMZM2G068973
Wang, GR et al. 2020. Physiol Mol Biol Plants doi: 10.1007/s12298-020-00770-w     Reference: February 28th, 2020
Variation: March 31st, 2005
Gene Model: June 14th, 2019
5 months agombd113 methyl binding domain113:
10.04
GRMZM2G126545
Qian, YX et al. 2020. Plant Biotechnol Rep doi: 10.1007/s11816-020-00607-8     Reference: February 28th, 2020
Gene Product: December 24th, 2015
Variation: February 3rd, 2010
Gene Model: December 24th, 2015
5 months agombd111 methyl binding domain111:
2.07
GRMZM2G025095
Qian, YX et al. 2020. Plant Biotechnol Rep doi: 10.1007/s11816-020-00607-8     Reference: February 28th, 2020
Gene Product: December 24th, 2015
Variation: January 29th, 2010
Gene Model: December 24th, 2015
5 months agopebp2 phosphatidylethanolamine-binding protein2:
 
   Azodi, CB; Pardo, J; VanBuren, R; de los Campos, G; Shiu, SH. 2019. Plant Cell. 0:doi: 10.1105/tpc.19.00332     Reference: February 27th, 2020
Variation: December 15th, 2010
5 months agopebp4 phosphatidylethanolamine-binding protein4:
 
   Azodi, CB; Pardo, J; VanBuren, R; de los Campos, G; Shiu, SH. 2019. Plant Cell. 0:doi: 10.1105/tpc.19.00332     Reference: February 27th, 2020
Variation: December 15th, 2010
5 months agopebp5 phosphatidylethanolamine-binding protein:
 
   Azodi, CB; Pardo, J; VanBuren, R; de los Campos, G; Shiu, SH. 2019. Plant Cell. 0:doi: 10.1105/tpc.19.00332     Reference: February 27th, 2020
Variation: January 31st, 2011
5 months agopebp11 phosphatidylethanolamine-binding protein11:
 
   Doll, NM, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.19.00756     Reference: February 27th, 2020
Variation: December 10th, 2010
5 months agopebp24 phosphatidylethanolamine-binding protein24:
 
GRMZM2G440005
Azodi, CB; Pardo, J; VanBuren, R; de los Campos, G; Shiu, SH. 2019. Plant Cell. 0:doi: 10.1105/tpc.19.00332     Reference: February 27th, 2020
Variation: December 14th, 2010
Gene Model: July 28th, 2016
5 months agoid1 indeterminate growth1: requires extended growth for flowering; vegetatively totipotent with gt1 and factors for perennialism
1.08
   Azodi, CB; Pardo, J; VanBuren, R; de los Campos, G; Shiu, SH. 2019. Plant Cell. 0:doi: 10.1105/tpc.19.00332     Reference: February 27th, 2020
Gene Product: January 3rd, 2015
Variation: August 3rd, 2015
5 months agoal9 aleurone9: aleurone specific cDNA, unknown function
8.08
GRMZM2G091006
Doll, NM, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.19.00756     Reference: February 27th, 2020
Variation: October 14th, 2009
Gene Model: January 14th, 2016
5 months agosweet15a sugars will eventually be exported transporter15a:
4.05
GRMZM2G168365
Doll, NM, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.19.00756     Reference: February 27th, 2020
Gene Product: November 4th, 2015
Variation: September 1st, 2003
Gene Model: November 3rd, 2015
5 months agomads1 MADS1: transcripts detected in egg cells and invivo zygotes of maize, also expressed in synergids and antipodal cells. during flower development expressed in all ear spikelet organ primordia at intermediate stages
9.07
   Azodi, CB; Pardo, J; VanBuren, R; de los Campos, G; Shiu, SH. 2019. Plant Cell. 0:doi: 10.1105/tpc.19.00332     Reference: February 27th, 2020
Gene Product: September 1st, 2003
Variation: April 15th, 2008
5 months agolec1 LEC1 transcription factor1:
5.06
GRMZM2G011789
Doll, NM, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.19.00756     Reference: February 27th, 2020
Gene Product: August 9th, 2016
Gene Model: April 8th, 2011
5 months agozag6 agamous-like6: Encodes a MADS-box transcription factor homologous to SUPPRESSOR OF OVEREXPRESSION OF CONSTANS 1 that affects flowering time in Arabidopsis.
 
GRMZM2G026223
Azodi, CB; Pardo, J; VanBuren, R; de los Campos, G; Shiu, SH. 2019. Plant Cell. 0:doi: 10.1105/tpc.19.00332     Reference: February 27th, 2020
Variation: June 9th, 2014
Gene Model: June 9th, 2014
5 months agosweet14a sugars will eventually be exported transporter14a:
 
GRMZM2G094955
Doll, NM, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.19.00756     Reference: February 27th, 2020
Gene Product: November 4th, 2015
Gene Model: November 3rd, 2015
5 months agotin1 tiller number1: variant has multiple tillers
 
GRMZM2G059088
Zhang, X, et al. 2019. Nature communications. 10:5608     Reference: February 27th, 2020
Gene Product: December 6th, 2019
Variation: December 6th, 2019
Gene Model: December 6th, 2019
5 months agoIDP781  :
5.03
GRMZM2G020146
Doll, NM, et al. 2020. Plant Cell. 0:doi: 10.1105/tpc.19.00756     Reference: February 27th, 2020
Variation: March 31st, 2005
Gene Model: February 24th, 2020
5 months agogex1 gamete expressed1: encodes protein with a core binding site for Dof transcription factors
 
GRMZM2G388045
Chen, JY, et al. 2017. Plant Cell. 0:doi: 10.1105/tpc.17.00099   AT5G55490 (TAIR) Reference: October 4th, 2017
Gene Product: February 25th, 2020
Gene Model: February 25th, 2020
5 months agoGRMZM2G059392  :
 
GRMZM2G059392
Knauer, S, et al. 2019. Genome Res. 0:doi: 10.1101/gr.250878.119   AT3G53450 (TAIR) Reference: February 24th, 2020
Gene Product: November 21st, 2019
Variation: November 21st, 2019
Gene Model: November 21st, 2019
5 months agoGRMZM2G472643  :
 
GRMZM2G472643
Knauer, S, et al. 2019. Genome Res. 0:doi: 10.1101/gr.250878.119   AT4G14580 (TAIR) Reference: February 24th, 2020
Variation: November 21st, 2019
Gene Model: November 21st, 2019
5 months agopgd3 phosphogluconate dehydrogenase3: single copy cDNA, csu843, similar to alfalfa enzyme; pentose phosphate pathway
4.03
GRMZM2G440208
Du, HY et al. 2020. Int J Mol Sci 21:1445     Reference: February 21st, 2020
Gene Product: September 1st, 2003
Variation: February 28th, 2013
Gene Model: July 28th, 2016
5 months agosum1 siroheme uroporphyrinogen methyltransferase1:
3.09
GRMZM2G105604
Du, HY et al. 2020. Int J Mol Sci 21:1445     Reference: February 21st, 2020
Gene Product: September 1st, 2003
Variation: March 18th, 2015
Gene Model: March 18th, 2015
5 months agonnr1 nitrate reductase(NADH)1: leaf, scutellum cDNA's; flavin and cyt b domains functional in E. coli, may be allelic to nnr3
4.05
   Du, HY et al. 2020. Int J Mol Sci 21:1445     Reference: February 21st, 2020
Gene Product: September 1st, 2003
Variation: October 26th, 2010
5 months agohb1 hemoglobin1: suppression of expression associated with programmed cell death (Huang et al 2014)cDNA sequence; SSR umc1733;cloned hb gene codes for a predicted protein of 164 amino acids
9.06
GRMZM2G067402
Du, HY et al. 2020. Int J Mol Sci 21:1445     Reference: February 21st, 2020
Gene Product: February 20th, 2018
Variation: September 24th, 2010
Gene Model: May 15th, 2014
5 months agobx3 benzoxazinone synthesis3: endoplasmic reticulum monoxygenase; synthesis of cyclic hydroxamates/DIMBOA; insect resistance in young seedlings; SSR umc1017
4.01
GRMZM2G167549
Schneider, HM et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa084     Reference: February 21st, 2020
Gene Product: October 19th, 2011
Variation: November 12th, 2013
Gene Model: October 24th, 2011
5 months agogln1 glutamine synthetase1: chloroplast, gene specific cDNA probe, GS2 isoform; 6-member nuclear gene family
10.07
   Du, HY et al. 2020. Int J Mol Sci 21:1445     Reference: February 21st, 2020
Gene Product: September 1st, 2003
Variation: September 1st, 2003
5 months agofnr1 ferredoxin NADP reductase1: single or low copy; root, nitrate induced cDNA; deduced amino acid sequence >90% similar to rice FNR; produces an active FNR product in E. coli
1.11
   Du, HY et al. 2020. Int J Mol Sci 21:1445     Reference: February 21st, 2020
Gene Product: September 1st, 2003
Variation: December 7th, 2012
5 months agoAY109534  : similar to Arabidopsis phosphoglycerate/bisphosphoglycerate mutase
4.08
   Du, HY et al. 2020. Int J Mol Sci 21:1445     Reference: February 21st, 2020
Variation: September 25th, 2007
5 months agofdx6 ferredoxin6:
 
GRMZM2G106190
Du, HY et al. 2020. Int J Mol Sci 21:1445     Reference: February 21st, 2020
Gene Product: September 1st, 2003
Variation: November 18th, 2011
Gene Model: July 27th, 2016
5 months agobx11 benzoxazinone synthesis11:
 
GRMZM2G336824
Schneider, HM et al. 2020. J Exp Bot pp.doi: 10.1093/jxb/eraa084     Reference: February 21st, 2020
Gene Product: July 8th, 2013
Gene Model: July 8th, 2013
5 months agonnr4 nitrate reductase4:
 
GRMZM2G076723
Du, HY et al. 2020. Int J Mol Sci 21:1445     Reference: February 21st, 2020
Gene Product: September 1st, 2003
Gene Model: May 10th, 2018
5 months agonii1 nitrate reductase1:
 
GRMZM2G102959
Du, HY et al. 2020. Int J Mol Sci 21:1445     Reference: February 21st, 2020
Gene Product: September 1st, 2003
Gene Model: May 10th, 2018
5 months agonrt5 nitrate transport5:
 
GRMZM2G455124
Du, HY et al. 2020. Int J Mol Sci 21:1445     Reference: February 21st, 2020
Gene Product: September 1st, 2003
Gene Model: May 21st, 2019
5 months agotk1 transketolase 1:
9.03
GRMZM2G033208
Du, HY et al. 2020. Int J Mol Sci 21:1445     Reference: February 21st, 2020
Gene Product: March 11th, 2008
Variation: January 29th, 2011
Gene Model: December 21st, 2015
5 months agopgd4 phosphogluconate dehydrogenase4:
10.04
GRMZM2G177077
Du, HY et al. 2020. Int J Mol Sci 21:1445     Reference: February 21st, 2020
Gene Product: September 1st, 2003
Gene Model: September 22nd, 2018
5 months agoumc1279  :
9.00
GRMZM2G000623
    Variation: September 1st, 2003
Gene Model: February 20th, 2020
5 months agolhy1 late hypocotyl elongation protein ortholog1: myb transcription factor - core clock gene (Hayes et al. 2010)
10.03
GRMZM2G474769
Shi, Y et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00078     Reference: February 20th, 2020
Gene Product: July 31st, 2016
Variation: December 28th, 2016
Gene Model: December 28th, 2016
5 months agocca1 circadian clock associated1: myb transcription factor - clock gene
 
GRMZM2G014902
Shi, Y et al. 2020. Frontiers Plant Sci pp.doi: 10.3389/fpls.2020.00078     Reference: February 20th, 2020
Gene Product: July 31st, 2016
Variation: March 18th, 2011
Gene Model: July 30th, 2016
5 months agona1 nana plant1: short, erect dwarf; no response to gibberellins
3.06 - 3.08
GRMZM2G449033
Castorina, G; Consonni, G. 2020. Int J Mol Sci 21:E1191     Reference: February 15th, 2020
Gene Product: July 24th, 2012
Variation: December 22nd, 2016
Gene Model: December 20th, 2011
5 months agona2 nana plant2: like na1
5.03
GRMZM2G057000
Castorina, G; Consonni, G. 2020. Int J Mol Sci 21:E1191   AT3G19820 (TAIR) Reference: February 15th, 2020
Gene Product: June 13th, 2016
Variation: June 13th, 2016
Gene Model: June 13th, 2016
5 months agoumc1204  :
 
GRMZM2G164088
    Variation: September 1st, 2003
Gene Model: February 15th, 2020
5 months agoptpn1 protein tyrosine phosphatase-like nulceotidase1: encodes proten with nucleotidase activity; is activated by ABA signaling and is a key regulator of drought-promoted vitamin C production
 
GRMZM2G146819
Zhang, H et al. 2020. Molecular Plant pp.doi: 10.1016/j.molp.2020.02.005   AT3G62010 (TAIR) Reference: February 15th, 2020
Gene Product: February 15th, 2020
Gene Model: February 15th, 2020
5 months agoIDP3798  :
1.09
GRMZM2G075974
    Variation: March 31st, 2005
Gene Model: February 15th, 2020
6 months agoIDP3803  :
1.09
GRMZM2G003640
    Variation: March 31st, 2005
Gene Model: February 14th, 2020
6 months agoacc2 acetyl-CoA carboxylase2: graminicide (e.g., sethoxydim, haloxyfop) resistance; encodes acetyl-CoA carboxylase
2.04
GRMZM5G858094
Liu, X et al. 2020. bioRxiv preprint pp.doi: 10.1101/2020.02.11.943787     Reference: February 13th, 2020
Gene Product: September 1st, 2003
Variation: July 7th, 2012
Gene Model: July 7th, 2012
6 months agokcs18 3-ketoacyl-CoA synthase18:
 
GRMZM2G156620
Liu, X et al. 2020. bioRxiv preprint pp.doi: 10.1101/2020.02.11.943787     Reference: February 13th, 2020
Gene Product: November 1st, 2018
Gene Model: February 13th, 2020
6 months agokcs28 3-ketoacyl-CoA synthase28:
 
GRMZM2G164974
Liu, X et al. 2020. bioRxiv preprint pp.doi: 10.1101/2020.02.11.943787     Reference: February 13th, 2020
Gene Product: November 1st, 2018
Gene Model: February 13th, 2020
6 months agowsd1 wax ester synthase/diacylglycerol acyltransferase1:
 
GRMZM2G077375
Liu, X et al. 2020. bioRxiv preprint pp.doi: 10.1101/2020.02.11.943787     Reference: February 13th, 2020
Gene Product: July 23rd, 2018
Gene Model: February 13th, 2020

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